RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 ZBTB12Q9Y330 459 aaPredicted RBP28.47■■■□□ 2.15
NEDD4L-237ENST00000617539 RTL9Q8NET4 1388 aa28.47■■■□□ 2.15
NEDD4L-237ENST00000617539 H7C1W4 665 aa28.46■■■□□ 2.15
NEDD4L-237ENST00000617539 TRAF5O00463 557 aa28.46■■■□□ 2.15
NEDD4L-237ENST00000617539 PSMD14O00487 310 aa28.46■■■□□ 2.15
NEDD4L-237ENST00000617539 ECE2O60344 883 aa28.46■■■□□ 2.15
NEDD4L-237ENST00000617539 HIRAP54198 1017 aaPredicted RBP28.46■■■□□ 2.15
NEDD4L-237ENST00000617539 DOK7Q18PE1 504 aa28.46■■■□□ 2.15
NEDD4L-237ENST00000617539 EYA3Q99504 573 aa28.46■■■□□ 2.15
NEDD4L-237ENST00000617539 BCL2L13Q9BXK5 485 aa28.46■■■□□ 2.15
NEDD4L-237ENST00000617539 PSME4Q14997 1843 aa28.46■■■□□ 2.15
NEDD4L-237ENST00000617539 UFL1O94874 794 aa28.45■■■□□ 2.14
NEDD4L-237ENST00000617539 FKBP5Q13451 457 aaPredicted RBP28.45■■■□□ 2.14
NEDD4L-237ENST00000617539 COL13A1Q5TAT6 717 aaPredicted RBP28.45■■■□□ 2.14
NEDD4L-237ENST00000617539 UBE3BQ7Z3V4 1068 aa28.45■■■□□ 2.14
NEDD4L-237ENST00000617539 TRPM4Q8TD43 1214 aa28.45■■■□□ 2.14
NEDD4L-237ENST00000617539 GREM2Q9H772 168 aa28.45■■■□□ 2.14
NEDD4L-237ENST00000617539 VEGFBP49765 207 aa28.44■■■□□ 2.14
NEDD4L-237ENST00000617539 GCKRQ14397 625 aa28.44■■■□□ 2.14
NEDD4L-237ENST00000617539 ANKRD18AQ8IVF6 992 aa28.44■■■□□ 2.14
NEDD4L-237ENST00000617539 ANKIB1Q9P2G1 1089 aa28.44■■■□□ 2.14
NEDD4L-237ENST00000617539 CNOT7Q9UIV1 285 aaKnown RBP28.44■■■□□ 2.14
NEDD4L-237ENST00000617539 RASSF10A6NK89 507 aa28.43■■■□□ 2.14
NEDD4L-237ENST00000617539 CASP7P55210 303 aa28.43■■■□□ 2.14
NEDD4L-237ENST00000617539 DNAAF4Q8WXU2 420 aa28.43■■■□□ 2.14
NEDD4L-237ENST00000617539 PGAP2Q9UHJ9 254 aa28.43■■■□□ 2.14
NEDD4L-237ENST00000617539 GGA1Q9UJY5 639 aa28.43■■■□□ 2.14
NEDD4L-237ENST00000617539 CST9Q5W186 159 aa28.42■■■□□ 2.14
NEDD4L-237ENST00000617539 MICALL2Q8IY33 904 aa28.42■■■□□ 2.14
NEDD4L-237ENST00000617539 ZNF521Q96K83 1311 aa28.42■■■□□ 2.14
NEDD4L-237ENST00000617539 WTIPA6NIX2 430 aaPredicted RBP28.41■■■□□ 2.14
NEDD4L-237ENST00000617539 DPF2Q92785 391 aa28.41■■■□□ 2.14
NEDD4L-237ENST00000617539 ZC3H12CQ9C0D7 883 aaKnown RBP28.41■■■□□ 2.14
NEDD4L-237ENST00000617539 LINS1Q8NG48 757 aa28.4■■■□□ 2.14
NEDD4L-237ENST00000617539 CDC5LQ99459 802 aaKnown RBP28.4■■■□□ 2.14
NEDD4L-237ENST00000617539 XDHP47989 1333 aa28.4■■■□□ 2.14
NEDD4L-237ENST00000617539 ZNF646O15015 1829 aaPredicted RBP28.39■■■□□ 2.14
NEDD4L-237ENST00000617539 EGFRP00533 1210 aa28.39■■■□□ 2.14
NEDD4L-237ENST00000617539 PLA2G12BQ9BX93 195 aa28.39■■■□□ 2.14
NEDD4L-237ENST00000617539 GLIS2Q9BZE0 524 aaPredicted RBP28.39■■■□□ 2.14
NEDD4L-237ENST00000617539 MYH16Q9H6N6 1097 aa28.39■■■□□ 2.14
NEDD4L-237ENST00000617539 DEFB115Q30KQ5 88 aa28.38■■■□□ 2.13
NEDD4L-237ENST00000617539 ZC3H15Q8WU90 426 aaKnown RBP28.38■■■□□ 2.13
NEDD4L-237ENST00000617539 BSDC1Q9NW68 430 aaPredicted RBP28.38■■■□□ 2.13
NEDD4L-237ENST00000617539 ABT1Q9ULW3 272 aaKnown RBP28.38■■■□□ 2.13
NEDD4L-237ENST00000617539 THSD7BQ9C0I4 1608 aa28.38■■■□□ 2.13
NEDD4L-237ENST00000617539 F6X3S4 739 aa28.37■■■□□ 2.13
NEDD4L-237ENST00000617539 SAMD7Q7Z3H4 446 aa28.37■■■□□ 2.13
NEDD4L-237ENST00000617539 MINPP1Q9UNW1 487 aa28.37■■■□□ 2.13
NEDD4L-237ENST00000617539 H7C1D1 291 aa28.36■■■□□ 2.13
NEDD4L-237ENST00000617539 VIL1P09327 827 aaKnown RBP28.36■■■□□ 2.13
NEDD4L-237ENST00000617539 RPS12P25398 132 aaKnown RBP28.36■■■□□ 2.13
NEDD4L-237ENST00000617539 POLR2AP24928 1970 aaKnown RBP28.35■■■□□ 2.13
NEDD4L-237ENST00000617539 ATP2B4P23634 1241 aa28.35■■■□□ 2.13
NEDD4L-237ENST00000617539 FAM161AQ3B820 660 aa28.35■■■□□ 2.13
NEDD4L-237ENST00000617539 ZNF609O15014 1411 aa28.35■■■□□ 2.13
NEDD4L-237ENST00000617539 CSF1RP07333 972 aa28.34■■■□□ 2.13
NEDD4L-237ENST00000617539 TBC1D10BQ4KMP7 808 aaPredicted RBP28.34■■■□□ 2.13
NEDD4L-237ENST00000617539 BEND3Q5T5X7 828 aa28.34■■■□□ 2.13
NEDD4L-237ENST00000617539 A0A1B0GUL6 1792 aa28.34■■■□□ 2.13
NEDD4L-237ENST00000617539 WDR33Q9C0J8 1336 aaKnown RBP28.33■■■□□ 2.13
NEDD4L-237ENST00000617539 FOXN1O15353 648 aa28.32■■■□□ 2.12
NEDD4L-237ENST00000617539 ITGA6P23229 1130 aa28.32■■■□□ 2.12
NEDD4L-237ENST00000617539 TLL2Q9Y6L7 1015 aa28.32■■■□□ 2.12
NEDD4L-237ENST00000617539 MED23Q9ULK4 1368 aa28.32■■■□□ 2.12
NEDD4L-237ENST00000617539 G3V3G9 751 aa28.31■■■□□ 2.12
NEDD4L-237ENST00000617539 DCAF8Q5TAQ9 597 aa28.31■■■□□ 2.12
NEDD4L-237ENST00000617539 DLK2Q6UY11 383 aa28.31■■■□□ 2.12
NEDD4L-237ENST00000617539 CELF2O95319 508 aaKnown RBP28.3■■■□□ 2.12
NEDD4L-237ENST00000617539 CCT4P50991 539 aaKnown RBP28.3■■■□□ 2.12
NEDD4L-237ENST00000617539 CDC37L1Q7L3B6 337 aa28.3■■■□□ 2.12
NEDD4L-237ENST00000617539 FOXO4P98177 505 aa28.29■■■□□ 2.12
NEDD4L-237ENST00000617539 WBP1LQ9NX94 342 aa28.29■■■□□ 2.12
NEDD4L-237ENST00000617539 IGHMBP2P38935 993 aaKnown RBP28.28■■■□□ 2.12
NEDD4L-237ENST00000617539 RBM26Q5T8P6 1007 aaKnown RBP28.28■■■□□ 2.12
NEDD4L-237ENST00000617539 CYP4F22Q6NT55 531 aa28.28■■■□□ 2.12
NEDD4L-237ENST00000617539 RSBN1LQ6PCB5 846 aaPredicted RBP28.28■■■□□ 2.12
NEDD4L-237ENST00000617539 CAPNS2Q96L46 248 aa28.28■■■□□ 2.12
NEDD4L-237ENST00000617539 GMLQ99445 158 aa28.28■■■□□ 2.12
NEDD4L-237ENST00000617539 KIF4BQ2VIQ3 1234 aa28.27■■■□□ 2.12
NEDD4L-237ENST00000617539 PODNQ7Z5L7 613 aa28.27■■■□□ 2.12
NEDD4L-237ENST00000617539 SAPCD2Q86UD0 394 aa28.27■■■□□ 2.12
NEDD4L-237ENST00000617539 USP48Q86UV5 1035 aa28.27■■■□□ 2.12
NEDD4L-237ENST00000617539 TXNRD3Q86VQ6 643 aa28.27■■■□□ 2.12
NEDD4L-237ENST00000617539 ASTN2O75129 1339 aaPredicted RBP28.26■■■□□ 2.11
NEDD4L-237ENST00000617539 ZNF280AP59817 542 aaPredicted RBP28.26■■■□□ 2.11
NEDD4L-237ENST00000617539 EPHA10Q5JZY3 1008 aa28.26■■■□□ 2.11
NEDD4L-237ENST00000617539 AGBL3Q8NEM8 1001 aa28.26■■■□□ 2.11
NEDD4L-237ENST00000617539 ZNF408Q9H9D4 720 aa28.26■■■□□ 2.11
NEDD4L-237ENST00000617539 KLRK1P26718 216 aa28.25■■■□□ 2.11
NEDD4L-237ENST00000617539 USP17L3A6NCW0 530 aa28.24■■■□□ 2.11
NEDD4L-237ENST00000617539 USP17L4A6NCW7 530 aa28.24■■■□□ 2.11
NEDD4L-237ENST00000617539 USP17L1Q7RTZ2 530 aa28.24■■■□□ 2.11
NEDD4L-237ENST00000617539 LEMD3Q9Y2U8 911 aa28.24■■■□□ 2.11
NEDD4L-237ENST00000617539 ZNF804BA4D1E1 1349 aa28.23■■■□□ 2.11
NEDD4L-237ENST00000617539 ADM5C9JUS6 153 aa28.23■■■□□ 2.11
NEDD4L-237ENST00000617539 GRM8O00222 908 aa28.23■■■□□ 2.11
NEDD4L-237ENST00000617539 PAXIP1Q6ZW49 1069 aaPredicted RBP28.23■■■□□ 2.11
NEDD4L-237ENST00000617539 KRT26Q7Z3Y9 468 aa28.23■■■□□ 2.11
NEDD4L-237ENST00000617539 TNS4Q8IZW8 715 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms