RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 ZC3H15Q8WU90 426 aaKnown RBP14.39□□□□□ -0.11
TARDBP-221ENST00000619555 MAP3K2Q9Y2U5 619 aa14.39□□□□□ -0.11
TARDBP-221ENST00000619555 TLL2Q9Y6L7 1015 aa14.39□□□□□ -0.11
TARDBP-221ENST00000619555 POLR2AP24928 1970 aaKnown RBP14.38□□□□□ -0.11
TARDBP-221ENST00000619555 PDE8AO60658 829 aa14.38□□□□□ -0.11
TARDBP-221ENST00000619555 DDX58O95786 925 aaKnown RBP14.38□□□□□ -0.11
TARDBP-221ENST00000619555 HSP90B1P14625 803 aaKnown RBP14.38□□□□□ -0.11
TARDBP-221ENST00000619555 SAMD7Q7Z3H4 446 aa14.38□□□□□ -0.11
TARDBP-221ENST00000619555 DPF2Q92785 391 aa14.38□□□□□ -0.11
TARDBP-221ENST00000619555 EYA3Q99504 573 aa14.38□□□□□ -0.11
TARDBP-221ENST00000619555 RTL9Q8NET4 1388 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 PI4KAP2A4QPH2 592 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 EGFRP00533 1210 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 HSPA8P11142 646 aaKnown RBP14.37□□□□□ -0.11
TARDBP-221ENST00000619555 ECE1P42892 770 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 MAP2K1Q02750 393 aaPredicted RBP14.37□□□□□ -0.11
TARDBP-221ENST00000619555 CCDC152Q4G0S7 254 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 TBC1D10BQ4KMP7 808 aaPredicted RBP14.37□□□□□ -0.11
TARDBP-221ENST00000619555 DLK2Q6UY11 383 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 KSR2Q6VAB6 950 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 CDC37L1Q7L3B6 337 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 USP48Q86UV5 1035 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 PI4KAP1Q8N8J0 262 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 CHMP4AQ9BY43 222 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 ZC3H12CQ9C0D7 883 aaKnown RBP14.37□□□□□ -0.11
TARDBP-221ENST00000619555 ZNF408Q9H9D4 720 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 PODXL2Q9NZ53 605 aa14.37□□□□□ -0.11
TARDBP-221ENST00000619555 SCN9AQ15858 1988 aa14.36□□□□□ -0.11
TARDBP-221ENST00000619555 AOC2O75106 756 aa14.36□□□□□ -0.11
TARDBP-221ENST00000619555 UFL1O94874 794 aa14.36□□□□□ -0.11
TARDBP-221ENST00000619555 IGKV5-2P06315 115 aa14.36□□□□□ -0.11
TARDBP-221ENST00000619555 RBM26Q5T8P6 1007 aaKnown RBP14.36□□□□□ -0.11
TARDBP-221ENST00000619555 G2E3Q7L622 706 aa14.36□□□□□ -0.11
TARDBP-221ENST00000619555 SAPCD2Q86UD0 394 aa14.36□□□□□ -0.11
TARDBP-221ENST00000619555 WWC1Q8IX03 1113 aa14.36□□□□□ -0.11
TARDBP-221ENST00000619555 ANKIB1Q9P2G1 1089 aa14.36□□□□□ -0.11
TARDBP-221ENST00000619555 GGA1Q9UJY5 639 aa14.36□□□□□ -0.11
TARDBP-221ENST00000619555 CCDC27Q2M243 656 aa14.35□□□□□ -0.11
TARDBP-221ENST00000619555 G3V3G9 751 aa14.34□□□□□ -0.11
TARDBP-221ENST00000619555 VIL1P09327 827 aaKnown RBP14.34□□□□□ -0.11
TARDBP-221ENST00000619555 RPS12P25398 132 aaKnown RBP14.34□□□□□ -0.11
TARDBP-221ENST00000619555 TWISTNBQ3B726 338 aaPredicted RBP14.34□□□□□ -0.11
TARDBP-221ENST00000619555 DCAF8Q5TAQ9 597 aa14.34□□□□□ -0.11
TARDBP-221ENST00000619555 ANKRD18AQ8IVF6 992 aa14.34□□□□□ -0.11
TARDBP-221ENST00000619555 STK31Q9BXU1 1019 aa14.34□□□□□ -0.11
TARDBP-221ENST00000619555 WTIPA6NIX2 430 aaPredicted RBP14.33□□□□□ -0.12
TARDBP-221ENST00000619555 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
TARDBP-221ENST00000619555 CTSWP56202 376 aa14.33□□□□□ -0.12
TARDBP-221ENST00000619555 CWF19L2Q2TBE0 894 aaKnown RBP14.33□□□□□ -0.12
TARDBP-221ENST00000619555 TTLL11Q8NHH1 800 aa14.33□□□□□ -0.12
TARDBP-221ENST00000619555 MRS2Q9HD23 443 aa14.33□□□□□ -0.12
TARDBP-221ENST00000619555 THSD7BQ9C0I4 1608 aa14.33□□□□□ -0.12
TARDBP-221ENST00000619555 NEURL1BA8MQ27 555 aa14.32□□□□□ -0.12
TARDBP-221ENST00000619555 MAP2K2P36507 400 aa14.32□□□□□ -0.12
TARDBP-221ENST00000619555 NEXNQ0ZGT2 675 aa14.32□□□□□ -0.12
TARDBP-221ENST00000619555 KRT26Q7Z3Y9 468 aa14.32□□□□□ -0.12
TARDBP-221ENST00000619555 BEGAINQ9BUH8 593 aa14.32□□□□□ -0.12
TARDBP-221ENST00000619555 GREM2Q9H772 168 aa14.32□□□□□ -0.12
TARDBP-221ENST00000619555 TSKSQ9UJT2 592 aa14.32□□□□□ -0.12
TARDBP-221ENST00000619555 SALL2Q9Y467 1007 aaPredicted RBP14.32□□□□□ -0.12
TARDBP-221ENST00000619555 ASTN2O75129 1339 aaPredicted RBP14.32□□□□□ -0.12
TARDBP-221ENST00000619555 XDHP47989 1333 aa14.32□□□□□ -0.12
TARDBP-221ENST00000619555 ADM5C9JUS6 153 aa14.31□□□□□ -0.12
TARDBP-221ENST00000619555 H7C1W4 665 aa14.31□□□□□ -0.12
TARDBP-221ENST00000619555 ATP2B4P23634 1241 aa14.31□□□□□ -0.12
TARDBP-221ENST00000619555 KIF4BQ2VIQ3 1234 aa14.31□□□□□ -0.12
TARDBP-221ENST00000619555 HHIPL1Q96JK4 782 aa14.31□□□□□ -0.12
TARDBP-221ENST00000619555 CDC5LQ99459 802 aaKnown RBP14.31□□□□□ -0.12
TARDBP-221ENST00000619555 IL16Q14005 1332 aa14.31□□□□□ -0.12
TARDBP-221ENST00000619555 HUNKP57058 714 aa14.3□□□□□ -0.12
TARDBP-221ENST00000619555 RSBN1LQ6PCB5 846 aaPredicted RBP14.3□□□□□ -0.12
TARDBP-221ENST00000619555 UBE3BQ7Z3V4 1068 aa14.3□□□□□ -0.12
TARDBP-221ENST00000619555 DCPSQ96C86 337 aaKnown RBP14.3□□□□□ -0.12
TARDBP-221ENST00000619555 ZIC5Q96T25 663 aa14.3□□□□□ -0.12
TARDBP-221ENST00000619555 MINPP1Q9UNW1 487 aa14.3□□□□□ -0.12
TARDBP-221ENST00000619555 MYH3P11055 1940 aa14.3□□□□□ -0.12
TARDBP-221ENST00000619555 FLIIQ13045 1269 aa14.29□□□□□ -0.12
TARDBP-221ENST00000619555 AGBL3Q8NEM8 1001 aa14.29□□□□□ -0.12
TARDBP-221ENST00000619555 BSDC1Q9NW68 430 aaPredicted RBP14.29□□□□□ -0.12
TARDBP-221ENST00000619555 FANCIQ9NVI1 1328 aa14.29□□□□□ -0.12
TARDBP-221ENST00000619555 SPEF2Q9C093 1822 aa14.29□□□□□ -0.12
TARDBP-221ENST00000619555 VAMP4O75379 141 aa14.28□□□□□ -0.12
TARDBP-221ENST00000619555 ZNF280AP59817 542 aaPredicted RBP14.28□□□□□ -0.12
TARDBP-221ENST00000619555 SCARF1Q14162 830 aa14.28□□□□□ -0.12
TARDBP-221ENST00000619555 GCKRQ14397 625 aa14.28□□□□□ -0.12
TARDBP-221ENST00000619555 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
TARDBP-221ENST00000619555 GMLQ99445 158 aa14.28□□□□□ -0.12
TARDBP-221ENST00000619555 GBA2Q9HCG7 927 aaPredicted RBP14.28□□□□□ -0.12
TARDBP-221ENST00000619555 GGA3Q9NZ52 723 aa14.28□□□□□ -0.12
TARDBP-221ENST00000619555 CASP8AP2Q9UKL3 1982 aa14.27□□□□□ -0.12
TARDBP-221ENST00000619555 PSME4Q14997 1843 aa14.27□□□□□ -0.12
TARDBP-221ENST00000619555 USP17L3A6NCW0 530 aa14.27□□□□□ -0.13
TARDBP-221ENST00000619555 USP17L4A6NCW7 530 aa14.27□□□□□ -0.13
TARDBP-221ENST00000619555 CCT4P50991 539 aaKnown RBP14.27□□□□□ -0.13
TARDBP-221ENST00000619555 CASP7P55210 303 aa14.27□□□□□ -0.13
TARDBP-221ENST00000619555 EXOSC9Q06265 439 aaKnown RBP14.27□□□□□ -0.13
TARDBP-221ENST00000619555 FKBP5Q13451 457 aaPredicted RBP14.27□□□□□ -0.13
TARDBP-221ENST00000619555 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.13
TARDBP-221ENST00000619555 PODNQ7Z5L7 613 aa14.27□□□□□ -0.13
TARDBP-221ENST00000619555 SULF1Q8IWU6 871 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms