RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 MPNDQ8N594 471 aa13.27□□□□□ -0.28
ATF3-211ENST00000613954 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.28
ATF3-211ENST00000613954 PSMA5P28066 241 aa13.27□□□□□ -0.29
ATF3-211ENST00000613954 FAM98CQ17RN3 349 aaKnown RBP13.27□□□□□ -0.29
ATF3-211ENST00000613954 KAZALD1Q96I82 304 aa13.27□□□□□ -0.29
ATF3-211ENST00000613954 NUP62CLQ9H1M0 184 aa13.27□□□□□ -0.29
ATF3-211ENST00000613954 BICC1Q9H694 974 aaKnown RBP13.27□□□□□ -0.29
ATF3-211ENST00000613954 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.29
ATF3-211ENST00000613954 COL15A1P39059 1388 aa13.26□□□□□ -0.29
ATF3-211ENST00000613954 LARGE1O95461 756 aa13.26□□□□□ -0.29
ATF3-211ENST00000613954 OS9Q13438 667 aaPredicted RBP13.26□□□□□ -0.29
ATF3-211ENST00000613954 ANKRD1Q15327 319 aa13.26□□□□□ -0.29
ATF3-211ENST00000613954 C17orf53Q8N3J3 647 aaPredicted RBP13.26□□□□□ -0.29
ATF3-211ENST00000613954 EVI5LQ96CN4 794 aa13.26□□□□□ -0.29
ATF3-211ENST00000613954 SLC4A9Q96Q91 983 aa13.26□□□□□ -0.29
ATF3-211ENST00000613954 ARID3AQ99856 593 aa13.26□□□□□ -0.29
ATF3-211ENST00000613954 GTPBP4Q9BZE4 634 aaKnown RBP13.26□□□□□ -0.29
ATF3-211ENST00000613954 KCNF1Q9H3M0 494 aa13.26□□□□□ -0.29
ATF3-211ENST00000613954 ECHDC1Q9NTX5 307 aa13.26□□□□□ -0.29
ATF3-211ENST00000613954 USP21Q9UK80 565 aa13.26□□□□□ -0.29
ATF3-211ENST00000613954 VPS37CA5D8V6 355 aaPredicted RBP13.25□□□□□ -0.29
ATF3-211ENST00000613954 ATP5J2-PTCD1G3V325 749 aa13.25□□□□□ -0.29
ATF3-211ENST00000613954 CYP19A1P11511 503 aaPredicted RBP13.25□□□□□ -0.29
ATF3-211ENST00000613954 HSPA1LP34931 641 aa13.25□□□□□ -0.29
ATF3-211ENST00000613954 LARP1BQ659C4 914 aaKnown RBP13.25□□□□□ -0.29
ATF3-211ENST00000613954 PRPF40BQ6NWY9 871 aaKnown RBP13.25□□□□□ -0.29
ATF3-211ENST00000613954 PDCL2Q8N4E4 241 aa13.25□□□□□ -0.29
ATF3-211ENST00000613954 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
ATF3-211ENST00000613954 CTIFO43310 598 aaKnown RBP13.25□□□□□ -0.29
ATF3-211ENST00000613954 NECTIN1Q15223 517 aa13.25□□□□□ -0.29
ATF3-211ENST00000613954 SYCP1Q15431 976 aa13.25□□□□□ -0.29
ATF3-211ENST00000613954 PPP4R3BQ5MIZ7 849 aa13.25□□□□□ -0.29
ATF3-211ENST00000613954 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.25□□□□□ -0.29
ATF3-211ENST00000613954 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
ATF3-211ENST00000613954 ZBTB3Q9H5J0 574 aa13.25□□□□□ -0.29
ATF3-211ENST00000613954 DDX19AQ9NUU7 478 aaKnown RBP13.25□□□□□ -0.29
ATF3-211ENST00000613954 TJP1Q07157 1748 aa13.24□□□□□ -0.29
ATF3-211ENST00000613954 A0A087WZG4 1122 aa13.24□□□□□ -0.29
ATF3-211ENST00000613954 AP5Z1O43299 807 aa13.24□□□□□ -0.29
ATF3-211ENST00000613954 CAVIN2O95810 425 aa13.24□□□□□ -0.29
ATF3-211ENST00000613954 TPRNQ4KMQ1 711 aa13.24□□□□□ -0.29
ATF3-211ENST00000613954 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
ATF3-211ENST00000613954 KIF6Q6ZMV9 814 aa13.24□□□□□ -0.29
ATF3-211ENST00000613954 ANKRD7Q92527 254 aa13.24□□□□□ -0.29
ATF3-211ENST00000613954 ALDH8A1Q9H2A2 487 aaPredicted RBP13.24□□□□□ -0.29
ATF3-211ENST00000613954 CWC25Q9NXE8 425 aaPredicted RBP13.24□□□□□ -0.29
ATF3-211ENST00000613954 PYCARDQ9ULZ3 195 aa13.24□□□□□ -0.29
ATF3-211ENST00000613954 A0A0G2JS52 829 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 GOLGA6L4A6NEF3 574 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 RIOK3O14730 519 aaKnown RBP13.23□□□□□ -0.29
ATF3-211ENST00000613954 ZSCAN20P17040 1043 aaPredicted RBP13.23□□□□□ -0.29
ATF3-211ENST00000613954 TYRO3Q06418 890 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 ME3Q16798 604 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 RNF20Q5VTR2 975 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 UBE3BQ7Z3V4 1068 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 CCDC191Q8NCU4 936 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 LARP6Q9BRS8 491 aaKnown RBP13.23□□□□□ -0.29
ATF3-211ENST00000613954 H7C1W4 665 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 IFIT2P09913 472 aaKnown RBP13.23□□□□□ -0.29
ATF3-211ENST00000613954 CPA1P15085 419 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 CASP7P55210 303 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 PTH1RQ03431 593 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 ADCK5Q3MIX3 580 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 TTC6Q86TZ1 520 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 SPC24Q8NBT2 197 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 TNMDQ9H2S6 317 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 ZNF330Q9Y3S2 320 aaPredicted RBP13.23□□□□□ -0.29
ATF3-211ENST00000613954 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 KAT6BQ8WYB5 2073 aa13.23□□□□□ -0.29
ATF3-211ENST00000613954 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
ATF3-211ENST00000613954 TSC1Q92574 1164 aa13.22□□□□□ -0.29
ATF3-211ENST00000613954 SMARCC1Q92922 1105 aaPredicted RBP13.22□□□□□ -0.29
ATF3-211ENST00000613954 FEZ1Q99689 392 aa13.22□□□□□ -0.29
ATF3-211ENST00000613954 SNRKQ9NRH2 765 aa13.22□□□□□ -0.29
ATF3-211ENST00000613954 THSD7AQ9UPZ6 1657 aa13.22□□□□□ -0.29
ATF3-211ENST00000613954 KCNJ4P48050 445 aa13.22□□□□□ -0.29
ATF3-211ENST00000613954 RABL6Q3YEC7 729 aaPredicted RBP13.22□□□□□ -0.29
ATF3-211ENST00000613954 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
ATF3-211ENST00000613954 CREB3L3Q68CJ9 461 aa13.22□□□□□ -0.29
ATF3-211ENST00000613954 RBM43Q6ZSC3 357 aaKnown RBP13.22□□□□□ -0.29
ATF3-211ENST00000613954 MAP4K1Q92918 833 aa13.22□□□□□ -0.29
ATF3-211ENST00000613954 ISCA1Q9BUE6 129 aa13.22□□□□□ -0.29
ATF3-211ENST00000613954 RBM8AQ9Y5S9 174 aaKnown RBP13.22□□□□□ -0.29
ATF3-211ENST00000613954 CICQ96RK0 1608 aaPredicted RBP13.22□□□□□ -0.29
ATF3-211ENST00000613954 MAP3K15Q6ZN16 1313 aa13.21□□□□□ -0.29
ATF3-211ENST00000613954 KIF20AO95235 890 aa13.21□□□□□ -0.29
ATF3-211ENST00000613954 ST3GAL1Q11201 340 aa13.21□□□□□ -0.29
ATF3-211ENST00000613954 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
ATF3-211ENST00000613954 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.29
ATF3-211ENST00000613954 TPCN1Q9ULQ1 816 aa13.21□□□□□ -0.29
ATF3-211ENST00000613954 PA2G4Q9UQ80 394 aaKnown RBP13.21□□□□□ -0.29
ATF3-211ENST00000613954 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
ATF3-211ENST00000613954 LOC102724428A0A0B4J2F2 783 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 SMTNL1A8MU46 457 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 IL6STP40189 918 aaPredicted RBP13.2□□□□□ -0.3
ATF3-211ENST00000613954 SIK1P57059 783 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 CBX1P83916 185 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
ATF3-211ENST00000613954 SPATA32Q96LK8 384 aa13.2□□□□□ -0.3
ATF3-211ENST00000613954 PRDM10Q9NQV6 1147 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms