RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 ARHGEF40Q8TER5 1519 aa12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 ATP10DQ9P241 1426 aa12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 PNMA6EA0A0J9YXQ4 647 aa12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 SGSM2O43147 1006 aa12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 CCP110O43303 1012 aa12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 MAP2K2P36507 400 aa12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 XPO4Q9C0E2 1151 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 TDO2P48775 406 aa12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 REXO1L1PQ8IX06 675 aa12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 ZNF622Q969S3 477 aaKnown RBP eCLIP12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 IFT172Q9UG01 1749 aa12.04□□□□□ -0.48
TNFAIP3-208ENST00000615468 ME1P48163 572 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 MMP14P50281 582 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 SARM1Q6SZW1 724 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 PDILTQ8N807 584 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 FAM212AQ96EL1 285 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 PGBD1Q96JS3 809 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 PARD6BQ9BYG5 372 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 ATP8B1O43520 1251 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 TADA3O75528 432 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 EIF4A2Q14240 407 aaKnown RBP12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 PROSER2Q86WR7 435 aaPredicted RBP12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 CNPY4Q8N129 248 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 RUFY2Q8WXA3 655 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 CXorf56Q9H5V9 222 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 AGLP35573 1532 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 IBSPP21815 317 aaPredicted RBP12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 PPP2R3AQ06190 1150 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 LONRF2Q1L5Z9 754 aa12.03□□□□□ -0.48
TNFAIP3-208ENST00000615468 EIF3JO75822 258 aaKnown RBP12.02□□□□□ -0.48
TNFAIP3-208ENST00000615468 GNAI3P08754 354 aa12.02□□□□□ -0.48
TNFAIP3-208ENST00000615468 GPR161Q8N6U8 529 aaKnown RBP12.02□□□□□ -0.48
TNFAIP3-208ENST00000615468 STK31Q9BXU1 1019 aa12.02□□□□□ -0.48
TNFAIP3-208ENST00000615468 SSH2Q76I76 1423 aa12.02□□□□□ -0.48
TNFAIP3-208ENST00000615468 PSDA5PKW4 1024 aaPredicted RBP12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 H3BQF6 201 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 PPFIA3O75145 1194 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 CCT4P50991 539 aaKnown RBP12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 VPS53Q5VIR6 699 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 JAKMIP3Q5VZ66 844 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 G2E3Q7L622 706 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 TPCN1Q9ULQ1 816 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 LMOD1P29536 600 aaPredicted RBP12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 CCDC93Q567U6 631 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 CCDC30Q5VVM6 783 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 ATG3Q9NT62 314 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 CFAP45Q9UL16 551 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 FAN1Q9Y2M0 1017 aa12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 ARHGEF28Q8N1W1 1705 aaKnown RBP12.02□□□□□ -0.49
TNFAIP3-208ENST00000615468 DDX17Q92841 729 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 CTAGE5O15320 804 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 SERPINC1P01008 464 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 SF3A1Q15459 793 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 PTPN21Q16825 1174 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 ARMCX5Q6P1M9 558 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 LSG1Q9H089 658 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 TBX22Q9Y458 520 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 KIF13AQ9H1H9 1805 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 ZC3H13Q5T200 1668 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 IL13P35225 146 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 GOLGA8FQ08AF8 430 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 GOLGA8DPQ0D2H9 430 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 MCTP2Q6DN12 878 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 FSIP1Q8NA03 581 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 KIF24Q5T7B8 1368 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 PLEKHG2Q9H7P9 1386 aa12.01□□□□□ -0.49
TNFAIP3-208ENST00000615468 SRGAP3O43295 1099 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 ZNF853P0CG23 659 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 BLOC1S2Q6QNY1 142 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 ORAI2Q96SN7 254 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 SIL1Q9H173 461 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 PUF60Q9UHX1 559 aaKnown RBP12□□□□□ -0.49
TNFAIP3-208ENST00000615468 SETQ01105 290 aaPredicted RBP12□□□□□ -0.49
TNFAIP3-208ENST00000615468 PTH1RQ03431 593 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 CFAP100Q494V2 611 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 ZSCAN12O43309 604 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 TUBB4AP04350 444 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 LIG3P49916 1009 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 WWC2Q6AWC2 1192 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 MMS22LQ6ZRQ5 1243 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 GOLGA1Q92805 767 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 BRF1Q92994 677 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 FUT8Q9BYC5 575 aa12□□□□□ -0.49
TNFAIP3-208ENST00000615468 CCDC12Q8WUD4 166 aaPredicted RBP11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 IMPACTQ9P2X3 320 aa11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 SUFUQ9UMX1 484 aa11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 MAP3K19Q56UN5 1328 aa11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 NEURL4Q96JN8 1562 aa11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 ERLIN1O75477 346 aa11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 PHF8Q9UPP1 1060 aa11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 ADAMTS13Q76LX8 1427 aa11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 SPATA31D1Q6ZQQ2 1576 aa11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 H0YHG0 523 aa11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 DHX40Q8IX18 779 aaKnown RBP11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 FTOQ9C0B1 505 aaKnown RBP eCLIP11.99□□□□□ -0.49
TNFAIP3-208ENST00000615468 RABEP2Q9H5N1 569 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms