RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 ISY1Q9ULR0 285 aaKnown RBP12.48□□□□□ -0.41
LINC00598-207ENST00000616706 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
LINC00598-207ENST00000616706 RREB1Q92766 1687 aa12.48□□□□□ -0.41
LINC00598-207ENST00000616706 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
LINC00598-207ENST00000616706 BRD1O95696 1058 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
LINC00598-207ENST00000616706 ZNF827Q17R98 1081 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 TBC1D9BQ66K14 1250 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 FAM227BQ96M60 508 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 TAF1LQ8IZX4 1826 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 CCDC171Q6TFL3 1326 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 AK2P54819 239 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 NMIQ13287 307 aaPredicted RBP12.47□□□□□ -0.41
LINC00598-207ENST00000616706 FOXD4L5Q5VV16 416 aaPredicted RBP12.47□□□□□ -0.41
LINC00598-207ENST00000616706 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 FOXD4L4Q8WXT5 416 aaPredicted RBP12.47□□□□□ -0.41
LINC00598-207ENST00000616706 UTP14AQ9BVJ6 771 aaKnown RBP12.47□□□□□ -0.41
LINC00598-207ENST00000616706 BOLA2Q9H3K6 86 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 MYH3P11055 1940 aa12.47□□□□□ -0.41
LINC00598-207ENST00000616706 CPA1P15085 419 aa12.46□□□□□ -0.41
LINC00598-207ENST00000616706 ADRA2BP18089 450 aa12.46□□□□□ -0.41
LINC00598-207ENST00000616706 BAG6P46379 1132 aa12.46□□□□□ -0.41
LINC00598-207ENST00000616706 FOXO4P98177 505 aa12.46□□□□□ -0.41
LINC00598-207ENST00000616706 PARP10Q53GL7 1025 aa12.46□□□□□ -0.41
LINC00598-207ENST00000616706 KCNB2Q92953 911 aa12.46□□□□□ -0.41
LINC00598-207ENST00000616706 NUP98P52948 1817 aa12.46□□□□□ -0.42
LINC00598-207ENST00000616706 RPAP1Q9BWH6 1393 aaPredicted RBP12.46□□□□□ -0.42
LINC00598-207ENST00000616706 MED23Q9ULK4 1368 aa12.46□□□□□ -0.42
LINC00598-207ENST00000616706 A0A0D9SFI3 127 aa12.46□□□□□ -0.42
LINC00598-207ENST00000616706 IRS4O14654 1257 aaPredicted RBP12.46□□□□□ -0.42
LINC00598-207ENST00000616706 CASTP20810 708 aaKnown RBP12.46□□□□□ -0.42
LINC00598-207ENST00000616706 TFCP2Q12800 502 aa12.46□□□□□ -0.42
LINC00598-207ENST00000616706 ADCK5Q3MIX3 580 aa12.46□□□□□ -0.42
LINC00598-207ENST00000616706 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.42
LINC00598-207ENST00000616706 RUFY3Q7L099 469 aa12.46□□□□□ -0.42
LINC00598-207ENST00000616706 AKT1S1Q96B36 256 aa12.46□□□□□ -0.42
LINC00598-207ENST00000616706 CCDC85AQ96PX6 553 aaPredicted RBP12.46□□□□□ -0.42
LINC00598-207ENST00000616706 SETDB2Q96T68 719 aa12.46□□□□□ -0.42
LINC00598-207ENST00000616706 SNRKQ9NRH2 765 aa12.46□□□□□ -0.42
LINC00598-207ENST00000616706 DBNLQ9UJU6 430 aaKnown RBP12.46□□□□□ -0.42
LINC00598-207ENST00000616706 NECTIN1Q15223 517 aa12.45□□□□□ -0.42
LINC00598-207ENST00000616706 TNNI3KQ59H18 835 aa12.45□□□□□ -0.42
LINC00598-207ENST00000616706 FPGT-TNNI3KV9GXZ4 949 aa12.45□□□□□ -0.42
LINC00598-207ENST00000616706 HIP1O00291 1037 aa12.44□□□□□ -0.42
LINC00598-207ENST00000616706 PRPF40AO75400 957 aaKnown RBP12.44□□□□□ -0.42
LINC00598-207ENST00000616706 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
LINC00598-207ENST00000616706 GTF2E1P29083 439 aaPredicted RBP12.44□□□□□ -0.42
LINC00598-207ENST00000616706 GPT2Q8TD30 523 aa12.44□□□□□ -0.42
LINC00598-207ENST00000616706 LARP6Q9BRS8 491 aaKnown RBP12.44□□□□□ -0.42
LINC00598-207ENST00000616706 FSD1Q9BTV5 496 aa12.44□□□□□ -0.42
LINC00598-207ENST00000616706 RBM8AQ9Y5S9 174 aaKnown RBP12.44□□□□□ -0.42
LINC00598-207ENST00000616706 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
LINC00598-207ENST00000616706 MYH7P12883 1935 aa12.44□□□□□ -0.42
LINC00598-207ENST00000616706 LARGE1O95461 756 aa12.44□□□□□ -0.42
LINC00598-207ENST00000616706 MAP4K1Q92918 833 aa12.44□□□□□ -0.42
LINC00598-207ENST00000616706 EDC3Q96F86 508 aaKnown RBP12.44□□□□□ -0.42
LINC00598-207ENST00000616706 SPEF2Q9C093 1822 aa12.43□□□□□ -0.42
LINC00598-207ENST00000616706 NTSR2O95665 410 aa12.43□□□□□ -0.42
LINC00598-207ENST00000616706 CAVIN1Q6NZI2 390 aaKnown RBP12.43□□□□□ -0.42
LINC00598-207ENST00000616706 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
LINC00598-207ENST00000616706 JAKMIP1Q96N16 626 aaKnown RBP12.43□□□□□ -0.42
LINC00598-207ENST00000616706 TNS1Q9HBL0 1735 aaKnown RBP12.43□□□□□ -0.42
LINC00598-207ENST00000616706 GYS1P13807 737 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 ATP5JP18859 108 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 CREB3L3Q68CJ9 461 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
LINC00598-207ENST00000616706 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 TM6SF1Q9BZW5 370 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 ZSWIM6Q9HCJ5 1215 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 LIMCH1Q9UPQ0 1083 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 CDHR2Q9BYE9 1310 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 RGL2O15211 777 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 PDE8AO60658 829 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 NCLP19338 710 aaKnown RBP12.42□□□□□ -0.42
LINC00598-207ENST00000616706 COL9A3Q14050 684 aaPredicted RBP12.42□□□□□ -0.42
LINC00598-207ENST00000616706 NFIXQ14938 502 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 ERFEQ4G0M1 354 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 ZNF589Q86UQ0 364 aaPredicted RBP12.42□□□□□ -0.42
LINC00598-207ENST00000616706 FAM43AQ8N2R8 423 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 DBNDD2Q9BQY9 259 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 PLA2G12BQ9BX93 195 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
LINC00598-207ENST00000616706 STK32BQ9NY57 414 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
LINC00598-207ENST00000616706 NDUFB9Q9Y6M9 179 aa12.42□□□□□ -0.42
LINC00598-207ENST00000616706 ZNF609O15014 1411 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 NPHP1O15259 732 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 ZNF445P59923 1031 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 SLC15A2Q16348 729 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 CCDC57Q2TAC2 916 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 ZSCAN23Q3MJ62 389 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 ATG9AQ7Z3C6 839 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 TTLL11Q8NHH1 800 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 ZNF594Q96JF6 807 aaPredicted RBP12.41□□□□□ -0.42
LINC00598-207ENST00000616706 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
LINC00598-207ENST00000616706 RFX7Q2KHR2 1363 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 SLC27A2O14975 620 aa12.41□□□□□ -0.42
LINC00598-207ENST00000616706 CSF1RP07333 972 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms