RNA–Protein interactions for RNA: ENST00000621640.1

GTF2I-220, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-220ENST00000621640 EYA3Q99504 573 aa19.85■□□□□ 0.77
GTF2I-220ENST00000621640 ZNF408Q9H9D4 720 aa19.85■□□□□ 0.77
GTF2I-220ENST00000621640 PODXL2Q9NZ53 605 aa19.85■□□□□ 0.77
GTF2I-220ENST00000621640 SCN9AQ15858 1988 aa19.84■□□□□ 0.77
GTF2I-220ENST00000621640 PCCAP05165 728 aaPredicted RBP19.84■□□□□ 0.77
GTF2I-220ENST00000621640 TBC1D10BQ4KMP7 808 aaPredicted RBP19.84■□□□□ 0.77
GTF2I-220ENST00000621640 USP48Q86UV5 1035 aa19.84■□□□□ 0.77
GTF2I-220ENST00000621640 RPS12P25398 132 aaKnown RBP19.83■□□□□ 0.77
GTF2I-220ENST00000621640 TSPYL6Q8N831 410 aa19.83■□□□□ 0.77
GTF2I-220ENST00000621640 JARID2Q92833 1246 aaPredicted RBP19.83■□□□□ 0.77
GTF2I-220ENST00000621640 BEGAINQ9BUH8 593 aa19.83■□□□□ 0.77
GTF2I-220ENST00000621640 METTL22Q9BUU2 404 aaPredicted RBP19.83■□□□□ 0.77
GTF2I-220ENST00000621640 CWC25Q9NXE8 425 aaPredicted RBP19.83■□□□□ 0.77
GTF2I-220ENST00000621640 UFL1O94874 794 aa19.82■□□□□ 0.76
GTF2I-220ENST00000621640 HSP90B1P14625 803 aaKnown RBP19.82■□□□□ 0.76
GTF2I-220ENST00000621640 CCDC152Q4G0S7 254 aa19.82■□□□□ 0.76
GTF2I-220ENST00000621640 TSKSQ9UJT2 592 aa19.82■□□□□ 0.76
GTF2I-220ENST00000621640 PDE8AO60658 829 aa19.81■□□□□ 0.76
GTF2I-220ENST00000621640 VIL1P09327 827 aaKnown RBP19.81■□□□□ 0.76
GTF2I-220ENST00000621640 CCDC30Q5VVM6 783 aa19.81■□□□□ 0.76
GTF2I-220ENST00000621640 KRT26Q7Z3Y9 468 aa19.81■□□□□ 0.76
GTF2I-220ENST00000621640 ABHD8Q96I13 439 aa19.81■□□□□ 0.76
GTF2I-220ENST00000621640 CCDC85AQ96PX6 553 aaPredicted RBP19.81■□□□□ 0.76
GTF2I-220ENST00000621640 ANKIB1Q9P2G1 1089 aa19.81■□□□□ 0.76
GTF2I-220ENST00000621640 BRPF1P55201 1214 aaPredicted RBP19.8■□□□□ 0.76
GTF2I-220ENST00000621640 ZC3H12CQ9C0D7 883 aaKnown RBP19.8■□□□□ 0.76
GTF2I-220ENST00000621640 GGA1Q9UJY5 639 aa19.8■□□□□ 0.76
GTF2I-220ENST00000621640 ZNF609O15014 1411 aa19.79■□□□□ 0.76
GTF2I-220ENST00000621640 ADM5C9JUS6 153 aa19.79■□□□□ 0.76
GTF2I-220ENST00000621640 DDX58O95786 925 aaKnown RBP19.79■□□□□ 0.76
GTF2I-220ENST00000621640 IGKV5-2P06315 115 aa19.79■□□□□ 0.76
GTF2I-220ENST00000621640 KIF4BQ2VIQ3 1234 aa19.79■□□□□ 0.76
GTF2I-220ENST00000621640 RBM26Q5T8P6 1007 aaKnown RBP19.79■□□□□ 0.76
GTF2I-220ENST00000621640 TSR2Q969E8 191 aaKnown RBP19.79■□□□□ 0.76
GTF2I-220ENST00000621640 MAP3K2Q9Y2U5 619 aa19.79■□□□□ 0.76
GTF2I-220ENST00000621640 HUNKP57058 714 aa19.78■□□□□ 0.76
GTF2I-220ENST00000621640 CCDC184Q52MB2 194 aa19.78■□□□□ 0.76
GTF2I-220ENST00000621640 ZIC5Q96T25 663 aa19.78■□□□□ 0.76
GTF2I-220ENST00000621640 ASTN2O75129 1339 aaPredicted RBP19.77■□□□□ 0.76
GTF2I-220ENST00000621640 PI4KAP2A4QPH2 592 aa19.77■□□□□ 0.76
GTF2I-220ENST00000621640 CA12O43570 354 aa19.77■□□□□ 0.76
GTF2I-220ENST00000621640 CTSWP56202 376 aa19.77■□□□□ 0.76
GTF2I-220ENST00000621640 KSR2Q6VAB6 950 aa19.77■□□□□ 0.76
GTF2I-220ENST00000621640 ANKRD18AQ8IVF6 992 aa19.77■□□□□ 0.76
GTF2I-220ENST00000621640 PI4KAP1Q8N8J0 262 aa19.77■□□□□ 0.76
GTF2I-220ENST00000621640 XDHP47989 1333 aa19.76■□□□□ 0.75
GTF2I-220ENST00000621640 PSME4Q14997 1843 aa19.76■□□□□ 0.75
GTF2I-220ENST00000621640 ZNF280AP59817 542 aaPredicted RBP19.76■□□□□ 0.75
GTF2I-220ENST00000621640 NOGQ13253 232 aa19.76■□□□□ 0.75
GTF2I-220ENST00000621640 DCPSQ96C86 337 aaKnown RBP19.76■□□□□ 0.75
GTF2I-220ENST00000621640 CHMP4AQ9BY43 222 aa19.76■□□□□ 0.75
GTF2I-220ENST00000621640 GGA3Q9NZ52 723 aa19.76■□□□□ 0.75
GTF2I-220ENST00000621640 POLR2AP24928 1970 aaKnown RBP19.75■□□□□ 0.75
GTF2I-220ENST00000621640 WTIPA6NIX2 430 aaPredicted RBP19.75■□□□□ 0.75
GTF2I-220ENST00000621640 FAM155AB1AL88 458 aaPredicted RBP19.75■□□□□ 0.75
GTF2I-220ENST00000621640 RSBN1LQ6PCB5 846 aaPredicted RBP19.75■□□□□ 0.75
GTF2I-220ENST00000621640 GBA2Q9HCG7 927 aaPredicted RBP19.75■□□□□ 0.75
GTF2I-220ENST00000621640 G3V3G9 751 aa19.74■□□□□ 0.75
GTF2I-220ENST00000621640 CCDC27Q2M243 656 aa19.74■□□□□ 0.75
GTF2I-220ENST00000621640 CWF19L2Q2TBE0 894 aaKnown RBP19.74■□□□□ 0.75
GTF2I-220ENST00000621640 DCAF8Q5TAQ9 597 aa19.74■□□□□ 0.75
GTF2I-220ENST00000621640 TTLL11Q8NHH1 800 aa19.74■□□□□ 0.75
GTF2I-220ENST00000621640 GMLQ99445 158 aa19.74■□□□□ 0.75
GTF2I-220ENST00000621640 G2E3Q7L622 706 aa19.73■□□□□ 0.75
GTF2I-220ENST00000621640 WWC1Q8IX03 1113 aa19.73■□□□□ 0.75
GTF2I-220ENST00000621640 AGBL3Q8NEM8 1001 aa19.73■□□□□ 0.75
GTF2I-220ENST00000621640 CDC5LQ99459 802 aaKnown RBP19.73■□□□□ 0.75
GTF2I-220ENST00000621640 GREM2Q9H772 168 aa19.73■□□□□ 0.75
GTF2I-220ENST00000621640 SPEF2Q9C093 1822 aa19.72■□□□□ 0.75
GTF2I-220ENST00000621640 NEURL1BA8MQ27 555 aa19.72■□□□□ 0.75
GTF2I-220ENST00000621640 ATP2B4P23634 1241 aa19.72■□□□□ 0.75
GTF2I-220ENST00000621640 RGMBQ6NW40 437 aa19.72■□□□□ 0.75
GTF2I-220ENST00000621640 SULF1Q8IWU6 871 aa19.72■□□□□ 0.75
GTF2I-220ENST00000621640 C2orf69Q8N8R5 385 aa19.72■□□□□ 0.75
GTF2I-220ENST00000621640 STK31Q9BXU1 1019 aa19.72■□□□□ 0.75
GTF2I-220ENST00000621640 MYH3P11055 1940 aa19.72■□□□□ 0.75
GTF2I-220ENST00000621640 MED23Q9ULK4 1368 aa19.71■□□□□ 0.75
GTF2I-220ENST00000621640 TWISTNBQ3B726 338 aaPredicted RBP19.71■□□□□ 0.75
GTF2I-220ENST00000621640 CDCA5Q96FF9 252 aa19.71■□□□□ 0.75
GTF2I-220ENST00000621640 BSDC1Q9NW68 430 aaPredicted RBP19.71■□□□□ 0.75
GTF2I-220ENST00000621640 MINPP1Q9UNW1 487 aa19.71■□□□□ 0.75
GTF2I-220ENST00000621640 ZNF646O15015 1829 aaPredicted RBP19.71■□□□□ 0.75
GTF2I-220ENST00000621640 USP17L3A6NCW0 530 aa19.7■□□□□ 0.74
GTF2I-220ENST00000621640 USP17L4A6NCW7 530 aa19.7■□□□□ 0.74
GTF2I-220ENST00000621640 NEXNQ0ZGT2 675 aa19.7■□□□□ 0.74
GTF2I-220ENST00000621640 SCARF1Q14162 830 aa19.7■□□□□ 0.74
GTF2I-220ENST00000621640 ANGEL2Q5VTE6 544 aaKnown RBP19.7■□□□□ 0.74
GTF2I-220ENST00000621640 USP17L1Q7RTZ2 530 aa19.7■□□□□ 0.74
GTF2I-220ENST00000621640 PODNQ7Z5L7 613 aa19.7■□□□□ 0.74
GTF2I-220ENST00000621640 H7C1W4 665 aa19.69■□□□□ 0.74
GTF2I-220ENST00000621640 SLC4A2P04920 1241 aa19.69■□□□□ 0.74
GTF2I-220ENST00000621640 USP17L8P0C7I0 530 aa19.69■□□□□ 0.74
GTF2I-220ENST00000621640 UBE3BQ7Z3V4 1068 aa19.69■□□□□ 0.74
GTF2I-220ENST00000621640 CCDC102AQ96A19 550 aa19.69■□□□□ 0.74
GTF2I-220ENST00000621640 MYOZ2Q9NPC6 264 aa19.69■□□□□ 0.74
GTF2I-220ENST00000621640 CASP8AP2Q9UKL3 1982 aa19.69■□□□□ 0.74
GTF2I-220ENST00000621640 IL16Q14005 1332 aa19.69■□□□□ 0.74
GTF2I-220ENST00000621640 CCDC85CA6NKD9 419 aa19.68■□□□□ 0.74
GTF2I-220ENST00000621640 ZNF157P51786 506 aaPredicted RBP19.68■□□□□ 0.74
GTF2I-220ENST00000621640 MCOLN1Q9GZU1 580 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms