RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 GPR101Q96P66 508 aaPredicted RBP15.17■□□□□ 0.02
COL8A1-208ENST00000621757 USP44Q9H0E7 712 aa15.17■□□□□ 0.02
COL8A1-208ENST00000621757 VPS33BQ9H267 617 aa15.17■□□□□ 0.02
COL8A1-208ENST00000621757 RRAGCQ9HB90 399 aa15.17■□□□□ 0.02
COL8A1-208ENST00000621757 BSDC1Q9NW68 430 aaPredicted RBP15.17■□□□□ 0.02
COL8A1-208ENST00000621757 PODXL2Q9NZ53 605 aa15.17■□□□□ 0.02
COL8A1-208ENST00000621757 ANKIB1Q9P2G1 1089 aa15.17■□□□□ 0.02
COL8A1-208ENST00000621757 C6orf229H3BNL8 230 aa15.16■□□□□ 0.02
COL8A1-208ENST00000621757 UFL1O94874 794 aa15.16■□□□□ 0.02
COL8A1-208ENST00000621757 IFIT5Q13325 482 aaKnown RBP15.16■□□□□ 0.02
COL8A1-208ENST00000621757 C16orf71Q8IYS4 520 aaPredicted RBP15.16■□□□□ 0.02
COL8A1-208ENST00000621757 BICC1Q9H694 974 aaKnown RBP15.16■□□□□ 0.02
COL8A1-208ENST00000621757 TNNQ9UQP3 1299 aa15.16■□□□□ 0.02
COL8A1-208ENST00000621757 XDHP47989 1333 aa15.16■□□□□ 0.02
COL8A1-208ENST00000621757 IPO8O15397 1037 aaKnown RBP15.15■□□□□ 0.02
COL8A1-208ENST00000621757 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
COL8A1-208ENST00000621757 ATF7IPQ6VMQ6 1270 aa15.15■□□□□ 0.02
COL8A1-208ENST00000621757 ANKRD44Q8N8A2 993 aa15.15■□□□□ 0.02
COL8A1-208ENST00000621757 MPHOSPH8Q99549 860 aa15.15■□□□□ 0.02
COL8A1-208ENST00000621757 GGA1Q9UJY5 639 aa15.15■□□□□ 0.02
COL8A1-208ENST00000621757 MINPP1Q9UNW1 487 aa15.15■□□□□ 0.02
COL8A1-208ENST00000621757 SCN4AP35499 1836 aa15.15■□□□□ 0.02
COL8A1-208ENST00000621757 POTECB2RU33 542 aa15.14■□□□□ 0.01
COL8A1-208ENST00000621757 RIMBP2O15034 1052 aa15.14■□□□□ 0.01
COL8A1-208ENST00000621757 WASHC4Q2M389 1173 aa15.14■□□□□ 0.01
COL8A1-208ENST00000621757 CCDC57Q2TAC2 916 aa15.14■□□□□ 0.01
COL8A1-208ENST00000621757 RABL6Q3YEC7 729 aaPredicted RBP15.14■□□□□ 0.01
COL8A1-208ENST00000621757 L3MBTL3Q96JM7 780 aaPredicted RBP15.14■□□□□ 0.01
COL8A1-208ENST00000621757 EYA3Q99504 573 aa15.14■□□□□ 0.01
COL8A1-208ENST00000621757 VEGFAP15692 232 aaPredicted RBP15.13■□□□□ 0.01
COL8A1-208ENST00000621757 FSTL1Q12841 308 aa15.13■□□□□ 0.01
COL8A1-208ENST00000621757 TAF7LQ5H9L4 462 aa15.13■□□□□ 0.01
COL8A1-208ENST00000621757 ZKSCAN2Q63HK3 967 aa15.13■□□□□ 0.01
COL8A1-208ENST00000621757 INTS3Q68E01 1043 aaKnown RBP15.13■□□□□ 0.01
COL8A1-208ENST00000621757 GPC2Q8N158 579 aa15.13■□□□□ 0.01
COL8A1-208ENST00000621757 CLUAP1Q96AJ1 413 aa15.13■□□□□ 0.01
COL8A1-208ENST00000621757 ZNF594Q96JF6 807 aaPredicted RBP15.13■□□□□ 0.01
COL8A1-208ENST00000621757 ZNRF3Q9ULT6 936 aa15.13■□□□□ 0.01
COL8A1-208ENST00000621757 YDJCA8MPS7 323 aa15.12■□□□□ 0.01
COL8A1-208ENST00000621757 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
COL8A1-208ENST00000621757 ATP2B4P23634 1241 aa15.12■□□□□ 0.01
COL8A1-208ENST00000621757 CHRNDQ07001 517 aa15.12■□□□□ 0.01
COL8A1-208ENST00000621757 MEIS3Q99687 375 aa15.12■□□□□ 0.01
COL8A1-208ENST00000621757 DBNDD1Q9H9R9 158 aa15.12■□□□□ 0.01
COL8A1-208ENST00000621757 GJA3Q9Y6H8 435 aa15.12■□□□□ 0.01
COL8A1-208ENST00000621757 SCN9AQ15858 1988 aa15.12■□□□□ 0.01
COL8A1-208ENST00000621757 MED23Q9ULK4 1368 aa15.11■□□□□ 0.01
COL8A1-208ENST00000621757 WTIPA6NIX2 430 aaPredicted RBP15.11■□□□□ 0.01
COL8A1-208ENST00000621757 ECE2O60344 883 aa15.11■□□□□ 0.01
COL8A1-208ENST00000621757 DOK7Q18PE1 504 aa15.11■□□□□ 0.01
COL8A1-208ENST00000621757 PSME4Q14997 1843 aa15.1■□□□□ 0.01
COL8A1-208ENST00000621757 IQCA1LA6NCM1 817 aa15.1■□□□□ 0.01
COL8A1-208ENST00000621757 RAD17O75943 681 aa15.1■□□□□ 0.01
COL8A1-208ENST00000621757 CXCL9Q07325 125 aa15.1■□□□□ 0.01
COL8A1-208ENST00000621757 TMEM57Q8N5G2 664 aa15.1■□□□□ 0.01
COL8A1-208ENST00000621757 KLRG1Q96E93 195 aa15.1■□□□□ 0.01
COL8A1-208ENST00000621757 ZC3H12CQ9C0D7 883 aaKnown RBP15.1■□□□□ 0.01
COL8A1-208ENST00000621757 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
COL8A1-208ENST00000621757 ADAMTSL1Q8N6G6 1762 aa15.09■□□□□ 0.01
COL8A1-208ENST00000621757 KLRK1P26718 216 aa15.09■□□□□ 0.01
COL8A1-208ENST00000621757 SCNN1DP51172 638 aa15.09■□□□□ 0.01
COL8A1-208ENST00000621757 CIAPIN1Q6FI81 312 aa15.09■□□□□ 0.01
COL8A1-208ENST00000621757 LDHAL6AQ6ZMR3 332 aa15.09■□□□□ 0.01
COL8A1-208ENST00000621757 FTSJ3Q8IY81 847 aaKnown RBP15.09■□□□□ 0.01
COL8A1-208ENST00000621757 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
COL8A1-208ENST00000621757 LRRFIP2Q9Y608 721 aaKnown RBP15.09■□□□□ 0.01
COL8A1-208ENST00000621757 ZNF804BA4D1E1 1349 aa15.09■□□□□ 0.01
COL8A1-208ENST00000621757 ZNF646O15015 1829 aaPredicted RBP15.08■□□□□ 0.01
COL8A1-208ENST00000621757 TAF5LO75529 589 aa15.08■□□□□ 0
COL8A1-208ENST00000621757 SMC1BQ8NDV3 1235 aa15.08■□□□□ 0
COL8A1-208ENST00000621757 HELBQ8NG08 1087 aaPredicted RBP15.08■□□□□ 0
COL8A1-208ENST00000621757 KLHDC4Q8TBB5 520 aa15.08■□□□□ 0
COL8A1-208ENST00000621757 YTHDC1Q96MU7 727 aaKnown RBP15.08■□□□□ 0
COL8A1-208ENST00000621757 PUS3Q9BZE2 481 aaKnown RBP15.08■□□□□ 0
COL8A1-208ENST00000621757 TAF1DQ9H5J8 278 aaPredicted RBP15.08■□□□□ 0
COL8A1-208ENST00000621757 HACL1Q9UJ83 578 aa15.08■□□□□ 0
COL8A1-208ENST00000621757 LEMD3Q9Y2U8 911 aa15.08■□□□□ 0
COL8A1-208ENST00000621757 G3V3G9 751 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 SNAP23O00161 211 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 GNAI3P08754 354 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 POTEIP0CG38 1075 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 POTEJP0CG39 1038 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 RLBP1P12271 317 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 KCNJ4P48050 445 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 DCAF8Q5TAQ9 597 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 TXNRD3Q86VQ6 643 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 DZIP1LQ8IYY4 767 aaKnown RBP15.07■□□□□ 0
COL8A1-208ENST00000621757 JMYQ8N9B5 988 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 RCAN3Q9UKA8 241 aa15.07■□□□□ 0
COL8A1-208ENST00000621757 PSMD14O00487 310 aa15.06■□□□□ 0
COL8A1-208ENST00000621757 LMOD1P29536 600 aaPredicted RBP15.06■□□□□ 0
COL8A1-208ENST00000621757 EPHX2P34913 555 aa15.06■□□□□ 0
COL8A1-208ENST00000621757 RFX5P48382 616 aaPredicted RBP15.06■□□□□ 0
COL8A1-208ENST00000621757 GMPSP49915 693 aaPredicted RBP15.06■□□□□ 0
COL8A1-208ENST00000621757 TNIP1Q15025 636 aa15.06■□□□□ 0
COL8A1-208ENST00000621757 KCNQ5Q9NR82 932 aa15.06■□□□□ 0
COL8A1-208ENST00000621757 HDAC5Q9UQL6 1122 aa15.06■□□□□ 0
COL8A1-208ENST00000621757 IRS2Q9Y4H2 1338 aa15.06■□□□□ 0
COL8A1-208ENST00000621757 PLIN1O60240 522 aa15.05■□□□□ -0
COL8A1-208ENST00000621757 EPS15P42566 896 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms