RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 H3BQV1 296 aa11.66□□□□□ -0.54
RDM1-218ENST00000615288 KINO60870 393 aaKnown RBP11.66□□□□□ -0.54
RDM1-218ENST00000615288 TNNT1P13805 278 aa11.66□□□□□ -0.54
RDM1-218ENST00000615288 KCNA6P17658 529 aa11.66□□□□□ -0.54
RDM1-218ENST00000615288 GCKRQ14397 625 aa11.66□□□□□ -0.54
RDM1-218ENST00000615288 MCMDC2Q4G0Z9 681 aa11.66□□□□□ -0.54
RDM1-218ENST00000615288 IFFO2Q5TF58 517 aa11.66□□□□□ -0.54
RDM1-218ENST00000615288 NYAP1Q6ZVC0 841 aa11.66□□□□□ -0.54
RDM1-218ENST00000615288 ZNF274Q96GC6 653 aaPredicted RBP11.66□□□□□ -0.54
RDM1-218ENST00000615288 PGBD1Q96JS3 809 aa11.66□□□□□ -0.54
RDM1-218ENST00000615288 OSBPL5Q9H0X9 879 aaPredicted RBP11.66□□□□□ -0.54
RDM1-218ENST00000615288 NR1I2O75469 434 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 YEATS4O95619 227 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 PDIA6Q15084 440 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 TNNI3KQ59H18 835 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 DHX32Q7L7V1 743 aaKnown RBP11.65□□□□□ -0.54
RDM1-218ENST00000615288 LRRC8AQ8IWT6 810 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 DRC7Q8IY82 874 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 KBTBD3Q8NAB2 608 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 SPC24Q8NBT2 197 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 ZNF397Q8NF99 534 aaPredicted RBP11.65□□□□□ -0.54
RDM1-218ENST00000615288 ERO1AQ96HE7 468 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 DDX41Q9UJV9 622 aaKnown RBP11.65□□□□□ -0.54
RDM1-218ENST00000615288 FPGT-TNNI3KV9GXZ4 949 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 NUP188Q5SRE5 1749 aa11.65□□□□□ -0.54
RDM1-218ENST00000615288 LAMA4Q16363 1823 aa11.65□□□□□ -0.55
RDM1-218ENST00000615288 MAP3K15Q6ZN16 1313 aa11.64□□□□□ -0.55
RDM1-218ENST00000615288 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
RDM1-218ENST00000615288 IGKV5-2P06315 115 aa11.64□□□□□ -0.55
RDM1-218ENST00000615288 ADD1P35611 737 aaKnown RBP11.64□□□□□ -0.55
RDM1-218ENST00000615288 RFX5P48382 616 aaPredicted RBP11.64□□□□□ -0.55
RDM1-218ENST00000615288 TPM4P67936 248 aa11.64□□□□□ -0.55
RDM1-218ENST00000615288 CEP135Q66GS9 1140 aa11.64□□□□□ -0.55
RDM1-218ENST00000615288 BRAPQ7Z569 592 aa11.64□□□□□ -0.55
RDM1-218ENST00000615288 C17orf53Q8N3J3 647 aaPredicted RBP11.64□□□□□ -0.55
RDM1-218ENST00000615288 NSUN7Q8NE18 718 aaKnown RBP11.64□□□□□ -0.55
RDM1-218ENST00000615288 ENGASEQ8NFI3 743 aa11.64□□□□□ -0.55
RDM1-218ENST00000615288 KCNG4Q8TDN1 519 aa11.64□□□□□ -0.55
RDM1-218ENST00000615288 CTNNA3Q9UI47 895 aa11.64□□□□□ -0.55
RDM1-218ENST00000615288 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
RDM1-218ENST00000615288 PA2G4Q9UQ80 394 aaKnown RBP11.64□□□□□ -0.55
RDM1-218ENST00000615288 MORC2Q9Y6X9 1032 aaPredicted RBP11.64□□□□□ -0.55
RDM1-218ENST00000615288 PAPPAQ13219 1627 aa11.64□□□□□ -0.55
RDM1-218ENST00000615288 TJP1Q07157 1748 aa11.63□□□□□ -0.55
RDM1-218ENST00000615288 KDM6AO15550 1401 aaPredicted RBP11.63□□□□□ -0.55
RDM1-218ENST00000615288 DHX16O60231 1041 aaKnown RBP11.63□□□□□ -0.55
RDM1-218ENST00000615288 TPD52L1Q16890 204 aaPredicted RBP11.63□□□□□ -0.55
RDM1-218ENST00000615288 CWF19L2Q2TBE0 894 aaKnown RBP11.63□□□□□ -0.55
RDM1-218ENST00000615288 ZNF589Q86UQ0 364 aaPredicted RBP11.63□□□□□ -0.55
RDM1-218ENST00000615288 FERMT3Q86UX7 667 aa11.63□□□□□ -0.55
RDM1-218ENST00000615288 USHBP1Q8N6Y0 703 aa11.63□□□□□ -0.55
RDM1-218ENST00000615288 CACTINQ8WUQ7 758 aaKnown RBP11.63□□□□□ -0.55
RDM1-218ENST00000615288 LTV1Q96GA3 475 aaPredicted RBP11.63□□□□□ -0.55
RDM1-218ENST00000615288 BCL11BQ9C0K0 894 aaPredicted RBP11.63□□□□□ -0.55
RDM1-218ENST00000615288 DNAJC25Q9H1X3 360 aa11.63□□□□□ -0.55
RDM1-218ENST00000615288 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
RDM1-218ENST00000615288 RTEL1Q9NZ71 1219 aa11.63□□□□□ -0.55
RDM1-218ENST00000615288 UBR2Q8IWV8 1755 aa11.63□□□□□ -0.55
RDM1-218ENST00000615288 COL22A1Q8NFW1 1626 aaPredicted RBP11.62□□□□□ -0.55
RDM1-218ENST00000615288 BECN2A8MW95 431 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 KCNQ3O43525 872 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 EXOSC10Q01780 885 aaKnown RBP11.62□□□□□ -0.55
RDM1-218ENST00000615288 PTPN14Q15678 1187 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 PROSER3Q2NL68 480 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 Q6ZUG5 572 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 RIC3Q7Z5B4 369 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 FCHSD1Q86WN1 690 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 CKAP2LQ8IYA6 745 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 KIF18AQ8NI77 898 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 MRPS27Q92552 414 aaKnown RBP11.62□□□□□ -0.55
RDM1-218ENST00000615288 NOL10Q9BSC4 688 aaKnown RBP11.62□□□□□ -0.55
RDM1-218ENST00000615288 BOLA2Q9H3K6 86 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 FAM53CQ9NYF3 392 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 DBNLQ9UJU6 430 aaKnown RBP11.62□□□□□ -0.55
RDM1-218ENST00000615288 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 ADAMTSL3P82987 1691 aa11.62□□□□□ -0.55
RDM1-218ENST00000615288 PTPDC1A2A3K4 754 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 IKBKBO14920 756 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 CIAO1O76071 339 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 ZFYP08048 801 aaPredicted RBP11.61□□□□□ -0.55
RDM1-218ENST00000615288 CYP21A2P08686 494 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 HSP90B1P14625 803 aaKnown RBP11.61□□□□□ -0.55
RDM1-218ENST00000615288 CCZ1BP86790 482 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 CCZ1P86791 482 aaPredicted RBP11.61□□□□□ -0.55
RDM1-218ENST00000615288 PTPN12Q05209 780 aaKnown RBP11.61□□□□□ -0.55
RDM1-218ENST00000615288 CAMK4Q16566 473 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 ATP2B3Q16720 1220 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 ZMYM1Q5SVZ6 1142 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 ADALQ6DHV7 355 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 ZNF790Q6PG37 636 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 MPRIPQ6WCQ1 1025 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
RDM1-218ENST00000615288 ANKRD24Q8TF21 1146 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 C16orf45Q96MC5 204 aaPredicted RBP11.61□□□□□ -0.55
RDM1-218ENST00000615288 TIGD1Q96MW7 591 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
RDM1-218ENST00000615288 CCDC8Q9H0W5 538 aaPredicted RBP11.61□□□□□ -0.55
RDM1-218ENST00000615288 L2HGDHQ9H9P8 463 aa11.61□□□□□ -0.55
RDM1-218ENST00000615288 SLC52A2Q9HAB3 445 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms