RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 GGA1Q9UJY5 639 aa31.43■■■□□ 2.62
PMS1-220ENST00000618056 MINPP1Q9UNW1 487 aa31.43■■■□□ 2.62
PMS1-220ENST00000618056 KIF16BQ96L93 1317 aa31.42■■■□□ 2.62
PMS1-220ENST00000618056 LMBR1LQ6UX01 489 aa31.42■■■□□ 2.62
PMS1-220ENST00000618056 API5Q9BZZ5 524 aaKnown RBP31.42■■■□□ 2.62
PMS1-220ENST00000618056 ANKRD18BA2A2Z9 1011 aa31.41■■■□□ 2.62
PMS1-220ENST00000618056 UFL1O94874 794 aa31.41■■■□□ 2.62
PMS1-220ENST00000618056 FSTL1Q12841 308 aa31.41■■■□□ 2.62
PMS1-220ENST00000618056 CXCL9Q07325 125 aa31.4■■■□□ 2.62
PMS1-220ENST00000618056 IFIT5Q13325 482 aaKnown RBP31.4■■■□□ 2.62
PMS1-220ENST00000618056 ARHGAP45Q92619 1136 aa31.4■■■□□ 2.62
PMS1-220ENST00000618056 KAZALD1Q96I82 304 aa31.4■■■□□ 2.62
PMS1-220ENST00000618056 SMC1BQ8NDV3 1235 aa31.4■■■□□ 2.62
PMS1-220ENST00000618056 SUCLG2Q96I99 432 aa31.4■■■□□ 2.62
PMS1-220ENST00000618056 MPHOSPH8Q99549 860 aa31.4■■■□□ 2.62
PMS1-220ENST00000618056 HACL1Q9UJ83 578 aa31.4■■■□□ 2.62
PMS1-220ENST00000618056 GJA3Q9Y6H8 435 aa31.4■■■□□ 2.62
PMS1-220ENST00000618056 A0A1B0GUL6 1792 aa31.39■■■□□ 2.62
PMS1-220ENST00000618056 ATP2B4P23634 1241 aa31.39■■■□□ 2.62
PMS1-220ENST00000618056 CCT4P50991 539 aaKnown RBP31.39■■■□□ 2.62
PMS1-220ENST00000618056 USP44Q9H0E7 712 aa31.39■■■□□ 2.62
PMS1-220ENST00000618056 TAF1DQ9H5J8 278 aaPredicted RBP31.39■■■□□ 2.62
PMS1-220ENST00000618056 SCN9AQ15858 1988 aa31.38■■■□□ 2.61
PMS1-220ENST00000618056 YDJCA8MPS7 323 aa31.38■■■□□ 2.61
PMS1-220ENST00000618056 RIMBP2O15034 1052 aa31.38■■■□□ 2.61
PMS1-220ENST00000618056 HSPA6P17066 643 aa31.38■■■□□ 2.61
PMS1-220ENST00000618056 ZC3H12CQ9C0D7 883 aaKnown RBP31.38■■■□□ 2.61
PMS1-220ENST00000618056 CHMP3Q9Y3E7 222 aa31.38■■■□□ 2.61
PMS1-220ENST00000618056 GPR101Q96P66 508 aaPredicted RBP31.37■■■□□ 2.61
PMS1-220ENST00000618056 CCDC57Q2TAC2 916 aa31.36■■■□□ 2.61
PMS1-220ENST00000618056 CIAPIN1Q6FI81 312 aa31.36■■■□□ 2.61
PMS1-220ENST00000618056 PSME4Q14997 1843 aa31.36■■■□□ 2.61
PMS1-220ENST00000618056 SCNN1DP51172 638 aa31.35■■■□□ 2.61
PMS1-220ENST00000618056 TNIP1Q15025 636 aa31.35■■■□□ 2.61
PMS1-220ENST00000618056 RABL6Q3YEC7 729 aaPredicted RBP31.35■■■□□ 2.61
PMS1-220ENST00000618056 DBNDD1Q9H9R9 158 aa31.35■■■□□ 2.61
PMS1-220ENST00000618056 ADAMTSL1Q8N6G6 1762 aa31.34■■■□□ 2.61
PMS1-220ENST00000618056 ANKRD2Q9GZV1 360 aa31.34■■■□□ 2.61
PMS1-220ENST00000618056 ECE2O60344 883 aa31.33■■■□□ 2.61
PMS1-220ENST00000618056 EPHX2P34913 555 aa31.33■■■□□ 2.61
PMS1-220ENST00000618056 IPO8O15397 1037 aaKnown RBP31.33■■■□□ 2.61
PMS1-220ENST00000618056 BCAR3O75815 825 aa31.33■■■□□ 2.61
PMS1-220ENST00000618056 RAD17O75943 681 aa31.33■■■□□ 2.61
PMS1-220ENST00000618056 LMOD1P29536 600 aaPredicted RBP31.33■■■□□ 2.61
PMS1-220ENST00000618056 BICC1Q9H694 974 aaKnown RBP31.33■■■□□ 2.61
PMS1-220ENST00000618056 LEMD3Q9Y2U8 911 aa31.33■■■□□ 2.61
PMS1-220ENST00000618056 MED23Q9ULK4 1368 aa31.32■■■□□ 2.61
PMS1-220ENST00000618056 DOK7Q18PE1 504 aa31.32■■■□□ 2.6
PMS1-220ENST00000618056 CHRNDQ07001 517 aa31.31■■■□□ 2.6
PMS1-220ENST00000618056 PNMA8AQ86V59 439 aaPredicted RBP31.31■■■□□ 2.6
PMS1-220ENST00000618056 ANKRD44Q8N8A2 993 aa31.31■■■□□ 2.6
PMS1-220ENST00000618056 POTEIP0CG38 1075 aa31.3■■■□□ 2.6
PMS1-220ENST00000618056 POTEJP0CG39 1038 aa31.3■■■□□ 2.6
PMS1-220ENST00000618056 LDHDQ86WU2 507 aa31.3■■■□□ 2.6
PMS1-220ENST00000618056 GPRC5DQ9NZD1 345 aa31.3■■■□□ 2.6
PMS1-220ENST00000618056 WTIPA6NIX2 430 aaPredicted RBP31.29■■■□□ 2.6
PMS1-220ENST00000618056 TAF7LQ5H9L4 462 aa31.29■■■□□ 2.6
PMS1-220ENST00000618056 INTS3Q68E01 1043 aaKnown RBP31.29■■■□□ 2.6
PMS1-220ENST00000618056 CHADLQ6NUI6 762 aa31.29■■■□□ 2.6
PMS1-220ENST00000618056 EPS15P42566 896 aa31.28■■■□□ 2.6
PMS1-220ENST00000618056 GMPSP49915 693 aaPredicted RBP31.28■■■□□ 2.6
PMS1-220ENST00000618056 LDHAL6AQ6ZMR3 332 aa31.28■■■□□ 2.6
PMS1-220ENST00000618056 ZNF594Q96JF6 807 aaPredicted RBP31.28■■■□□ 2.6
PMS1-220ENST00000618056 ZNF804BA4D1E1 1349 aa31.28■■■□□ 2.6
PMS1-220ENST00000618056 G3V3G9 751 aa31.27■■■□□ 2.6
PMS1-220ENST00000618056 TRIM27P14373 513 aa31.27■■■□□ 2.6
PMS1-220ENST00000618056 DCAF8Q5TAQ9 597 aa31.27■■■□□ 2.6
PMS1-220ENST00000618056 ATF7IPQ6VMQ6 1270 aa31.27■■■□□ 2.6
PMS1-220ENST00000618056 PSMD14O00487 310 aa31.27■■■□□ 2.6
PMS1-220ENST00000618056 APLP1P51693 650 aa31.26■■■□□ 2.59
PMS1-220ENST00000618056 EAPPQ56P03 285 aaPredicted RBP31.26■■■□□ 2.59
PMS1-220ENST00000618056 KCNQ5Q9NR82 932 aa31.26■■■□□ 2.59
PMS1-220ENST00000618056 UBTFL1P0CB47 393 aaPredicted RBP31.25■■■□□ 2.59
PMS1-220ENST00000618056 PODNQ7Z5L7 613 aa31.25■■■□□ 2.59
PMS1-220ENST00000618056 FRAT1Q92837 279 aaPredicted RBP31.25■■■□□ 2.59
PMS1-220ENST00000618056 DPF2Q92785 391 aa31.24■■■□□ 2.59
PMS1-220ENST00000618056 CNNM1Q9NRU3 951 aa31.24■■■□□ 2.59
PMS1-220ENST00000618056 HDAC5Q9UQL6 1122 aa31.24■■■□□ 2.59
PMS1-220ENST00000618056 USP50Q70EL3 339 aaPredicted RBP31.23■■■□□ 2.59
PMS1-220ENST00000618056 ADARB2Q9NS39 739 aaKnown RBP31.23■■■□□ 2.59
PMS1-220ENST00000618056 VIL1P09327 827 aaKnown RBP31.22■■■□□ 2.59
PMS1-220ENST00000618056 RPS12P25398 132 aaKnown RBP31.22■■■□□ 2.59
PMS1-220ENST00000618056 ZKSCAN2Q63HK3 967 aa31.22■■■□□ 2.59
PMS1-220ENST00000618056 ZNF646O15015 1829 aaPredicted RBP31.22■■■□□ 2.59
PMS1-220ENST00000618056 ZNF609O15014 1411 aa31.22■■■□□ 2.59
PMS1-220ENST00000618056 TAF5LO75529 589 aa31.21■■■□□ 2.59
PMS1-220ENST00000618056 KCNJ4P48050 445 aa31.21■■■□□ 2.59
PMS1-220ENST00000618056 TXNRD3Q86VQ6 643 aa31.21■■■□□ 2.59
PMS1-220ENST00000618056 HELBQ8NG08 1087 aaPredicted RBP31.21■■■□□ 2.59
PMS1-220ENST00000618056 COA1Q9GZY4 146 aa31.21■■■□□ 2.59
PMS1-220ENST00000618056 C15orf52Q6ZUT6 534 aaKnown RBP31.21■■■□□ 2.59
PMS1-220ENST00000618056 ZBTB12Q9Y330 459 aaPredicted RBP31.21■■■□□ 2.59
PMS1-220ENST00000618056 IRS2Q9Y4H2 1338 aa31.2■■■□□ 2.59
PMS1-220ENST00000618056 CNOT7Q9UIV1 285 aaKnown RBP31.2■■■□□ 2.58
PMS1-220ENST00000618056 CLEC11AQ9Y240 323 aa31.2■■■□□ 2.58
PMS1-220ENST00000618056 RIPOR2Q9Y4F9 1068 aa31.2■■■□□ 2.58
PMS1-220ENST00000618056 KLRK1P26718 216 aa31.19■■■□□ 2.58
PMS1-220ENST00000618056 MEIS3Q99687 375 aa31.19■■■□□ 2.58
PMS1-220ENST00000618056 PUS3Q9BZE2 481 aaKnown RBP31.19■■■□□ 2.58
PMS1-220ENST00000618056 TNNQ9UQP3 1299 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms