RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 RNMTO43148 476 aaKnown RBP16.97■□□□□ 0.31
SNPH-203ENST00000614659 ZC3H12CQ9C0D7 883 aaKnown RBP16.97■□□□□ 0.31
SNPH-203ENST00000614659 GOLGA6L10A6NI86 522 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 ATP5J2-PTCD1G3V325 749 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 CHMLP26374 656 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 KIF5BP33176 963 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 RAB34Q9BZG1 259 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 CNNM2Q9H8M5 875 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 ZNF165P49910 485 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 PDCL3Q9H2J4 239 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 ORC3Q9UBD5 711 aaPredicted RBP16.97■□□□□ 0.31
SNPH-203ENST00000614659 UGGT1Q9NYU2 1555 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 GNPATO15228 680 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 KIF5CO60282 957 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 ATL3Q6DD88 541 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 TMCO3Q6UWJ1 677 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 COPS6Q7L5N1 327 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 FAM200AQ8TCP9 573 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 KRT23Q9C075 422 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 TANGO6Q9C0B7 1094 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 EIF5P55010 431 aaKnown RBP16.97■□□□□ 0.31
SNPH-203ENST00000614659 USP48Q86UV5 1035 aa16.97■□□□□ 0.31
SNPH-203ENST00000614659 RBM27Q9P2N5 1060 aaKnown RBP16.97■□□□□ 0.31
SNPH-203ENST00000614659 CHL1O00533 1208 aa16.96■□□□□ 0.31
SNPH-203ENST00000614659 METAP2P50579 478 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNPH-203ENST00000614659 TSHZ3Q63HK5 1081 aa16.96■□□□□ 0.31
SNPH-203ENST00000614659 MPNDQ8N594 471 aa16.96■□□□□ 0.31
SNPH-203ENST00000614659 ZCCHC11Q5TAX3 1644 aaKnown RBP16.96■□□□□ 0.31
SNPH-203ENST00000614659 CKAP2LQ8IYA6 745 aa16.96■□□□□ 0.31
SNPH-203ENST00000614659 FBLN1P23142 703 aa16.96■□□□□ 0.31
SNPH-203ENST00000614659 CASQ1P31415 396 aa16.96■□□□□ 0.31
SNPH-203ENST00000614659 FKBP15Q5T1M5 1219 aa16.96■□□□□ 0.31
SNPH-203ENST00000614659 EYA1Q99502 592 aa16.96■□□□□ 0.31
SNPH-203ENST00000614659 ORAI2Q96SN7 254 aa16.96■□□□□ 0.3
SNPH-203ENST00000614659 TSG101Q99816 390 aa16.96■□□□□ 0.3
SNPH-203ENST00000614659 CCDC87Q9NVE4 849 aa16.96■□□□□ 0.3
SNPH-203ENST00000614659 KIF20AO95235 890 aa16.95■□□□□ 0.3
SNPH-203ENST00000614659 TNNT1P13805 278 aa16.95■□□□□ 0.3
SNPH-203ENST00000614659 B4DLN1 442 aa16.95■□□□□ 0.3
SNPH-203ENST00000614659 TNNI2P48788 182 aa16.95■□□□□ 0.3
SNPH-203ENST00000614659 MRPL12P52815 198 aaKnown RBP16.95■□□□□ 0.3
SNPH-203ENST00000614659 TMEM67Q5HYA8 995 aa16.95■□□□□ 0.3
SNPH-203ENST00000614659 KIAA1328Q86T90 577 aa16.95■□□□□ 0.3
SNPH-203ENST00000614659 NFATC2IPQ8NCF5 419 aa16.95■□□□□ 0.3
SNPH-203ENST00000614659 MAP3K19Q56UN5 1328 aa16.95■□□□□ 0.3
SNPH-203ENST00000614659 DESP17661 470 aa16.95■□□□□ 0.3
SNPH-203ENST00000614659 CCT2P78371 535 aaKnown RBP16.94■□□□□ 0.3
SNPH-203ENST00000614659 CNBD1Q8NA66 436 aa16.94■□□□□ 0.3
SNPH-203ENST00000614659 TRMT2AQ8IZ69 625 aaKnown RBP16.94■□□□□ 0.3
SNPH-203ENST00000614659 GDPD2Q9HCC8 539 aa16.94■□□□□ 0.3
SNPH-203ENST00000614659 ZRANB1Q9UGI0 708 aa16.94■□□□□ 0.3
SNPH-203ENST00000614659 MAP9Q49MG5 647 aa16.94■□□□□ 0.3
SNPH-203ENST00000614659 CCDC102BQ68D86 513 aa16.94■□□□□ 0.3
SNPH-203ENST00000614659 MFSD6Q6ZSS7 791 aa16.94■□□□□ 0.3
SNPH-203ENST00000614659 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
SNPH-203ENST00000614659 HOOK2Q96ED9 719 aa16.93■□□□□ 0.3
SNPH-203ENST00000614659 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
SNPH-203ENST00000614659 PDE6BP35913 854 aa16.93■□□□□ 0.3
SNPH-203ENST00000614659 NMIQ13287 307 aaPredicted RBP16.93■□□□□ 0.3
SNPH-203ENST00000614659 ATP2B3Q16720 1220 aa16.93■□□□□ 0.3
SNPH-203ENST00000614659 TMEM266Q2M3C6 531 aa16.93■□□□□ 0.3
SNPH-203ENST00000614659 CNPY2Q9Y2B0 182 aa16.93■□□□□ 0.3
SNPH-203ENST00000614659 SPA17Q15506 151 aa16.93■□□□□ 0.3
SNPH-203ENST00000614659 ERVK-7P63135 1459 aa16.93■□□□□ 0.3
SNPH-203ENST00000614659 BRF1Q92994 677 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 SLC39A6Q13433 755 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 FAM98CQ17RN3 349 aaKnown RBP16.92■□□□□ 0.3
SNPH-203ENST00000614659 WDR78Q5VTH9 848 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 RUFY3Q7L099 469 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 TFIP11Q9UBB9 837 aaKnown RBP16.92■□□□□ 0.3
SNPH-203ENST00000614659 FAM135BQ49AJ0 1406 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 GUCY1B3Q02153 619 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 ERICH4A6NGS2 130 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 YEATS4O95619 227 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 FAM114A1Q8IWE2 563 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 MRPS27Q92552 414 aaKnown RBP16.92■□□□□ 0.3
SNPH-203ENST00000614659 ZKSCAN5Q9Y2L8 839 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 ABCC4O15439 1325 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 SEC24BO95487 1268 aa16.92■□□□□ 0.3
SNPH-203ENST00000614659 GOLGA6L7A0A1B0GV03 622 aa16.91■□□□□ 0.3
SNPH-203ENST00000614659 PPP1R12BO60237 982 aaPredicted RBP16.91■□□□□ 0.3
SNPH-203ENST00000614659 AMPD3Q01432 767 aa16.91■□□□□ 0.3
SNPH-203ENST00000614659 TAF4BQ92750 862 aa16.91■□□□□ 0.3
SNPH-203ENST00000614659 SSH2Q76I76 1423 aa16.91■□□□□ 0.3
SNPH-203ENST00000614659 CCDC194A0A1B0GVG4 234 aa16.91■□□□□ 0.3
SNPH-203ENST00000614659 CREB3L3Q68CJ9 461 aa16.91■□□□□ 0.3
SNPH-203ENST00000614659 LRRC27Q9C0I9 530 aa16.91■□□□□ 0.3
SNPH-203ENST00000614659 RMND1Q9NWS8 449 aa16.91■□□□□ 0.3
SNPH-203ENST00000614659 SKIDA1Q1XH10 827 aa16.91■□□□□ 0.3
SNPH-203ENST00000614659 FAM177A1Q8N128 213 aaPredicted RBP16.91■□□□□ 0.3
SNPH-203ENST00000614659 ATP7BP35670 1465 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 APBA3O96018 575 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 AK2P54819 239 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 NLRP5P59047 1200 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 CERS3Q8IU89 383 aa16.9■□□□□ 0.3
SNPH-203ENST00000614659 HELLSQ9NRZ9 838 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms