RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 UNC80Q8N2C7 3258 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 TIAM2Q8IVF5 1701 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 PIEZO1Q92508 2521 aa3.24□□□□□ -1.89
CPNE3-211ENST00000621526 ITGB4P16144 1822 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 LTN1O94822 1766 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 HTTP42858 3142 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 FAM177BA6PVY3 158 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 NBPF26B4DH59 902 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 PPP1R12BO60237 982 aaPredicted RBP3.23□□□□□ -1.89
CPNE3-211ENST00000621526 VCANP13611 3396 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 UBXN2AP68543 259 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 CAP1Q01518 475 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 GRAPQ13588 217 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 TTLL12Q14166 644 aaPredicted RBP3.23□□□□□ -1.89
CPNE3-211ENST00000621526 SUPT20HL1Q3ZLR7 823 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 RIC1Q4ADV7 1423 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 TJAP1Q5JTD0 557 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 SUSD4Q5VX71 490 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 NBPF10Q6P3W6 841 aaKnown RBP3.23□□□□□ -1.89
CPNE3-211ENST00000621526 RSBN1LQ6PCB5 846 aaPredicted RBP3.23□□□□□ -1.89
CPNE3-211ENST00000621526 DDX46Q7L014 1031 aaKnown RBP3.23□□□□□ -1.89
CPNE3-211ENST00000621526 MON2Q7Z3U7 1717 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 PODNQ7Z5L7 613 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 NUTM1Q86Y26 1132 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 OGFOD1Q8N543 542 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 GRAPLQ8TC17 118 aaPredicted RBP3.23□□□□□ -1.89
CPNE3-211ENST00000621526 SHISA4Q96DD7 197 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 TRIM47Q96LD4 638 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 GUCD1Q96NT3 240 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 ZCCHC17Q9NP64 241 aaKnown RBP3.23□□□□□ -1.89
CPNE3-211ENST00000621526 MYOZ2Q9NPC6 264 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 KCNQ5Q9NR82 932 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 NSFL1CQ9UNZ2 370 aaKnown RBP3.23□□□□□ -1.89
CPNE3-211ENST00000621526 COL4A5P29400 1685 aa3.23□□□□□ -1.89
CPNE3-211ENST00000621526 IBTKQ9P2D0 1353 aaPredicted RBP3.23□□□□□ -1.89
CPNE3-211ENST00000621526 LAMA3Q16787 3333 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 MRC1P22897 1456 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 ASTN2O75129 1339 aaPredicted RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 SPTBN5Q9NRC6 3674 aaKnown RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 BTBD11A6QL63 1104 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 GNAT3A8MTJ3 354 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 WNT10BO00744 389 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 ECE2O60344 883 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 TLR2O60603 784 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 FARP2O94887 1054 aaPredicted RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 TFRCP02786 760 aaKnown RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 GRK4P32298 578 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 FOXK2Q01167 660 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 MKRN3Q13064 507 aaKnown RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 MTFR1Q15390 333 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 PRAMEF18Q5VWM3 479 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 GIGYF2Q6Y7W6 1299 aaKnown RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 NECAB2Q7Z6G3 386 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 ANKLE1Q8NAG6 615 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 SH3TC2Q8TF17 1288 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 U2AF1L4Q8WU68 220 aaKnown RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 ATXN2LQ8WWM7 1075 aaKnown RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 CNKSR2Q8WXI2 1034 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 WNK4Q96J92 1243 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 MS4A4AQ96JQ5 239 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 SIN3AQ96ST3 1273 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 P2RX7Q99572 595 aaKnown RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 CDX2Q99626 313 aaPredicted RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 UTP14AQ9BVJ6 771 aaKnown RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 CRISPLD2Q9H0B8 497 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 RNF208Q9H0X6 261 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 SEMA6BQ9H3T3 888 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 PODXL2Q9NZ53 605 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 POLLQ9UGP5 575 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 SRRDQ9UH36 339 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 ANGEL1Q9UNK9 670 aaKnown RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 DLEC1Q9Y238 1755 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 CCDC88AQ3V6T2 1871 aa3.22□□□□□ -1.89
CPNE3-211ENST00000621526 COL5A3P25940 1745 aaPredicted RBP3.22□□□□□ -1.89
CPNE3-211ENST00000621526 ABCC4O15439 1325 aa3.21□□□□□ -1.89
CPNE3-211ENST00000621526 MAP3K15Q6ZN16 1313 aa3.21□□□□□ -1.89
CPNE3-211ENST00000621526 FAM205AQ6ZU69 1335 aa3.21□□□□□ -1.89
CPNE3-211ENST00000621526 ZNF609O15014 1411 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 USP17L3A6NCW0 530 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 USP17L4A6NCW7 530 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 G3V3G9 751 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 C6orf229H3BNL8 230 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 RIMBP2O15034 1052 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 USP2O75604 605 aaPredicted RBP3.21□□□□□ -1.9
CPNE3-211ENST00000621526 NTSR2O95665 410 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 CCL5P13501 91 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 GTF2A2P52657 109 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 RPS8P62241 208 aaKnown RBP3.21□□□□□ -1.9
CPNE3-211ENST00000621526 LACTBP83111 547 aaPredicted RBP3.21□□□□□ -1.9
CPNE3-211ENST00000621526 NEUROD1Q13562 356 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 SF3B3Q15393 1217 aaKnown RBP3.21□□□□□ -1.9
CPNE3-211ENST00000621526 DOK7Q18PE1 504 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 NBPF9Q3BBW0 867 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 DCAF8Q5TAQ9 597 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 C17orf99Q6UX52 265 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 C3orf67Q6ZVT6 689 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 USP17L1Q7RTZ2 530 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 APOBEC3FQ8IUX4 373 aaKnown RBP3.21□□□□□ -1.9
CPNE3-211ENST00000621526 ANKRD13AQ8IZ07 590 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 MTMR14Q8NCE2 650 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms