RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 G3BP1Q13283 466 aaKnown RBP eCLIP12.95□□□□□ -0.34
NBPF3-213ENST00000619554 GPR162Q16538 588 aa12.95□□□□□ -0.34
NBPF3-213ENST00000619554 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
NBPF3-213ENST00000619554 SSH3Q8TE77 659 aa12.95□□□□□ -0.34
NBPF3-213ENST00000619554 ZNF594Q96JF6 807 aaPredicted RBP12.95□□□□□ -0.34
NBPF3-213ENST00000619554 TBC1D32Q96NH3 1257 aa12.95□□□□□ -0.34
NBPF3-213ENST00000619554 ATP6V0A2Q9Y487 856 aa12.95□□□□□ -0.34
NBPF3-213ENST00000619554 C21orf2O43822 256 aa12.94□□□□□ -0.34
NBPF3-213ENST00000619554 SURF6O75683 361 aaKnown RBP12.94□□□□□ -0.34
NBPF3-213ENST00000619554 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
NBPF3-213ENST00000619554 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
NBPF3-213ENST00000619554 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
NBPF3-213ENST00000619554 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
NBPF3-213ENST00000619554 KLHDC4Q8TBB5 520 aa12.94□□□□□ -0.34
NBPF3-213ENST00000619554 SIL1Q9H173 461 aa12.94□□□□□ -0.34
NBPF3-213ENST00000619554 ANTXR1Q9H6X2 564 aa12.94□□□□□ -0.34
NBPF3-213ENST00000619554 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
NBPF3-213ENST00000619554 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
NBPF3-213ENST00000619554 PTPN12Q05209 780 aaKnown RBP12.93□□□□□ -0.34
NBPF3-213ENST00000619554 POLA2Q14181 598 aa12.93□□□□□ -0.34
NBPF3-213ENST00000619554 RTKN2Q8IZC4 609 aa12.93□□□□□ -0.34
NBPF3-213ENST00000619554 ANKRD2Q9GZV1 360 aa12.93□□□□□ -0.34
NBPF3-213ENST00000619554 COPRSQ9NQ92 184 aa12.93□□□□□ -0.34
NBPF3-213ENST00000619554 PCDHB15Q9Y5E8 787 aa12.93□□□□□ -0.34
NBPF3-213ENST00000619554 LRP5O75197 1615 aa12.93□□□□□ -0.34
NBPF3-213ENST00000619554 EYA2O00167 538 aa12.92□□□□□ -0.34
NBPF3-213ENST00000619554 CIAO1O76071 339 aa12.92□□□□□ -0.34
NBPF3-213ENST00000619554 RFX5P48382 616 aaPredicted RBP12.92□□□□□ -0.34
NBPF3-213ENST00000619554 CCDC93Q567U6 631 aa12.92□□□□□ -0.34
NBPF3-213ENST00000619554 METTL24Q5JXM2 366 aa12.92□□□□□ -0.34
NBPF3-213ENST00000619554 L1TD1Q5T7N2 865 aaKnown RBP12.92□□□□□ -0.34
NBPF3-213ENST00000619554 PA2G4Q9UQ80 394 aaKnown RBP12.92□□□□□ -0.34
NBPF3-213ENST00000619554 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
NBPF3-213ENST00000619554 SEC24BO95487 1268 aa12.92□□□□□ -0.34
NBPF3-213ENST00000619554 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
NBPF3-213ENST00000619554 KCNJ4P48050 445 aa12.92□□□□□ -0.34
NBPF3-213ENST00000619554 DPP8Q6V1X1 898 aaPredicted RBP12.92□□□□□ -0.34
NBPF3-213ENST00000619554 CEP126Q9P2H0 1117 aa12.92□□□□□ -0.34
NBPF3-213ENST00000619554 MINPP1Q9UNW1 487 aa12.92□□□□□ -0.34
NBPF3-213ENST00000619554 NSFL1CQ9UNZ2 370 aaKnown RBP12.92□□□□□ -0.34
NBPF3-213ENST00000619554 GRIN3BO60391 1043 aa12.91□□□□□ -0.34
NBPF3-213ENST00000619554 ERC1Q8IUD2 1116 aa12.91□□□□□ -0.34
NBPF3-213ENST00000619554 SIRT2Q8IXJ6 389 aa12.91□□□□□ -0.34
NBPF3-213ENST00000619554 MPNDQ8N594 471 aa12.91□□□□□ -0.34
NBPF3-213ENST00000619554 C7orf43Q8WVR3 580 aa12.91□□□□□ -0.34
NBPF3-213ENST00000619554 CHRNDQ07001 517 aa12.9□□□□□ -0.34
NBPF3-213ENST00000619554 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
NBPF3-213ENST00000619554 PUS3Q9BZE2 481 aaKnown RBP12.9□□□□□ -0.34
NBPF3-213ENST00000619554 N4BP2Q86UW6 1770 aaPredicted RBP12.9□□□□□ -0.34
NBPF3-213ENST00000619554 TNRC6CQ9HCJ0 1690 aaKnown RBP12.9□□□□□ -0.34
NBPF3-213ENST00000619554 LRRC24Q50LG9 513 aa12.9□□□□□ -0.34
NBPF3-213ENST00000619554 ARHGAP27Q6ZUM4 889 aa12.9□□□□□ -0.34
NBPF3-213ENST00000619554 SUPT20HQ8NEM7 779 aa12.9□□□□□ -0.34
NBPF3-213ENST00000619554 RTN4Q9NQC3 1192 aaKnown RBP12.9□□□□□ -0.34
NBPF3-213ENST00000619554 GGA1Q9UJY5 639 aa12.9□□□□□ -0.34
NBPF3-213ENST00000619554 RIPOR2Q9Y4F9 1068 aa12.9□□□□□ -0.34
NBPF3-213ENST00000619554 XDHP47989 1333 aa12.89□□□□□ -0.35
NBPF3-213ENST00000619554 C6orf229H3BNL8 230 aa12.89□□□□□ -0.35
NBPF3-213ENST00000619554 RAB11FIP3O75154 756 aa12.89□□□□□ -0.35
NBPF3-213ENST00000619554 ATP2B4P23634 1241 aa12.89□□□□□ -0.35
NBPF3-213ENST00000619554 GPSM2P81274 684 aa12.89□□□□□ -0.35
NBPF3-213ENST00000619554 OLFM4Q6UX06 510 aa12.89□□□□□ -0.35
NBPF3-213ENST00000619554 EXOC6BQ9Y2D4 811 aa12.89□□□□□ -0.35
NBPF3-213ENST00000619554 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
NBPF3-213ENST00000619554 APBB1O00213 710 aa12.88□□□□□ -0.35
NBPF3-213ENST00000619554 UFL1O94874 794 aa12.88□□□□□ -0.35
NBPF3-213ENST00000619554 HELBQ8NG08 1087 aaPredicted RBP12.88□□□□□ -0.35
NBPF3-213ENST00000619554 EYA3Q99504 573 aa12.88□□□□□ -0.35
NBPF3-213ENST00000619554 TAOK3Q9H2K8 898 aa12.88□□□□□ -0.35
NBPF3-213ENST00000619554 PODXL2Q9NZ53 605 aa12.88□□□□□ -0.35
NBPF3-213ENST00000619554 AKAP2Q9Y2D5 859 aa12.88□□□□□ -0.35
NBPF3-213ENST00000619554 LEMD3Q9Y2U8 911 aa12.88□□□□□ -0.35
NBPF3-213ENST00000619554 ATG9AQ7Z3C6 839 aa12.88□□□□□ -0.35
NBPF3-213ENST00000619554 GCC1Q96CN9 775 aa12.88□□□□□ -0.35
NBPF3-213ENST00000619554 DCTPP1Q9H773 170 aa12.88□□□□□ -0.35
NBPF3-213ENST00000619554 ANKRD31Q8N7Z5 1873 aa12.87□□□□□ -0.35
NBPF3-213ENST00000619554 KIF13BQ9NQT8 1826 aa12.87□□□□□ -0.35
NBPF3-213ENST00000619554 G3V3G9 751 aa12.87□□□□□ -0.35
NBPF3-213ENST00000619554 TAF5LO75529 589 aa12.87□□□□□ -0.35
NBPF3-213ENST00000619554 PDE8BO95263 885 aa12.87□□□□□ -0.35
NBPF3-213ENST00000619554 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
NBPF3-213ENST00000619554 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
NBPF3-213ENST00000619554 PUM3Q15397 648 aaKnown RBP12.87□□□□□ -0.35
NBPF3-213ENST00000619554 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
NBPF3-213ENST00000619554 KIF1BPQ96EK5 621 aa12.87□□□□□ -0.35
NBPF3-213ENST00000619554 PSMD1Q99460 953 aa12.87□□□□□ -0.35
NBPF3-213ENST00000619554 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
NBPF3-213ENST00000619554 ZC3H12CQ9C0D7 883 aaKnown RBP12.87□□□□□ -0.35
NBPF3-213ENST00000619554 LAMB2P55268 1798 aa12.87□□□□□ -0.35
NBPF3-213ENST00000619554 UTRNP46939 3433 aa12.86□□□□□ -0.35
NBPF3-213ENST00000619554 TFCP2Q12800 502 aa12.86□□□□□ -0.35
NBPF3-213ENST00000619554 TBC1D16Q8TBP0 767 aa12.86□□□□□ -0.35
NBPF3-213ENST00000619554 ZNF804BA4D1E1 1349 aa12.86□□□□□ -0.35
NBPF3-213ENST00000619554 IFIT1P09914 478 aaKnown RBP12.85□□□□□ -0.35
NBPF3-213ENST00000619554 SLC5A1P13866 664 aa12.85□□□□□ -0.35
NBPF3-213ENST00000619554 UBE4AQ14139 1066 aa12.85□□□□□ -0.35
NBPF3-213ENST00000619554 WASHC4Q2M389 1173 aa12.85□□□□□ -0.35
NBPF3-213ENST00000619554 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
NBPF3-213ENST00000619554 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
NBPF3-213ENST00000619554 ATP2B3Q16720 1220 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms