RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 IGHMBP2P38935 993 aaKnown RBP20.46■□□□□ 0.87
SPTSSB-204ENST00000617024 TAF7LQ5H9L4 462 aa20.46■□□□□ 0.87
SPTSSB-204ENST00000617024 SP8Q8IXZ3 490 aa20.46■□□□□ 0.87
SPTSSB-204ENST00000617024 SOGA3Q5TF21 947 aa20.45■□□□□ 0.86
SPTSSB-204ENST00000617024 C7orf43Q8WVR3 580 aa20.45■□□□□ 0.86
SPTSSB-204ENST00000617024 CRBNQ96SW2 442 aa20.45■□□□□ 0.86
SPTSSB-204ENST00000617024 MPHOSPH8Q99549 860 aa20.45■□□□□ 0.86
SPTSSB-204ENST00000617024 C1orf115Q9H7X2 142 aa20.45■□□□□ 0.86
SPTSSB-204ENST00000617024 ATP6V0A2Q9Y487 856 aa20.45■□□□□ 0.86
SPTSSB-204ENST00000617024 SLX4Q8IY92 1834 aa20.45■□□□□ 0.86
SPTSSB-204ENST00000617024 ZC3H4Q9UPT8 1303 aaKnown RBP20.45■□□□□ 0.86
SPTSSB-204ENST00000617024 TAF1P21675 1872 aa20.44■□□□□ 0.86
SPTSSB-204ENST00000617024 CC2D2BQ6DHV5 1058 aa20.44■□□□□ 0.86
SPTSSB-204ENST00000617024 BSDC1Q9NW68 430 aaPredicted RBP20.44■□□□□ 0.86
SPTSSB-204ENST00000617024 GLTPD2A6NH11 291 aa20.43■□□□□ 0.86
SPTSSB-204ENST00000617024 ATP8B2P98198 1209 aa20.43■□□□□ 0.86
SPTSSB-204ENST00000617024 MTX1Q13505 466 aa20.43■□□□□ 0.86
SPTSSB-204ENST00000617024 ZNF594Q96JF6 807 aaPredicted RBP20.43■□□□□ 0.86
SPTSSB-204ENST00000617024 CACNA1SQ13698 1873 aa20.42■□□□□ 0.86
SPTSSB-204ENST00000617024 POTECB2RU33 542 aa20.42■□□□□ 0.86
SPTSSB-204ENST00000617024 SRGAP3O43295 1099 aa20.42■□□□□ 0.86
SPTSSB-204ENST00000617024 LMNB1P20700 586 aa20.42■□□□□ 0.86
SPTSSB-204ENST00000617024 GRIPAP1Q4V328 841 aa20.42■□□□□ 0.86
SPTSSB-204ENST00000617024 CCDC93Q567U6 631 aa20.42■□□□□ 0.86
SPTSSB-204ENST00000617024 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
SPTSSB-204ENST00000617024 RTKN2Q8IZC4 609 aa20.42■□□□□ 0.86
SPTSSB-204ENST00000617024 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
SPTSSB-204ENST00000617024 VEGFAP15692 232 aaPredicted RBP20.41■□□□□ 0.86
SPTSSB-204ENST00000617024 OLFM4Q6UX06 510 aa20.41■□□□□ 0.86
SPTSSB-204ENST00000617024 NFKBIEO00221 500 aa20.4■□□□□ 0.86
SPTSSB-204ENST00000617024 RFX5P48382 616 aaPredicted RBP20.4■□□□□ 0.86
SPTSSB-204ENST00000617024 RPAP2Q8IXW5 612 aaPredicted RBP20.4■□□□□ 0.86
SPTSSB-204ENST00000617024 CNNM1Q9NRU3 951 aa20.4■□□□□ 0.86
SPTSSB-204ENST00000617024 PNMA6EA0A0J9YXQ4 647 aa20.39■□□□□ 0.85
SPTSSB-204ENST00000617024 PTPN12Q05209 780 aaKnown RBP20.39■□□□□ 0.85
SPTSSB-204ENST00000617024 CEP85Q6P2H3 762 aa20.39■□□□□ 0.85
SPTSSB-204ENST00000617024 MPNDQ8N594 471 aa20.39■□□□□ 0.85
SPTSSB-204ENST00000617024 MINPP1Q9UNW1 487 aa20.39■□□□□ 0.85
SPTSSB-204ENST00000617024 IRX6P78412 446 aaPredicted RBP20.38■□□□□ 0.85
SPTSSB-204ENST00000617024 AAMPQ13685 434 aa20.38■□□□□ 0.85
SPTSSB-204ENST00000617024 EXOC6Q8TAG9 804 aa20.38■□□□□ 0.85
SPTSSB-204ENST00000617024 KLHDC4Q8TBB5 520 aa20.38■□□□□ 0.85
SPTSSB-204ENST00000617024 ANKIB1Q9P2G1 1089 aa20.38■□□□□ 0.85
SPTSSB-204ENST00000617024 NSFL1CQ9UNZ2 370 aaKnown RBP20.38■□□□□ 0.85
SPTSSB-204ENST00000617024 FER1L6Q2WGJ9 1857 aa20.38■□□□□ 0.85
SPTSSB-204ENST00000617024 POLA2Q14181 598 aa20.37■□□□□ 0.85
SPTSSB-204ENST00000617024 DPP8Q6V1X1 898 aaPredicted RBP20.37■□□□□ 0.85
SPTSSB-204ENST00000617024 SSH3Q8TE77 659 aa20.37■□□□□ 0.85
SPTSSB-204ENST00000617024 PUS3Q9BZE2 481 aaKnown RBP20.37■□□□□ 0.85
SPTSSB-204ENST00000617024 ANKRD2Q9GZV1 360 aa20.37■□□□□ 0.85
SPTSSB-204ENST00000617024 COL4A1P02462 1669 aa20.36■□□□□ 0.85
SPTSSB-204ENST00000617024 GPSM2P81274 684 aa20.36■□□□□ 0.85
SPTSSB-204ENST00000617024 SLC51AQ86UW1 340 aa20.36■□□□□ 0.85
SPTSSB-204ENST00000617024 COPRSQ9NQ92 184 aa20.36■□□□□ 0.85
SPTSSB-204ENST00000617024 FBXO3Q9UK99 471 aa20.36■□□□□ 0.85
SPTSSB-204ENST00000617024 PA2G4Q9UQ80 394 aaKnown RBP20.36■□□□□ 0.85
SPTSSB-204ENST00000617024 RIPOR2Q9Y4F9 1068 aa20.36■□□□□ 0.85
SPTSSB-204ENST00000617024 EYA2O00167 538 aa20.35■□□□□ 0.85
SPTSSB-204ENST00000617024 HMMRO75330 724 aa20.35■□□□□ 0.85
SPTSSB-204ENST00000617024 FKBP4Q02790 459 aaKnown RBP eCLIP20.35■□□□□ 0.85
SPTSSB-204ENST00000617024 CHRNDQ07001 517 aa20.35■□□□□ 0.85
SPTSSB-204ENST00000617024 LRRC24Q50LG9 513 aa20.35■□□□□ 0.85
SPTSSB-204ENST00000617024 SUPT20HQ8NEM7 779 aa20.35■□□□□ 0.85
SPTSSB-204ENST00000617024 SIL1Q9H173 461 aa20.35■□□□□ 0.85
SPTSSB-204ENST00000617024 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
SPTSSB-204ENST00000617024 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
SPTSSB-204ENST00000617024 PSMD1Q99460 953 aa20.34■□□□□ 0.85
SPTSSB-204ENST00000617024 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
SPTSSB-204ENST00000617024 XDHP47989 1333 aa20.33■□□□□ 0.85
SPTSSB-204ENST00000617024 MROH5Q6ZUA9 1318 aa20.33■□□□□ 0.85
SPTSSB-204ENST00000617024 C6orf229H3BNL8 230 aa20.33■□□□□ 0.85
SPTSSB-204ENST00000617024 CIAO1O76071 339 aa20.33■□□□□ 0.85
SPTSSB-204ENST00000617024 ATP2B4P23634 1241 aa20.33■□□□□ 0.85
SPTSSB-204ENST00000617024 G3BP1Q13283 466 aaKnown RBP eCLIP20.33■□□□□ 0.85
SPTSSB-204ENST00000617024 HELBQ8NG08 1087 aaPredicted RBP20.33■□□□□ 0.85
SPTSSB-204ENST00000617024 RTFDC1Q9BY42 306 aaPredicted RBP20.33■□□□□ 0.85
SPTSSB-204ENST00000617024 GGA1Q9UJY5 639 aa20.33■□□□□ 0.85
SPTSSB-204ENST00000617024 SPEF2Q9C093 1822 aa20.32■□□□□ 0.84
SPTSSB-204ENST00000617024 LTBP3Q9NS15 1303 aa20.32■□□□□ 0.84
SPTSSB-204ENST00000617024 SURF6O75683 361 aaKnown RBP20.32■□□□□ 0.84
SPTSSB-204ENST00000617024 IL15P40933 162 aaPredicted RBP20.32■□□□□ 0.84
SPTSSB-204ENST00000617024 METTL24Q5JXM2 366 aa20.32■□□□□ 0.84
SPTSSB-204ENST00000617024 SIRT2Q8IXJ6 389 aa20.32■□□□□ 0.84
SPTSSB-204ENST00000617024 POLLQ9UGP5 575 aa20.32■□□□□ 0.84
SPTSSB-204ENST00000617024 LEMD3Q9Y2U8 911 aa20.32■□□□□ 0.84
SPTSSB-204ENST00000617024 TAF5LO75529 589 aa20.31■□□□□ 0.84
SPTSSB-204ENST00000617024 POTEIP0CG38 1075 aa20.31■□□□□ 0.84
SPTSSB-204ENST00000617024 POTEJP0CG39 1038 aa20.31■□□□□ 0.84
SPTSSB-204ENST00000617024 ATG9AQ7Z3C6 839 aa20.31■□□□□ 0.84
SPTSSB-204ENST00000617024 TBC1D16Q8TBP0 767 aa20.31■□□□□ 0.84
SPTSSB-204ENST00000617024 VPS33BQ9H267 617 aa20.31■□□□□ 0.84
SPTSSB-204ENST00000617024 PCDHB15Q9Y5E8 787 aa20.31■□□□□ 0.84
SPTSSB-204ENST00000617024 UFL1O94874 794 aa20.3■□□□□ 0.84
SPTSSB-204ENST00000617024 KCNJ4P48050 445 aa20.3■□□□□ 0.84
SPTSSB-204ENST00000617024 EYA3Q99504 573 aa20.3■□□□□ 0.84
SPTSSB-204ENST00000617024 ZNF277Q9NRM2 450 aaPredicted RBP20.3■□□□□ 0.84
SPTSSB-204ENST00000617024 CEP126Q9P2H0 1117 aa20.3■□□□□ 0.84
SPTSSB-204ENST00000617024 NOP58Q9Y2X3 529 aaKnown RBP20.3■□□□□ 0.84
SPTSSB-204ENST00000617024 SNED1Q8TER0 1413 aa20.29■□□□□ 0.84
SPTSSB-204ENST00000617024 OS9Q13438 667 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms