RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 TBC1D16Q8TBP0 767 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 BSDC1Q9NW68 430 aaPredicted RBP13.22□□□□□ -0.29
LINC00649-217ENST00000616030 RCAN3Q9UKA8 241 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 XDHP47989 1333 aa13.21□□□□□ -0.29
LINC00649-217ENST00000616030 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
LINC00649-217ENST00000616030 POTEJP0CG39 1038 aa13.21□□□□□ -0.29
LINC00649-217ENST00000616030 WASHC4Q2M389 1173 aa13.21□□□□□ -0.29
LINC00649-217ENST00000616030 ANKRD18AQ8IVF6 992 aa13.21□□□□□ -0.29
LINC00649-217ENST00000616030 MRPL50Q8N5N7 158 aaKnown RBP13.21□□□□□ -0.29
LINC00649-217ENST00000616030 EYA3Q99504 573 aa13.21□□□□□ -0.29
LINC00649-217ENST00000616030 GREM2Q9H772 168 aa13.21□□□□□ -0.29
LINC00649-217ENST00000616030 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
LINC00649-217ENST00000616030 F6X3S4 739 aa13.2□□□□□ -0.3
LINC00649-217ENST00000616030 NEFLP07196 543 aa13.2□□□□□ -0.3
LINC00649-217ENST00000616030 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
LINC00649-217ENST00000616030 JARID2Q92833 1246 aaPredicted RBP13.2□□□□□ -0.3
LINC00649-217ENST00000616030 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
LINC00649-217ENST00000616030 NSFL1CQ9UNZ2 370 aaKnown RBP13.2□□□□□ -0.3
LINC00649-217ENST00000616030 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
LINC00649-217ENST00000616030 GRM8O00222 908 aa13.19□□□□□ -0.3
LINC00649-217ENST00000616030 FOXO4P98177 505 aa13.19□□□□□ -0.3
LINC00649-217ENST00000616030 TNIP1Q15025 636 aa13.19□□□□□ -0.3
LINC00649-217ENST00000616030 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
LINC00649-217ENST00000616030 USP50Q70EL3 339 aaPredicted RBP13.19□□□□□ -0.3
LINC00649-217ENST00000616030 GGA1Q9UJY5 639 aa13.19□□□□□ -0.3
LINC00649-217ENST00000616030 ITGBL1O95965 494 aaPredicted RBP13.18□□□□□ -0.3
LINC00649-217ENST00000616030 ITGA6P23229 1130 aa13.18□□□□□ -0.3
LINC00649-217ENST00000616030 ATP2B4P23634 1241 aa13.18□□□□□ -0.3
LINC00649-217ENST00000616030 LMOD1P29536 600 aaPredicted RBP13.18□□□□□ -0.3
LINC00649-217ENST00000616030 FAM161AQ3B820 660 aa13.18□□□□□ -0.3
LINC00649-217ENST00000616030 JMYQ8N9B5 988 aa13.18□□□□□ -0.3
LINC00649-217ENST00000616030 SSH1Q8WYL5 1049 aa13.18□□□□□ -0.3
LINC00649-217ENST00000616030 DPF2Q92785 391 aa13.18□□□□□ -0.3
LINC00649-217ENST00000616030 MINPP1Q9UNW1 487 aa13.18□□□□□ -0.3
LINC00649-217ENST00000616030 ECE2O60344 883 aa13.17□□□□□ -0.3
LINC00649-217ENST00000616030 UFL1O94874 794 aa13.17□□□□□ -0.3
LINC00649-217ENST00000616030 RPS12P25398 132 aaKnown RBP13.17□□□□□ -0.3
LINC00649-217ENST00000616030 EPS15P42566 896 aa13.17□□□□□ -0.3
LINC00649-217ENST00000616030 KLRG1Q96E93 195 aa13.17□□□□□ -0.3
LINC00649-217ENST00000616030 SRCIN1Q9C0H9 1055 aa13.17□□□□□ -0.3
LINC00649-217ENST00000616030 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
LINC00649-217ENST00000616030 ADARB2Q9NS39 739 aaKnown RBP13.17□□□□□ -0.3
LINC00649-217ENST00000616030 PGAP2Q9UHJ9 254 aa13.17□□□□□ -0.3
LINC00649-217ENST00000616030 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
LINC00649-217ENST00000616030 IRS2Q9Y4H2 1338 aa13.16□□□□□ -0.3
LINC00649-217ENST00000616030 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
LINC00649-217ENST00000616030 VIL1P09327 827 aaKnown RBP13.16□□□□□ -0.3
LINC00649-217ENST00000616030 GMPSP49915 693 aaPredicted RBP13.16□□□□□ -0.3
LINC00649-217ENST00000616030 RABL6Q3YEC7 729 aaPredicted RBP13.16□□□□□ -0.3
LINC00649-217ENST00000616030 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
LINC00649-217ENST00000616030 ANKIB1Q9P2G1 1089 aa13.16□□□□□ -0.3
LINC00649-217ENST00000616030 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
LINC00649-217ENST00000616030 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
LINC00649-217ENST00000616030 TRPM7Q96QT4 1865 aa13.16□□□□□ -0.3
LINC00649-217ENST00000616030 THSD7BQ9C0I4 1608 aa13.15□□□□□ -0.3
LINC00649-217ENST00000616030 PSMD14O00487 310 aa13.15□□□□□ -0.3
LINC00649-217ENST00000616030 IGHMBP2P38935 993 aaKnown RBP13.15□□□□□ -0.3
LINC00649-217ENST00000616030 CCT4P50991 539 aaKnown RBP13.15□□□□□ -0.3
LINC00649-217ENST00000616030 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.3
LINC00649-217ENST00000616030 PODNQ7Z5L7 613 aa13.15□□□□□ -0.3
LINC00649-217ENST00000616030 ZC3H15Q8WU90 426 aaKnown RBP13.15□□□□□ -0.3
LINC00649-217ENST00000616030 KAZALD1Q96I82 304 aa13.15□□□□□ -0.3
LINC00649-217ENST00000616030 ZC3H12CQ9C0D7 883 aaKnown RBP13.15□□□□□ -0.3
LINC00649-217ENST00000616030 DBNDD1Q9H9R9 158 aa13.15□□□□□ -0.3
LINC00649-217ENST00000616030 ANKRD18BA2A2Z9 1011 aa13.14□□□□□ -0.31
LINC00649-217ENST00000616030 RAD17O75943 681 aa13.14□□□□□ -0.31
LINC00649-217ENST00000616030 EAPPQ56P03 285 aaPredicted RBP13.14□□□□□ -0.31
LINC00649-217ENST00000616030 EPHA10Q5JZY3 1008 aa13.14□□□□□ -0.31
LINC00649-217ENST00000616030 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.14□□□□□ -0.31
LINC00649-217ENST00000616030 ANKRD2Q9GZV1 360 aa13.14□□□□□ -0.31
LINC00649-217ENST00000616030 IFIT5Q13325 482 aaKnown RBP13.13□□□□□ -0.31
LINC00649-217ENST00000616030 ERICH6BQ5W0A0 696 aa13.13□□□□□ -0.31
LINC00649-217ENST00000616030 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
LINC00649-217ENST00000616030 AGBL3Q8NEM8 1001 aa13.13□□□□□ -0.31
LINC00649-217ENST00000616030 GPR101Q96P66 508 aaPredicted RBP13.13□□□□□ -0.31
LINC00649-217ENST00000616030 GMLQ99445 158 aa13.13□□□□□ -0.31
LINC00649-217ENST00000616030 CNTNAP1P78357 1384 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 NBPF7P0C2Y1 421 aaPredicted RBP13.12□□□□□ -0.31
LINC00649-217ENST00000616030 RARSP54136 660 aaKnown RBP13.12□□□□□ -0.31
LINC00649-217ENST00000616030 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
LINC00649-217ENST00000616030 HTRA3P83110 453 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 SLC4A10Q6U841 1118 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 LMBR1LQ6UX01 489 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 SUCLG2Q96I99 432 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 MPHOSPH8Q99549 860 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 COA1Q9GZY4 146 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 SMC4Q9NTJ3 1288 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
LINC00649-217ENST00000616030 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
LINC00649-217ENST00000616030 MMP14P50281 582 aa13.11□□□□□ -0.31
LINC00649-217ENST00000616030 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
LINC00649-217ENST00000616030 ZNF280AP59817 542 aaPredicted RBP13.11□□□□□ -0.31
LINC00649-217ENST00000616030 CHRNDQ07001 517 aa13.11□□□□□ -0.31
LINC00649-217ENST00000616030 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
LINC00649-217ENST00000616030 MAP1SQ66K74 1059 aaPredicted RBP13.11□□□□□ -0.31
LINC00649-217ENST00000616030 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
LINC00649-217ENST00000616030 TRPM4Q8TD43 1214 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms