RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 TEX13AQ9BXU3 409 aaPredicted RBP9.63□□□□□ -0.87
FAM228B-209ENST00000615135 CDHR2Q9BYE9 1310 aa9.62□□□□□ -0.87
FAM228B-209ENST00000615135 NPHP1O15259 732 aa9.62□□□□□ -0.87
FAM228B-209ENST00000615135 RNMTO43148 476 aaKnown RBP9.62□□□□□ -0.87
FAM228B-209ENST00000615135 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
FAM228B-209ENST00000615135 HIRAP54198 1017 aaPredicted RBP9.62□□□□□ -0.87
FAM228B-209ENST00000615135 NOM1Q5C9Z4 860 aaKnown RBP9.62□□□□□ -0.87
FAM228B-209ENST00000615135 NBPF5PQ86XG9 351 aaPredicted RBP9.62□□□□□ -0.87
FAM228B-209ENST00000615135 AEBP1Q8IUX7 1158 aa9.62□□□□□ -0.87
FAM228B-209ENST00000615135 KIAA0100Q14667 2235 aaKnown RBP9.62□□□□□ -0.87
FAM228B-209ENST00000615135 DLG5Q8TDM6 1919 aa9.61□□□□□ -0.87
FAM228B-209ENST00000615135 CRY2Q49AN0 593 aa9.61□□□□□ -0.87
FAM228B-209ENST00000615135 FBXO46Q6PJ61 603 aaPredicted RBP9.61□□□□□ -0.87
FAM228B-209ENST00000615135 TPTE2Q6XPS3 522 aa9.61□□□□□ -0.87
FAM228B-209ENST00000615135 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
FAM228B-209ENST00000615135 LARGE2Q8N3Y3 721 aa9.61□□□□□ -0.87
FAM228B-209ENST00000615135 OTUD5Q96G74 571 aa9.61□□□□□ -0.87
FAM228B-209ENST00000615135 VPS33BQ9H267 617 aa9.61□□□□□ -0.87
FAM228B-209ENST00000615135 ZNF408Q9H9D4 720 aa9.61□□□□□ -0.87
FAM228B-209ENST00000615135 CEP290O15078 2479 aa9.61□□□□□ -0.87
FAM228B-209ENST00000615135 SLC10A3P09131 477 aa9.6□□□□□ -0.87
FAM228B-209ENST00000615135 ERICH6BQ5W0A0 696 aa9.6□□□□□ -0.87
FAM228B-209ENST00000615135 SLC17A8Q8NDX2 589 aa9.6□□□□□ -0.87
FAM228B-209ENST00000615135 DDX12PQ92771 950 aa9.6□□□□□ -0.87
FAM228B-209ENST00000615135 HOXA10P31260 410 aaPredicted RBP9.59□□□□□ -0.87
FAM228B-209ENST00000615135 GMPSP49915 693 aaPredicted RBP9.59□□□□□ -0.87
FAM228B-209ENST00000615135 ZNF157P51786 506 aaPredicted RBP9.59□□□□□ -0.87
FAM228B-209ENST00000615135 CXCL9Q07325 125 aa9.59□□□□□ -0.87
FAM228B-209ENST00000615135 C3orf67Q6ZVT6 689 aa9.59□□□□□ -0.87
FAM228B-209ENST00000615135 NIM1KQ8IY84 436 aa9.59□□□□□ -0.87
FAM228B-209ENST00000615135 ZNF296Q8WUU4 475 aaPredicted RBP9.59□□□□□ -0.87
FAM228B-209ENST00000615135 GBA2Q9HCG7 927 aaPredicted RBP9.59□□□□□ -0.87
FAM228B-209ENST00000615135 SALL2Q9Y467 1007 aaPredicted RBP9.59□□□□□ -0.87
FAM228B-209ENST00000615135 INTS3Q68E01 1043 aaKnown RBP9.58□□□□□ -0.88
FAM228B-209ENST00000615135 SULT6B1Q6IMI4 303 aa9.58□□□□□ -0.88
FAM228B-209ENST00000615135 USP48Q86UV5 1035 aa9.58□□□□□ -0.88
FAM228B-209ENST00000615135 MORC1Q86VD1 984 aa9.58□□□□□ -0.88
FAM228B-209ENST00000615135 C2orf69Q8N8R5 385 aa9.58□□□□□ -0.88
FAM228B-209ENST00000615135 ZNF496Q96IT1 587 aaPredicted RBP9.58□□□□□ -0.88
FAM228B-209ENST00000615135 CFAP53Q96M91 514 aa9.58□□□□□ -0.88
FAM228B-209ENST00000615135 HDAC9Q9UKV0 1011 aa9.58□□□□□ -0.88
FAM228B-209ENST00000615135 ZNRF3Q9ULT6 936 aa9.58□□□□□ -0.88
FAM228B-209ENST00000615135 HEG1Q9ULI3 1381 aa9.58□□□□□ -0.88
FAM228B-209ENST00000615135 POLR2AP24928 1970 aaKnown RBP9.57□□□□□ -0.88
FAM228B-209ENST00000615135 GPR37O15354 613 aa9.57□□□□□ -0.88
FAM228B-209ENST00000615135 A1BGP04217 495 aa9.57□□□□□ -0.88
FAM228B-209ENST00000615135 OSBPP22059 807 aa9.57□□□□□ -0.88
FAM228B-209ENST00000615135 DZIP3Q86Y13 1208 aaKnown RBP9.57□□□□□ -0.88
FAM228B-209ENST00000615135 TRPM4Q8TD43 1214 aa9.57□□□□□ -0.88
FAM228B-209ENST00000615135 PPP4R2Q9NY27 417 aa9.57□□□□□ -0.88
FAM228B-209ENST00000615135 MKI67P46013 3256 aaKnown RBP9.57□□□□□ -0.88
FAM228B-209ENST00000615135 RBBP6Q7Z6E9 1792 aaKnown RBP9.57□□□□□ -0.88
FAM228B-209ENST00000615135 EVI5O60447 810 aa9.56□□□□□ -0.88
FAM228B-209ENST00000615135 DLK2Q6UY11 383 aa9.56□□□□□ -0.88
FAM228B-209ENST00000615135 MAMSTRQ6ZN01 415 aa9.56□□□□□ -0.88
FAM228B-209ENST00000615135 NPM2Q86SE8 214 aaKnown RBP9.56□□□□□ -0.88
FAM228B-209ENST00000615135 TTC5Q8N0Z6 440 aa9.56□□□□□ -0.88
FAM228B-209ENST00000615135 CFHR5Q9BXR6 569 aa9.56□□□□□ -0.88
FAM228B-209ENST00000615135 ZNF652Q9Y2D9 606 aa9.56□□□□□ -0.88
FAM228B-209ENST00000615135 A0A0C4DFX4 3053 aa9.56□□□□□ -0.88
FAM228B-209ENST00000615135 SZT2Q5T011 3432 aa9.55□□□□□ -0.88
FAM228B-209ENST00000615135 GPR25O00155 361 aa9.55□□□□□ -0.88
FAM228B-209ENST00000615135 PPIP5K2O43314 1243 aa9.55□□□□□ -0.88
FAM228B-209ENST00000615135 NEUROD2Q15784 382 aa9.55□□□□□ -0.88
FAM228B-209ENST00000615135 ZNF790Q6PG37 636 aa9.55□□□□□ -0.88
FAM228B-209ENST00000615135 CRAMP1Q96RY5 1269 aa9.55□□□□□ -0.88
FAM228B-209ENST00000615135 RTFDC1Q9BY42 306 aaPredicted RBP9.55□□□□□ -0.88
FAM228B-209ENST00000615135 SCUBE2Q9NQ36 999 aa9.55□□□□□ -0.88
FAM228B-209ENST00000615135 CNOT7Q9UIV1 285 aaKnown RBP9.55□□□□□ -0.88
FAM228B-209ENST00000615135 ZNF330Q9Y3S2 320 aaPredicted RBP9.55□□□□□ -0.88
FAM228B-209ENST00000615135 RIC1Q4ADV7 1423 aa9.55□□□□□ -0.88
FAM228B-209ENST00000615135 IL13P35225 146 aa9.54□□□□□ -0.88
FAM228B-209ENST00000615135 TNNT2P45379 298 aaPredicted RBP9.54□□□□□ -0.88
FAM228B-209ENST00000615135 TM4SF4P48230 202 aa9.54□□□□□ -0.88
FAM228B-209ENST00000615135 TNIP1Q15025 636 aa9.54□□□□□ -0.88
FAM228B-209ENST00000615135 KRT26Q7Z3Y9 468 aa9.54□□□□□ -0.88
FAM228B-209ENST00000615135 RASAL3Q86YV0 1011 aa9.54□□□□□ -0.88
FAM228B-209ENST00000615135 DPF2Q92785 391 aa9.54□□□□□ -0.88
FAM228B-209ENST00000615135 NIP7Q9Y221 180 aaKnown RBP eCLIP9.54□□□□□ -0.88
FAM228B-209ENST00000615135 PITPNM2Q9BZ72 1349 aa9.54□□□□□ -0.88
FAM228B-209ENST00000615135 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
FAM228B-209ENST00000615135 H7C1D1 291 aa9.53□□□□□ -0.88
FAM228B-209ENST00000615135 TBC1D8O95759 1140 aa9.53□□□□□ -0.88
FAM228B-209ENST00000615135 RRP1P56182 461 aaKnown RBP9.53□□□□□ -0.88
FAM228B-209ENST00000615135 AOC3Q16853 763 aa9.53□□□□□ -0.88
FAM228B-209ENST00000615135 CCDC146Q8IYE0 955 aa9.53□□□□□ -0.88
FAM228B-209ENST00000615135 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
FAM228B-209ENST00000615135 PTCD2Q8WV60 388 aaKnown RBP9.53□□□□□ -0.88
FAM228B-209ENST00000615135 BCL2L13Q9BXK5 485 aa9.53□□□□□ -0.88
FAM228B-209ENST00000615135 RCAN3Q9UKA8 241 aa9.53□□□□□ -0.88
FAM228B-209ENST00000615135 SHTN1A0MZ66 631 aa9.52□□□□□ -0.89
FAM228B-209ENST00000615135 FECHP22830 423 aa9.52□□□□□ -0.89
FAM228B-209ENST00000615135 FKBP1BP68106 108 aa9.52□□□□□ -0.89
FAM228B-209ENST00000615135 SUPT20HQ8NEM7 779 aa9.52□□□□□ -0.89
FAM228B-209ENST00000615135 FMNL2Q96PY5 1086 aa9.52□□□□□ -0.89
FAM228B-209ENST00000615135 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.52□□□□□ -0.89
FAM228B-209ENST00000615135 PAPPA2Q9BXP8 1791 aa9.52□□□□□ -0.89
FAM228B-209ENST00000615135 PPEF1O14829 653 aaPredicted RBP9.51□□□□□ -0.89
FAM228B-209ENST00000615135 TBC1D12O60347 775 aa9.51□□□□□ -0.89
FAM228B-209ENST00000615135 FKTNO75072 461 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms