RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	PPP2R1A	P30153	589 aa		11.42	□□□□□ -0.58
LRTOMT-222	ENST00000615940	CCDC15	Q0P6D6	951 aa		11.42	□□□□□ -0.58
LRTOMT-222	ENST00000615940	PTPRO	Q16827	1216 aa		11.42	□□□□□ -0.58
LRTOMT-222	ENST00000615940	LARP1	Q6PKG0	1096 aa	Known RBP	11.42	□□□□□ -0.58
LRTOMT-222	ENST00000615940	POTEA	Q6S8J7	498 aa		11.42	□□□□□ -0.58
LRTOMT-222	ENST00000615940	FMNL2	Q96PY5	1086 aa		11.42	□□□□□ -0.58
LRTOMT-222	ENST00000615940	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.42	□□□□□ -0.58
LRTOMT-222	ENST00000615940	CALCOCO1	Q9P1Z2	691 aa		11.42	□□□□□ -0.58
LRTOMT-222	ENST00000615940	DIS3	Q9Y2L1	958 aa	Known RBP	11.42	□□□□□ -0.58
LRTOMT-222	ENST00000615940	GLI3	P10071	1580 aa		11.42	□□□□□ -0.58
LRTOMT-222	ENST00000615940	SMG6	Q86US8	1419 aa	Known RBP	11.41	□□□□□ -0.58
LRTOMT-222	ENST00000615940	TPPP	O94811	219 aa		11.41	□□□□□ -0.58
LRTOMT-222	ENST00000615940	PDAP1	Q13442	181 aa	Known RBP	11.41	□□□□□ -0.58
LRTOMT-222	ENST00000615940	ZNF394	Q53GI3	561 aa		11.41	□□□□□ -0.58
LRTOMT-222	ENST00000615940	NEUROD6	Q96NK8	337 aa		11.41	□□□□□ -0.58
LRTOMT-222	ENST00000615940	RTL1	A6NKG5	1358 aa		11.41	□□□□□ -0.58
LRTOMT-222	ENST00000615940	COL19A1	Q14993	1142 aa		11.4	□□□□□ -0.58
LRTOMT-222	ENST00000615940	SOGA3	Q5TF21	947 aa		11.4	□□□□□ -0.58
LRTOMT-222	ENST00000615940	ANKRD24	Q8TF21	1146 aa		11.4	□□□□□ -0.58
LRTOMT-222	ENST00000615940	SLX1A	Q9BQ83	275 aa		11.4	□□□□□ -0.58
LRTOMT-222	ENST00000615940	AKAP2	Q9Y2D5	859 aa		11.4	□□□□□ -0.58
LRTOMT-222	ENST00000615940	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.4	□□□□□ -0.58
LRTOMT-222	ENST00000615940	ATRN	O75882	1429 aa		11.4	□□□□□ -0.58
LRTOMT-222	ENST00000615940	HOXA2	O43364	376 aa		11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	HTATSF1	O43719	755 aa	Known RBP	11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	FOSL1	P15407	271 aa		11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	DNAJC21	Q5F1R6	531 aa	Known RBP	11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	JAKMIP3	Q5VZ66	844 aa		11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	FILIP1	Q7Z7B0	1213 aa		11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	UBE2Q1	Q7Z7E8	422 aa		11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	PHC3	Q8NDX5	983 aa		11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	C17orf50	Q8WW18	174 aa		11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	KCNB2	Q92953	911 aa		11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	GOPC	Q9HD26	462 aa		11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	IVNS1ABP	Q9Y6Y0	642 aa		11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	BLM	P54132	1417 aa	Predicted RBP	11.4	□□□□□ -0.59
LRTOMT-222	ENST00000615940	LMNTD2	Q8IXW0	634 aa		11.39	□□□□□ -0.59
LRTOMT-222	ENST00000615940	INSR	P06213	1382 aa		11.39	□□□□□ -0.59
LRTOMT-222	ENST00000615940	WDR17	Q8IZU2	1322 aa		11.39	□□□□□ -0.59
LRTOMT-222	ENST00000615940	RGPD1	P0DJD0	1748 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	BMS1	Q14692	1282 aa	Known RBP	11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	ZNF772	Q68DY9	489 aa	Predicted RBP	11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	CCDC174	Q6PII3	467 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TOM1L2	Q6ZVM7	507 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	USHBP1	Q8N6Y0	703 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TEKT1	Q969V4	418 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	CCDC102A	Q96A19	550 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	MUC3B	Q9H195	1237 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	RWDD1	Q9H446	243 aa	Predicted RBP	11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	RABL2B	Q9UNT1	228 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	PCDHGA4	Q9Y5G9	962 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	COL3A1	P02461	1466 aa	Predicted RBP	11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	EIF4A2	Q14240	407 aa	Known RBP	11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	VPS72	Q15906	364 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	KIF2C	Q99661	725 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	FAM117A	Q9C073	453 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	NLRP2	Q9NX02	1062 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TRPC5	Q9UL62	973 aa	Predicted RBP	11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	KIF24	Q5T7B8	1368 aa		11.38	□□□□□ -0.59
LRTOMT-222	ENST00000615940	CRB1	P82279	1406 aa		11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TRIM64C	A6NLI5	447 aa		11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	GOLGA6L6	A8MZA4	724 aa		11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	MAN1A1	P33908	653 aa		11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TDRD7	Q8NHU6	1098 aa	Known RBP	11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	MMTAG2	Q9BU76	263 aa	Known RBP	11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	IQCG	Q9H095	443 aa	Known RBP	11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TMA7	Q9Y2S6	64 aa	Known RBP	11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	VIRMA	Q69YN4	1812 aa	Known RBP	11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	SPATA31A1	Q5TZJ5	1347 aa		11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	SPATA31A5	Q5VU36	1347 aa		11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	SPATA31A7	Q8IWB4	1347 aa		11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.37	□□□□□ -0.59
LRTOMT-222	ENST00000615940	CAND2	O75155	1236 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	ABL2	P42684	1182 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	ZNF132	P52740	706 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	NAALADL2	Q58DX5	795 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	NYAP1	Q6ZVC0	841 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TAX1BP1	Q86VP1	789 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	BHMT	Q93088	406 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	GJD4	Q96KN9	370 aa	Predicted RBP	11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	NOL7	Q9UMY1	257 aa	Known RBP	11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TBC1D2B	Q9UPU7	963 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	OAT	P04181	439 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	CD53	P19397	219 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TBX4	P57082	545 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	FAM161A	Q3B820	660 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	EGFLAM	Q63HQ2	1017 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	ANKRD13D	Q6ZTN6	518 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TAF4B	Q92750	862 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	SPACA7	Q96KW9	195 aa		11.36	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TMCO5B	A8MYB1	307 aa		11.35	□□□□□ -0.59
LRTOMT-222	ENST00000615940	HIP1R	O75146	1068 aa		11.35	□□□□□ -0.59
LRTOMT-222	ENST00000615940	ECEL1	O95672	775 aa		11.35	□□□□□ -0.59
LRTOMT-222	ENST00000615940	LMNB1	P20700	586 aa		11.35	□□□□□ -0.59
LRTOMT-222	ENST00000615940	SKIV2L	Q15477	1246 aa	Known RBP	11.35	□□□□□ -0.59
LRTOMT-222	ENST00000615940	FAM98C	Q17RN3	349 aa	Known RBP	11.35	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TRIM74	Q86UV6	250 aa		11.35	□□□□□ -0.59
LRTOMT-222	ENST00000615940	TRIM73	Q86UV7	250 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms