RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CCDC85AQ96PX6 553 aaPredicted RBP10.01□□□□□ -0.81
PCDH9-205ENST00000614931 RRAGCQ9HB90 399 aa10.01□□□□□ -0.81
PCDH9-205ENST00000614931 PTPN12Q05209 780 aaKnown RBP10□□□□□ -0.81
PCDH9-205ENST00000614931 RTKN2Q8IZC4 609 aa10□□□□□ -0.81
PCDH9-205ENST00000614931 RBM46Q8TBY0 533 aaKnown RBP10□□□□□ -0.81
PCDH9-205ENST00000614931 ZNF594Q96JF6 807 aaPredicted RBP10□□□□□ -0.81
PCDH9-205ENST00000614931 GREM2Q9H772 168 aa10□□□□□ -0.81
PCDH9-205ENST00000614931 DCTPP1Q9H773 170 aa10□□□□□ -0.81
PCDH9-205ENST00000614931 EXOC6BQ9Y2D4 811 aa10□□□□□ -0.81
PCDH9-205ENST00000614931 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10□□□□□ -0.81
PCDH9-205ENST00000614931 SNED1Q8TER0 1413 aa9.99□□□□□ -0.81
PCDH9-205ENST00000614931 LRRC37AA6NMS7 1700 aa9.99□□□□□ -0.81
PCDH9-205ENST00000614931 HMMRO75330 724 aa9.99□□□□□ -0.81
PCDH9-205ENST00000614931 FKBP4Q02790 459 aaKnown RBP eCLIP9.99□□□□□ -0.81
PCDH9-205ENST00000614931 OLFM4Q6UX06 510 aa9.99□□□□□ -0.81
PCDH9-205ENST00000614931 RPGRQ92834 1020 aaKnown RBP9.99□□□□□ -0.81
PCDH9-205ENST00000614931 CRAMP1Q96RY5 1269 aa9.99□□□□□ -0.81
PCDH9-205ENST00000614931 HDAC5Q9UQL6 1122 aa9.99□□□□□ -0.81
PCDH9-205ENST00000614931 CHMP3Q9Y3E7 222 aa9.99□□□□□ -0.81
PCDH9-205ENST00000614931 RTL9Q8NET4 1388 aa9.99□□□□□ -0.81
PCDH9-205ENST00000614931 ARAP2Q8WZ64 1704 aa9.99□□□□□ -0.81
PCDH9-205ENST00000614931 WDR90Q96KV7 1748 aa9.99□□□□□ -0.81
PCDH9-205ENST00000614931 SMARCA5O60264 1052 aaPredicted RBP9.98□□□□□ -0.81
PCDH9-205ENST00000614931 VEGFAP15692 232 aaPredicted RBP9.98□□□□□ -0.81
PCDH9-205ENST00000614931 PDE4AP27815 886 aa9.98□□□□□ -0.81
PCDH9-205ENST00000614931 FSTL1Q12841 308 aa9.98□□□□□ -0.81
PCDH9-205ENST00000614931 SF3B3Q15393 1217 aaKnown RBP9.98□□□□□ -0.81
PCDH9-205ENST00000614931 CC2D2BQ6DHV5 1058 aa9.98□□□□□ -0.81
PCDH9-205ENST00000614931 DPY19L2Q6NUT2 758 aa9.98□□□□□ -0.81
PCDH9-205ENST00000614931 SLC51AQ86UW1 340 aa9.98□□□□□ -0.81
PCDH9-205ENST00000614931 C16orf71Q8IYS4 520 aaPredicted RBP9.98□□□□□ -0.81
PCDH9-205ENST00000614931 NLRP3Q96P20 1036 aa9.98□□□□□ -0.81
PCDH9-205ENST00000614931 PUS3Q9BZE2 481 aaKnown RBP9.98□□□□□ -0.81
PCDH9-205ENST00000614931 SIL1Q9H173 461 aa9.98□□□□□ -0.81
PCDH9-205ENST00000614931 COPRSQ9NQ92 184 aa9.98□□□□□ -0.81
PCDH9-205ENST00000614931 SEC31BQ9NQW1 1179 aa9.98□□□□□ -0.81
PCDH9-205ENST00000614931 NOP58Q9Y2X3 529 aaKnown RBP9.98□□□□□ -0.81
PCDH9-205ENST00000614931 POTECB2RU33 542 aa9.97□□□□□ -0.81
PCDH9-205ENST00000614931 APBB1O00213 710 aa9.97□□□□□ -0.81
PCDH9-205ENST00000614931 SURF6O75683 361 aaKnown RBP9.97□□□□□ -0.81
PCDH9-205ENST00000614931 SASH1O94885 1247 aa9.97□□□□□ -0.81
PCDH9-205ENST00000614931 ITGA6P23229 1130 aa9.97□□□□□ -0.81
PCDH9-205ENST00000614931 NUCB1Q02818 461 aa9.97□□□□□ -0.81
PCDH9-205ENST00000614931 GRIPAP1Q4V328 841 aa9.97□□□□□ -0.81
PCDH9-205ENST00000614931 LRRC24Q50LG9 513 aa9.97□□□□□ -0.81
PCDH9-205ENST00000614931 ATG9AQ7Z3C6 839 aa9.97□□□□□ -0.81
PCDH9-205ENST00000614931 GCC1Q96CN9 775 aa9.97□□□□□ -0.81
PCDH9-205ENST00000614931 RBM17Q96I25 401 aaKnown RBP9.97□□□□□ -0.81
PCDH9-205ENST00000614931 PSMD1Q99460 953 aa9.97□□□□□ -0.81
PCDH9-205ENST00000614931 ZNF277Q9NRM2 450 aaPredicted RBP9.97□□□□□ -0.81
PCDH9-205ENST00000614931 IARSP41252 1262 aaKnown RBP9.96□□□□□ -0.82
PCDH9-205ENST00000614931 APLP1P51693 650 aa9.96□□□□□ -0.82
PCDH9-205ENST00000614931 LNPKQ9C0E8 428 aa9.96□□□□□ -0.82
PCDH9-205ENST00000614931 LTBP1Q14766 1721 aa9.96□□□□□ -0.82
PCDH9-205ENST00000614931 PPEF1O14829 653 aaPredicted RBP9.95□□□□□ -0.82
PCDH9-205ENST00000614931 DDNO94850 711 aaPredicted RBP9.95□□□□□ -0.82
PCDH9-205ENST00000614931 IFIT5Q13325 482 aaKnown RBP9.95□□□□□ -0.82
PCDH9-205ENST00000614931 CCDC152Q4G0S7 254 aa9.95□□□□□ -0.82
PCDH9-205ENST00000614931 ANKRD45Q5TZF3 282 aa9.95□□□□□ -0.82
PCDH9-205ENST00000614931 SMC1BQ8NDV3 1235 aa9.95□□□□□ -0.82
PCDH9-205ENST00000614931 OTUD7AQ8TE49 926 aaPredicted RBP9.95□□□□□ -0.82
PCDH9-205ENST00000614931 IL1RAPL2Q9NP60 686 aa9.95□□□□□ -0.82
PCDH9-205ENST00000614931 ATP6V0A2Q9Y487 856 aa9.95□□□□□ -0.82
PCDH9-205ENST00000614931 ZNF609O15014 1411 aa9.95□□□□□ -0.82
PCDH9-205ENST00000614931 AK9Q5TCS8 1911 aa9.95□□□□□ -0.82
PCDH9-205ENST00000614931 SALL3Q9BXA9 1300 aa9.94□□□□□ -0.82
PCDH9-205ENST00000614931 ANKRD18BA2A2Z9 1011 aa9.94□□□□□ -0.82
PCDH9-205ENST00000614931 FZD9O00144 591 aa9.94□□□□□ -0.82
PCDH9-205ENST00000614931 EYA2O00167 538 aa9.94□□□□□ -0.82
PCDH9-205ENST00000614931 BBOX1O75936 387 aa9.94□□□□□ -0.82
PCDH9-205ENST00000614931 CCDC57Q2TAC2 916 aa9.94□□□□□ -0.82
PCDH9-205ENST00000614931 CHD1LQ86WJ1 897 aa9.94□□□□□ -0.82
PCDH9-205ENST00000614931 RHPN1Q8TCX5 695 aa9.94□□□□□ -0.82
PCDH9-205ENST00000614931 CELF1Q92879 486 aaKnown RBP9.94□□□□□ -0.82
PCDH9-205ENST00000614931 L3MBTL3Q96JM7 780 aaPredicted RBP9.94□□□□□ -0.82
PCDH9-205ENST00000614931 COL4A5P29400 1685 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 ZNF541Q9H0D2 1346 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 RAB11FIP3O75154 756 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 HSP90B1P14625 803 aaKnown RBP9.93□□□□□ -0.82
PCDH9-205ENST00000614931 TFCP2Q12800 502 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 G3BP1Q13283 466 aaKnown RBP eCLIP9.93□□□□□ -0.82
PCDH9-205ENST00000614931 OS9Q13438 667 aaPredicted RBP9.93□□□□□ -0.82
PCDH9-205ENST00000614931 SP8Q8IXZ3 490 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 DNAJC5GQ8N7S2 189 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 LRRCC1Q9C099 1032 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 RIPOR2Q9Y4F9 1068 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 AKAP11Q9UKA4 1901 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 MYH13Q9UKX3 1938 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 SCN4AP35499 1836 aa9.93□□□□□ -0.82
PCDH9-205ENST00000614931 MYO5AQ9Y4I1 1855 aaKnown RBP9.92□□□□□ -0.82
PCDH9-205ENST00000614931 CIAO1O76071 339 aa9.92□□□□□ -0.82
PCDH9-205ENST00000614931 RGS3P49796 1198 aa9.92□□□□□ -0.82
PCDH9-205ENST00000614931 GRAPQ13588 217 aa9.92□□□□□ -0.82
PCDH9-205ENST00000614931 HSP90AB4PQ58FF6 505 aa9.92□□□□□ -0.82
PCDH9-205ENST00000614931 TAF7LQ5H9L4 462 aa9.92□□□□□ -0.82
PCDH9-205ENST00000614931 DDX46Q7L014 1031 aaKnown RBP9.92□□□□□ -0.82
PCDH9-205ENST00000614931 VGLL2Q8N8G2 317 aa9.92□□□□□ -0.82
PCDH9-205ENST00000614931 GRAPLQ8TC17 118 aaPredicted RBP9.92□□□□□ -0.82
PCDH9-205ENST00000614931 JDP2Q8WYK2 163 aa9.92□□□□□ -0.82
PCDH9-205ENST00000614931 KIF1BPQ96EK5 621 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms