RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 LUZP1Q86V48 1076 aa18.6■□□□□ 0.57
SEMA3B-214ENST00000619119 SMARCE1Q969G3 411 aa18.6■□□□□ 0.57
SEMA3B-214ENST00000619119 FHOD1Q9Y613 1164 aa18.6■□□□□ 0.57
SEMA3B-214ENST00000619119 PLA2G4AP47712 749 aa18.59■□□□□ 0.57
SEMA3B-214ENST00000619119 ZNF622Q969S3 477 aaKnown RBP eCLIP18.59■□□□□ 0.57
SEMA3B-214ENST00000619119 PA2G4Q9UQ80 394 aaKnown RBP18.59■□□□□ 0.57
SEMA3B-214ENST00000619119 RILPL2Q969X0 211 aa18.59■□□□□ 0.57
SEMA3B-214ENST00000619119 TRIM5Q9C035 493 aa18.59■□□□□ 0.57
SEMA3B-214ENST00000619119 PNMA6AP0CW24 399 aaPredicted RBP18.58■□□□□ 0.57
SEMA3B-214ENST00000619119 GUCY2CP25092 1073 aa18.58■□□□□ 0.57
SEMA3B-214ENST00000619119 ERCC6LQ2NKX8 1250 aa18.58■□□□□ 0.57
SEMA3B-214ENST00000619119 LINS1Q8NG48 757 aa18.58■□□□□ 0.57
SEMA3B-214ENST00000619119 WDR33Q9C0J8 1336 aaKnown RBP18.58■□□□□ 0.56
SEMA3B-214ENST00000619119 TCHHQ07283 1943 aa18.58■□□□□ 0.56
SEMA3B-214ENST00000619119 MAP4K4O95819 1239 aaPredicted RBP18.58■□□□□ 0.56
SEMA3B-214ENST00000619119 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
SEMA3B-214ENST00000619119 PTPN14Q15678 1187 aa18.58■□□□□ 0.56
SEMA3B-214ENST00000619119 SLFNL1Q499Z3 407 aa18.58■□□□□ 0.56
SEMA3B-214ENST00000619119 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.58■□□□□ 0.56
SEMA3B-214ENST00000619119 CACTINQ8WUQ7 758 aaKnown RBP18.58■□□□□ 0.56
SEMA3B-214ENST00000619119 TRMT1Q9NXH9 659 aaKnown RBP18.58■□□□□ 0.56
SEMA3B-214ENST00000619119 ATP5J2-PTCD1G3V325 749 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 GRM8O00222 908 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 SLU7O95391 586 aaKnown RBP18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 CLCN6P51797 869 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 UBE2HP62256 183 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 ZNF330Q9Y3S2 320 aaPredicted RBP18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 PATL2C9JE40 543 aaKnown RBP18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 ADAMTS2O95450 1211 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 NEXNQ0ZGT2 675 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 ANKRD13DQ6ZTN6 518 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 SUCLG2Q96I99 432 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 CHMP3Q9Y3E7 222 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 JRKLQ9Y4A0 524 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 KAT6BQ8WYB5 2073 aa18.57■□□□□ 0.56
SEMA3B-214ENST00000619119 ALDH1L1O75891 902 aa18.56■□□□□ 0.56
SEMA3B-214ENST00000619119 POLA2Q14181 598 aa18.56■□□□□ 0.56
SEMA3B-214ENST00000619119 CCDC192P0DO97 292 aa18.56■□□□□ 0.56
SEMA3B-214ENST00000619119 C5P01031 1676 aa18.56■□□□□ 0.56
SEMA3B-214ENST00000619119 GOLGA6L1Q8N7Z2 621 aa18.56■□□□□ 0.56
SEMA3B-214ENST00000619119 RRP15Q9Y3B9 282 aaKnown RBP18.56■□□□□ 0.56
SEMA3B-214ENST00000619119 ABCC6O95255 1503 aa18.56■□□□□ 0.56
SEMA3B-214ENST00000619119 TPM4P67936 248 aa18.55■□□□□ 0.56
SEMA3B-214ENST00000619119 BICC1Q9H694 974 aaKnown RBP18.55■□□□□ 0.56
SEMA3B-214ENST00000619119 ZCCHC17Q9NP64 241 aaKnown RBP18.55■□□□□ 0.56
SEMA3B-214ENST00000619119 A1BGP04217 495 aa18.55■□□□□ 0.56
SEMA3B-214ENST00000619119 CUL4AQ13619 759 aa18.55■□□□□ 0.56
SEMA3B-214ENST00000619119 UPF3BQ9BZI7 483 aaKnown RBP18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 A0A0G2JS52 829 aa18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 PIP4K2BP78356 416 aa18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 KLHDC4Q8TBB5 520 aa18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 FAM200AQ8TCP9 573 aa18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 SIL1Q9H173 461 aa18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 CWC15Q9P013 229 aaKnown RBP18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 E2F4Q16254 413 aa18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 SRLQ86TD4 932 aa18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 UNC5CLQ8IV45 518 aa18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 LRRN4CLQ8ND94 238 aa18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 BRMS1Q9HCU9 246 aa18.54■□□□□ 0.56
SEMA3B-214ENST00000619119 PKD1L3Q7Z443 1732 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 NEURL1BA8MQ27 555 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 ERC2O15083 957 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 ARID5BQ14865 1188 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 KAZALD1Q96I82 304 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 OSBPL3Q9H4L5 887 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 ATG3Q9NT62 314 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 SALL3Q9BXA9 1300 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 H2AFXP16104 143 aaPredicted RBP18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 GPS2Q13227 327 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 CCDC144BQ3MJ40 725 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 CCDC144CPQ8IYA2 1237 aa18.53■□□□□ 0.56
SEMA3B-214ENST00000619119 NBPF26B4DH59 902 aa18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 TTC31Q49AM3 519 aaPredicted RBP18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 NBPF14Q5TI25 921 aa18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 NBPF10Q6P3W6 841 aaKnown RBP18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 LRP10Q7Z4F1 713 aa18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 NBPF15Q8N660 670 aa18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 METTL22Q9BUU2 404 aaPredicted RBP18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 CLIP2Q9UDT6 1046 aa18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 ERVV-2B6SEH9 535 aa18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 CAMK4Q16566 473 aa18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 TMEM87AQ8NBN3 555 aa18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 BCCIPQ9P287 314 aaKnown RBP eCLIP18.52■□□□□ 0.56
SEMA3B-214ENST00000619119 A0A1B0GUL7 405 aa18.52■□□□□ 0.55
SEMA3B-214ENST00000619119 NUTM2BA6NNL0 878 aaPredicted RBP18.52■□□□□ 0.55
SEMA3B-214ENST00000619119 NUTM2EB1AL46 878 aaPredicted RBP18.52■□□□□ 0.55
SEMA3B-214ENST00000619119 DTNBO60941 627 aa18.52■□□□□ 0.55
SEMA3B-214ENST00000619119 ZNF75DP51815 510 aa18.52■□□□□ 0.55
SEMA3B-214ENST00000619119 NUTM2AQ8IVF1 878 aaPredicted RBP18.52■□□□□ 0.55
SEMA3B-214ENST00000619119 TMOD3Q9NYL9 352 aa18.52■□□□□ 0.55
SEMA3B-214ENST00000619119 CEP83Q9Y592 693 aa18.52■□□□□ 0.55
SEMA3B-214ENST00000619119 RAB11FIP3O75154 756 aa18.51■□□□□ 0.55
SEMA3B-214ENST00000619119 MCM2P49736 904 aa18.51■□□□□ 0.55
SEMA3B-214ENST00000619119 GCKRQ14397 625 aa18.51■□□□□ 0.55
SEMA3B-214ENST00000619119 ARHGAP29Q52LW3 1261 aa18.51■□□□□ 0.55
SEMA3B-214ENST00000619119 TTLL7Q6ZT98 887 aa18.51■□□□□ 0.55
SEMA3B-214ENST00000619119 PALD1Q9ULE6 856 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms