RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 DISP1Q96F81 1524 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 IDEP14735 1019 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 SYCP1Q15431 976 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 TAF4BQ92750 862 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 PLCD4Q9BRC7 762 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 PAG1Q9NWQ8 432 aa17.76■□□□□ 0.43
PTPRT-210ENST00000617474 TIMM10P62072 90 aa17.75■□□□□ 0.43
PTPRT-210ENST00000617474 LZTFL1Q9NQ48 299 aa17.75■□□□□ 0.43
PTPRT-210ENST00000617474 MFSD6Q6ZSS7 791 aa17.75■□□□□ 0.43
PTPRT-210ENST00000617474 UTP14AQ9BVJ6 771 aaKnown RBP17.75■□□□□ 0.43
PTPRT-210ENST00000617474 RAD50Q92878 1312 aa17.75■□□□□ 0.43
PTPRT-210ENST00000617474 MTIF2P46199 727 aaKnown RBP17.75■□□□□ 0.43
PTPRT-210ENST00000617474 MAP9Q49MG5 647 aa17.75■□□□□ 0.43
PTPRT-210ENST00000617474 DHX32Q7L7V1 743 aaKnown RBP17.75■□□□□ 0.43
PTPRT-210ENST00000617474 NFATC2IPQ8NCF5 419 aa17.75■□□□□ 0.43
PTPRT-210ENST00000617474 CCDC194A0A1B0GVG4 234 aa17.75■□□□□ 0.43
PTPRT-210ENST00000617474 JAK2O60674 1132 aa17.75■□□□□ 0.43
PTPRT-210ENST00000617474 ERLIN2O94905 339 aa17.75■□□□□ 0.43
PTPRT-210ENST00000617474 CFAP65Q6ZU64 1925 aaKnown RBP17.74■□□□□ 0.43
PTPRT-210ENST00000617474 USP19O94966 1318 aa17.74■□□□□ 0.43
PTPRT-210ENST00000617474 SLC9C2Q5TAH2 1124 aa17.74■□□□□ 0.43
PTPRT-210ENST00000617474 EDC3Q96F86 508 aaKnown RBP17.74■□□□□ 0.43
PTPRT-210ENST00000617474 JADE2Q9NQC1 790 aa17.74■□□□□ 0.43
PTPRT-210ENST00000617474 FLT4P35916 1363 aa17.74■□□□□ 0.43
PTPRT-210ENST00000617474 SLC27A2O14975 620 aa17.74■□□□□ 0.43
PTPRT-210ENST00000617474 FKBP15Q5T1M5 1219 aa17.74■□□□□ 0.43
PTPRT-210ENST00000617474 GOLGA6L9A6NEM1 432 aa17.74■□□□□ 0.43
PTPRT-210ENST00000617474 ABCC1P33527 1531 aa17.74■□□□□ 0.43
PTPRT-210ENST00000617474 LRMPQ12912 555 aa17.73■□□□□ 0.43
PTPRT-210ENST00000617474 KRT28Q7Z3Y7 464 aa17.73■□□□□ 0.43
PTPRT-210ENST00000617474 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
PTPRT-210ENST00000617474 PUF60Q9UHX1 559 aaKnown RBP17.73■□□□□ 0.43
PTPRT-210ENST00000617474 ABCC10Q5T3U5 1492 aa17.73■□□□□ 0.43
PTPRT-210ENST00000617474 CATIPQ7Z7H3 387 aa17.73■□□□□ 0.43
PTPRT-210ENST00000617474 ABCC4O15439 1325 aa17.73■□□□□ 0.43
PTPRT-210ENST00000617474 SHTN1A0MZ66 631 aa17.73■□□□□ 0.43
PTPRT-210ENST00000617474 HSPA4P34932 840 aa17.73■□□□□ 0.43
PTPRT-210ENST00000617474 UBA7P41226 1012 aa17.73■□□□□ 0.43
PTPRT-210ENST00000617474 PAFAH1B1P43034 410 aa17.73■□□□□ 0.43
PTPRT-210ENST00000617474 LEO1Q8WVC0 666 aaPredicted RBP17.73■□□□□ 0.43
PTPRT-210ENST00000617474 SLC5A1P13866 664 aa17.72■□□□□ 0.43
PTPRT-210ENST00000617474 DHX58Q96C10 678 aa17.72■□□□□ 0.43
PTPRT-210ENST00000617474 FAM107BQ9H098 131 aa17.72■□□□□ 0.43
PTPRT-210ENST00000617474 ZFYVE9O95405 1425 aa17.72■□□□□ 0.43
PTPRT-210ENST00000617474 RNF41Q9H4P4 317 aaPredicted RBP17.72■□□□□ 0.43
PTPRT-210ENST00000617474 NUTM2BA6NNL0 878 aaPredicted RBP17.72■□□□□ 0.43
PTPRT-210ENST00000617474 NUTM2EB1AL46 878 aaPredicted RBP17.72■□□□□ 0.43
PTPRT-210ENST00000617474 RPS6KB1P23443 525 aa17.72■□□□□ 0.43
PTPRT-210ENST00000617474 ATP2B3Q16720 1220 aa17.72■□□□□ 0.43
PTPRT-210ENST00000617474 AKAP4Q5JQC9 854 aa17.72■□□□□ 0.43
PTPRT-210ENST00000617474 CTR9Q6PD62 1173 aa17.72■□□□□ 0.43
PTPRT-210ENST00000617474 NUTM2AQ8IVF1 878 aaPredicted RBP17.72■□□□□ 0.43
PTPRT-210ENST00000617474 DBNDD2Q9BQY9 259 aa17.72■□□□□ 0.43
PTPRT-210ENST00000617474 BCL2L12Q9HB09 334 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 LGR6Q9HBX8 967 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 TTC21AQ8NDW8 1320 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 VAT1LQ9HCJ6 419 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 BCCIPQ9P287 314 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPRT-210ENST00000617474 YTHDC2Q9H6S0 1430 aaKnown RBP17.71■□□□□ 0.43
PTPRT-210ENST00000617474 NEFHP12036 1026 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 HLTFQ14527 1009 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPRT-210ENST00000617474 WTAPQ15007 396 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 CAVIN4Q5BKX8 364 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 RRAGBQ5VZM2 374 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 UBA5Q9GZZ9 404 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 ZNF75DP51815 510 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 ELF2Q15723 593 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 HELBQ8NG08 1087 aaPredicted RBP17.71■□□□□ 0.43
PTPRT-210ENST00000617474 GTPBP4Q9BZE4 634 aaKnown RBP17.71■□□□□ 0.43
PTPRT-210ENST00000617474 CCDC113Q9H0I3 377 aa17.71■□□□□ 0.43
PTPRT-210ENST00000617474 ME3Q16798 604 aa17.7■□□□□ 0.42
PTPRT-210ENST00000617474 FAM160A1Q05DH4 1040 aa17.7■□□□□ 0.42
PTPRT-210ENST00000617474 TXLNBQ8N3L3 684 aa17.7■□□□□ 0.42
PTPRT-210ENST00000617474 TRIM47Q96LD4 638 aa17.7■□□□□ 0.42
PTPRT-210ENST00000617474 MAP3K5Q99683 1374 aa17.7■□□□□ 0.42
PTPRT-210ENST00000617474 MYO1BO43795 1136 aa17.7■□□□□ 0.42
PTPRT-210ENST00000617474 USO1O60763 962 aaKnown RBP17.7■□□□□ 0.42
PTPRT-210ENST00000617474 UNC5CLQ8IV45 518 aa17.7■□□□□ 0.42
PTPRT-210ENST00000617474 ZSCAN29Q8IWY8 852 aaPredicted RBP17.7■□□□□ 0.42
PTPRT-210ENST00000617474 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTPRT-210ENST00000617474 OGFRQ9NZT2 677 aa17.7■□□□□ 0.42
PTPRT-210ENST00000617474 KDM5CP41229 1560 aa17.69■□□□□ 0.42
PTPRT-210ENST00000617474 RHOXF2BP0C7M4 288 aa17.69■□□□□ 0.42
PTPRT-210ENST00000617474 TRIM21P19474 475 aaKnown RBP17.69■□□□□ 0.42
PTPRT-210ENST00000617474 IL15P40933 162 aaPredicted RBP17.69■□□□□ 0.42
PTPRT-210ENST00000617474 RNF187Q5TA31 235 aaPredicted RBP17.69■□□□□ 0.42
PTPRT-210ENST00000617474 SMAP1Q8IYB5 467 aaPredicted RBP17.69■□□□□ 0.42
PTPRT-210ENST00000617474 RHOXF2Q9BQY4 288 aa17.69■□□□□ 0.42
PTPRT-210ENST00000617474 RSPH14Q9UHP6 348 aa17.69■□□□□ 0.42
PTPRT-210ENST00000617474 USP44Q9H0E7 712 aa17.69■□□□□ 0.42
PTPRT-210ENST00000617474 CLSTN2Q9H4D0 955 aa17.69■□□□□ 0.42
PTPRT-210ENST00000617474 ZNF500O60304 480 aaPredicted RBP17.68■□□□□ 0.42
PTPRT-210ENST00000617474 PTH1RQ03431 593 aa17.68■□□□□ 0.42
PTPRT-210ENST00000617474 RTN1Q16799 776 aa17.68■□□□□ 0.42
PTPRT-210ENST00000617474 CTAGE15A4D2H0 777 aa17.68■□□□□ 0.42
PTPRT-210ENST00000617474 AKR1B10O60218 316 aa17.68■□□□□ 0.42
PTPRT-210ENST00000617474 CTAGE8P0CG41 777 aa17.68■□□□□ 0.42
PTPRT-210ENST00000617474 USP8P40818 1118 aa17.68■□□□□ 0.42
PTPRT-210ENST00000617474 CCDC178Q5BJE1 867 aa17.68■□□□□ 0.42
PTPRT-210ENST00000617474 CTAGE6Q86UF2 777 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms