RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 C8orf58Q8NAV2 365 aa18.97■□□□□ 0.63
UBXN1-218ENST00000616865 FAM89AQ96GI7 184 aa18.97■□□□□ 0.63
UBXN1-218ENST00000616865 ZNF408Q9H9D4 720 aa18.97■□□□□ 0.63
UBXN1-218ENST00000616865 ATP5J2-PTCD1G3V325 749 aa18.96■□□□□ 0.63
UBXN1-218ENST00000616865 H7C1D1 291 aa18.96■□□□□ 0.63
UBXN1-218ENST00000616865 DPF2Q92785 391 aa18.96■□□□□ 0.63
UBXN1-218ENST00000616865 DBNDD1Q9H9R9 158 aa18.96■□□□□ 0.63
UBXN1-218ENST00000616865 TSKSQ9UJT2 592 aa18.96■□□□□ 0.63
UBXN1-218ENST00000616865 NSFL1CQ9UNZ2 370 aaKnown RBP18.96■□□□□ 0.63
UBXN1-218ENST00000616865 ZBTB12Q9Y330 459 aaPredicted RBP18.96■□□□□ 0.63
UBXN1-218ENST00000616865 PSMD14O00487 310 aa18.95■□□□□ 0.62
UBXN1-218ENST00000616865 BRPF1P55201 1214 aaPredicted RBP18.95■□□□□ 0.62
UBXN1-218ENST00000616865 CA12O43570 354 aa18.94■□□□□ 0.62
UBXN1-218ENST00000616865 TSPYL6Q8N831 410 aa18.94■□□□□ 0.62
UBXN1-218ENST00000616865 HYPKQ9NX55 129 aa18.94■□□□□ 0.62
UBXN1-218ENST00000616865 POLLQ9UGP5 575 aa18.94■□□□□ 0.62
UBXN1-218ENST00000616865 SCN9AQ15858 1988 aa18.93■□□□□ 0.62
UBXN1-218ENST00000616865 RIMBP2O15034 1052 aa18.93■□□□□ 0.62
UBXN1-218ENST00000616865 ECE2O60344 883 aa18.93■□□□□ 0.62
UBXN1-218ENST00000616865 GPSM2P81274 684 aa18.93■□□□□ 0.62
UBXN1-218ENST00000616865 RTL5Q5HYW3 569 aaPredicted RBP18.93■□□□□ 0.62
UBXN1-218ENST00000616865 SAMD7Q7Z3H4 446 aa18.93■□□□□ 0.62
UBXN1-218ENST00000616865 PSME4Q14997 1843 aa18.93■□□□□ 0.62
UBXN1-218ENST00000616865 RTL9Q8NET4 1388 aa18.93■□□□□ 0.62
UBXN1-218ENST00000616865 C6orf229H3BNL8 230 aa18.92■□□□□ 0.62
UBXN1-218ENST00000616865 IRS4O14654 1257 aaPredicted RBP18.92■□□□□ 0.62
UBXN1-218ENST00000616865 CT47B1P0C2W7 299 aaPredicted RBP18.92■□□□□ 0.62
UBXN1-218ENST00000616865 RPS12P25398 132 aaKnown RBP18.92■□□□□ 0.62
UBXN1-218ENST00000616865 TRIM28Q13263 835 aaKnown RBP18.92■□□□□ 0.62
UBXN1-218ENST00000616865 CCDC30Q5VVM6 783 aa18.92■□□□□ 0.62
UBXN1-218ENST00000616865 USP48Q86UV5 1035 aa18.92■□□□□ 0.62
UBXN1-218ENST00000616865 EYA3Q99504 573 aa18.92■□□□□ 0.62
UBXN1-218ENST00000616865 STK31Q9BXU1 1019 aa18.92■□□□□ 0.62
UBXN1-218ENST00000616865 EGFRP00533 1210 aa18.91■□□□□ 0.62
UBXN1-218ENST00000616865 HUNKP57058 714 aa18.91■□□□□ 0.62
UBXN1-218ENST00000616865 NOGQ13253 232 aa18.91■□□□□ 0.62
UBXN1-218ENST00000616865 FAM161AQ3B820 660 aa18.91■□□□□ 0.62
UBXN1-218ENST00000616865 TBC1D10BQ4KMP7 808 aaPredicted RBP18.91■□□□□ 0.62
UBXN1-218ENST00000616865 TBC1D16Q8TBP0 767 aa18.91■□□□□ 0.62
UBXN1-218ENST00000616865 POLR2AP24928 1970 aaKnown RBP18.91■□□□□ 0.62
UBXN1-218ENST00000616865 CASP8AP2Q9UKL3 1982 aa18.9■□□□□ 0.62
UBXN1-218ENST00000616865 VAMP4O75379 141 aa18.9■□□□□ 0.62
UBXN1-218ENST00000616865 DLK2Q6UY11 383 aa18.9■□□□□ 0.62
UBXN1-218ENST00000616865 KRT26Q7Z3Y9 468 aa18.9■□□□□ 0.62
UBXN1-218ENST00000616865 CCDC85CA6NKD9 419 aa18.89■□□□□ 0.61
UBXN1-218ENST00000616865 SLC34A2O95436 690 aa18.89■□□□□ 0.61
UBXN1-218ENST00000616865 RPS8P62241 208 aaKnown RBP18.89■□□□□ 0.61
UBXN1-218ENST00000616865 DOK7Q18PE1 504 aa18.89■□□□□ 0.61
UBXN1-218ENST00000616865 ZBTB38Q8NAP3 1195 aaPredicted RBP18.89■□□□□ 0.61
UBXN1-218ENST00000616865 KCNQ5Q9NR82 932 aa18.89■□□□□ 0.61
UBXN1-218ENST00000616865 RIC3Q7Z5B4 369 aa18.88■□□□□ 0.61
UBXN1-218ENST00000616865 ZIC5Q96T25 663 aa18.88■□□□□ 0.61
UBXN1-218ENST00000616865 PODXL2Q9NZ53 605 aa18.88■□□□□ 0.61
UBXN1-218ENST00000616865 ZNF609O15014 1411 aa18.88■□□□□ 0.61
UBXN1-218ENST00000616865 ADM5C9JUS6 153 aa18.87■□□□□ 0.61
UBXN1-218ENST00000616865 KIF4BQ2VIQ3 1234 aa18.87■□□□□ 0.61
UBXN1-218ENST00000616865 DCPSQ96C86 337 aaKnown RBP18.87■□□□□ 0.61
UBXN1-218ENST00000616865 MCOLN1Q9GZU1 580 aa18.87■□□□□ 0.61
UBXN1-218ENST00000616865 PHAXQ9H814 394 aaKnown RBP18.87■□□□□ 0.61
UBXN1-218ENST00000616865 GBA2Q9HCG7 927 aaPredicted RBP18.87■□□□□ 0.61
UBXN1-218ENST00000616865 SEC31BQ9NQW1 1179 aa18.87■□□□□ 0.61
UBXN1-218ENST00000616865 FAM155AB1AL88 458 aaPredicted RBP18.86■□□□□ 0.61
UBXN1-218ENST00000616865 UFL1O94874 794 aa18.86■□□□□ 0.61
UBXN1-218ENST00000616865 CENPBP07199 599 aaPredicted RBP18.86■□□□□ 0.61
UBXN1-218ENST00000616865 HSP90B1P14625 803 aaKnown RBP18.86■□□□□ 0.61
UBXN1-218ENST00000616865 RBM26Q5T8P6 1007 aaKnown RBP18.86■□□□□ 0.61
UBXN1-218ENST00000616865 RGMBQ6NW40 437 aa18.86■□□□□ 0.61
UBXN1-218ENST00000616865 MYD88Q99836 296 aa18.86■□□□□ 0.61
UBXN1-218ENST00000616865 ZC3H12CQ9C0D7 883 aaKnown RBP18.86■□□□□ 0.61
UBXN1-218ENST00000616865 VIL1P09327 827 aaKnown RBP18.85■□□□□ 0.61
UBXN1-218ENST00000616865 C2orf69Q8N8R5 385 aa18.85■□□□□ 0.61
UBXN1-218ENST00000616865 SMC4Q9NTJ3 1288 aa18.85■□□□□ 0.61
UBXN1-218ENST00000616865 GGA3Q9NZ52 723 aa18.85■□□□□ 0.61
UBXN1-218ENST00000616865 SPEF2Q9C093 1822 aa18.85■□□□□ 0.61
UBXN1-218ENST00000616865 MYH3P11055 1940 aa18.84■□□□□ 0.61
UBXN1-218ENST00000616865 PCCAP05165 728 aaPredicted RBP18.84■□□□□ 0.61
UBXN1-218ENST00000616865 RGS19P49795 217 aa18.84■□□□□ 0.61
UBXN1-218ENST00000616865 ALDH1L2Q3SY69 923 aa18.84■□□□□ 0.61
UBXN1-218ENST00000616865 CCDC152Q4G0S7 254 aa18.84■□□□□ 0.61
UBXN1-218ENST00000616865 CCDC191Q8NCU4 936 aa18.84■□□□□ 0.61
UBXN1-218ENST00000616865 ANKIB1Q9P2G1 1089 aa18.84■□□□□ 0.61
UBXN1-218ENST00000616865 GGA1Q9UJY5 639 aa18.84■□□□□ 0.61
UBXN1-218ENST00000616865 RCAN3Q9UKA8 241 aa18.84■□□□□ 0.61
UBXN1-218ENST00000616865 AKAP11Q9UKA4 1901 aa18.83■□□□□ 0.6
UBXN1-218ENST00000616865 PDE8AO60658 829 aa18.83■□□□□ 0.6
UBXN1-218ENST00000616865 SLC4A2P04920 1241 aa18.83■□□□□ 0.6
UBXN1-218ENST00000616865 MLLT1Q03111 559 aaPredicted RBP18.83■□□□□ 0.6
UBXN1-218ENST00000616865 SULF1Q8IWU6 871 aa18.83■□□□□ 0.6
UBXN1-218ENST00000616865 ZNF646O15015 1829 aaPredicted RBP18.83■□□□□ 0.6
UBXN1-218ENST00000616865 ASTN2O75129 1339 aaPredicted RBP18.82■□□□□ 0.6
UBXN1-218ENST00000616865 G3V3G9 751 aa18.82■□□□□ 0.6
UBXN1-218ENST00000616865 RARSP54136 660 aaKnown RBP18.82■□□□□ 0.6
UBXN1-218ENST00000616865 DGKZQ13574 1117 aa18.82■□□□□ 0.6
UBXN1-218ENST00000616865 DCAF8Q5TAQ9 597 aa18.82■□□□□ 0.6
UBXN1-218ENST00000616865 SSH1Q8WYL5 1049 aa18.82■□□□□ 0.6
UBXN1-218ENST00000616865 CCDC102AQ96A19 550 aa18.82■□□□□ 0.6
UBXN1-218ENST00000616865 CWC25Q9NXE8 425 aaPredicted RBP18.82■□□□□ 0.6
UBXN1-218ENST00000616865 SAGE1Q9NXZ1 904 aa18.82■□□□□ 0.6
UBXN1-218ENST00000616865 PAPPA2Q9BXP8 1791 aa18.82■□□□□ 0.6
UBXN1-218ENST00000616865 XDHP47989 1333 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms