RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 FAM177BA6PVY3 158 aa14.26□□□□□ -0.13
SLIRP-212ENST00000613856 H7C1W4 665 aa14.26□□□□□ -0.13
SLIRP-212ENST00000613856 IGHDP01880 384 aa14.26□□□□□ -0.13
SLIRP-212ENST00000613856 ST5P78524 1137 aa14.26□□□□□ -0.13
SLIRP-212ENST00000613856 FKBP4Q02790 459 aaKnown RBP eCLIP14.26□□□□□ -0.13
SLIRP-212ENST00000613856 GRM1Q13255 1194 aa14.26□□□□□ -0.13
SLIRP-212ENST00000613856 MTX1Q13505 466 aa14.26□□□□□ -0.13
SLIRP-212ENST00000613856 PARP10Q53GL7 1025 aa14.26□□□□□ -0.13
SLIRP-212ENST00000613856 NLRP10Q86W26 655 aa14.26□□□□□ -0.13
SLIRP-212ENST00000613856 SIRT2Q8IXJ6 389 aa14.26□□□□□ -0.13
SLIRP-212ENST00000613856 PIAS4Q8N2W9 510 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-212ENST00000613856 ABT1Q9ULW3 272 aaKnown RBP14.26□□□□□ -0.13
SLIRP-212ENST00000613856 PDZRN3Q9UPQ7 1066 aa14.26□□□□□ -0.13
SLIRP-212ENST00000613856 DDX60Q8IY21 1712 aaKnown RBP14.26□□□□□ -0.13
SLIRP-212ENST00000613856 TNRC18O15417 2968 aaPredicted RBP14.25□□□□□ -0.13
SLIRP-212ENST00000613856 UBN2Q6ZU65 1347 aa14.25□□□□□ -0.13
SLIRP-212ENST00000613856 CDHR2Q9BYE9 1310 aa14.25□□□□□ -0.13
SLIRP-212ENST00000613856 CCDC85CA6NKD9 419 aa14.25□□□□□ -0.13
SLIRP-212ENST00000613856 TRAF5O00463 557 aa14.25□□□□□ -0.13
SLIRP-212ENST00000613856 HMMRO75330 724 aa14.25□□□□□ -0.13
SLIRP-212ENST00000613856 PCCAP05165 728 aaPredicted RBP14.25□□□□□ -0.13
SLIRP-212ENST00000613856 FZD9O00144 591 aa14.24□□□□□ -0.13
SLIRP-212ENST00000613856 ATP8B2P98198 1209 aa14.24□□□□□ -0.13
SLIRP-212ENST00000613856 CYP4F22Q6NT55 531 aa14.24□□□□□ -0.13
SLIRP-212ENST00000613856 UBE3BQ7Z3V4 1068 aa14.24□□□□□ -0.13
SLIRP-212ENST00000613856 NBPF5PQ86XG9 351 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-212ENST00000613856 SMC5Q8IY18 1101 aa14.24□□□□□ -0.13
SLIRP-212ENST00000613856 ZBTB38Q8NAP3 1195 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-212ENST00000613856 KAZALD1Q96I82 304 aa14.24□□□□□ -0.13
SLIRP-212ENST00000613856 SUCLG2Q96I99 432 aa14.24□□□□□ -0.13
SLIRP-212ENST00000613856 NPR1P16066 1061 aa14.23□□□□□ -0.13
SLIRP-212ENST00000613856 GPTP24298 496 aa14.23□□□□□ -0.13
SLIRP-212ENST00000613856 IARSP41252 1262 aaKnown RBP14.23□□□□□ -0.13
SLIRP-212ENST00000613856 RABL6Q3YEC7 729 aaPredicted RBP14.23□□□□□ -0.13
SLIRP-212ENST00000613856 SOGA3Q5TF21 947 aa14.23□□□□□ -0.13
SLIRP-212ENST00000613856 SYNE4Q8N205 404 aa14.23□□□□□ -0.13
SLIRP-212ENST00000613856 SSH3Q8TE77 659 aa14.23□□□□□ -0.13
SLIRP-212ENST00000613856 CAPNS2Q96L46 248 aa14.23□□□□□ -0.13
SLIRP-212ENST00000613856 PLA2G12BQ9BX93 195 aa14.23□□□□□ -0.13
SLIRP-212ENST00000613856 ABCC12Q96J65 1359 aa14.22□□□□□ -0.13
SLIRP-212ENST00000613856 KLRG2A4D1S0 409 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-212ENST00000613856 AOC2O75106 756 aa14.22□□□□□ -0.13
SLIRP-212ENST00000613856 MAP2K1Q02750 393 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-212ENST00000613856 MLLT1Q03111 559 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-212ENST00000613856 POLA2Q14181 598 aa14.22□□□□□ -0.13
SLIRP-212ENST00000613856 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-212ENST00000613856 GCC1Q96CN9 775 aa14.22□□□□□ -0.13
SLIRP-212ENST00000613856 BICC1Q9H694 974 aaKnown RBP14.22□□□□□ -0.13
SLIRP-212ENST00000613856 NIP7Q9Y221 180 aaKnown RBP eCLIP14.22□□□□□ -0.13
SLIRP-212ENST00000613856 EPS15P42566 896 aa14.21□□□□□ -0.13
SLIRP-212ENST00000613856 SCNN1DP51172 638 aa14.21□□□□□ -0.13
SLIRP-212ENST00000613856 CST9Q5W186 159 aa14.21□□□□□ -0.13
SLIRP-212ENST00000613856 PPP1R42Q7Z4L9 355 aa14.21□□□□□ -0.13
SLIRP-212ENST00000613856 DCTPP1Q9H773 170 aa14.21□□□□□ -0.13
SLIRP-212ENST00000613856 GJA3Q9Y6H8 435 aa14.21□□□□□ -0.13
SLIRP-212ENST00000613856 PNMA6EA0A0J9YXQ4 647 aa14.2□□□□□ -0.14
SLIRP-212ENST00000613856 NTSR2O95665 410 aa14.2□□□□□ -0.14
SLIRP-212ENST00000613856 RGS19P49795 217 aa14.2□□□□□ -0.14
SLIRP-212ENST00000613856 SUSD4Q5VX71 490 aa14.2□□□□□ -0.14
SLIRP-212ENST00000613856 PNMA8AQ86V59 439 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-212ENST00000613856 GPC2Q8N158 579 aa14.2□□□□□ -0.14
SLIRP-212ENST00000613856 UTP14AQ9BVJ6 771 aaKnown RBP14.2□□□□□ -0.14
SLIRP-212ENST00000613856 SH3TC1Q8TE82 1336 aa14.19□□□□□ -0.14
SLIRP-212ENST00000613856 RIC1Q4ADV7 1423 aa14.19□□□□□ -0.14
SLIRP-212ENST00000613856 SRGAP3O43295 1099 aa14.19□□□□□ -0.14
SLIRP-212ENST00000613856 HSP90B1P14625 803 aaKnown RBP14.19□□□□□ -0.14
SLIRP-212ENST00000613856 FOXO4P98177 505 aa14.19□□□□□ -0.14
SLIRP-212ENST00000613856 EPHA10Q5JZY3 1008 aa14.19□□□□□ -0.14
SLIRP-212ENST00000613856 GPR101Q96P66 508 aaPredicted RBP14.19□□□□□ -0.14
SLIRP-212ENST00000613856 TRMT112Q9UI30 125 aaKnown RBP14.19□□□□□ -0.14
SLIRP-212ENST00000613856 NUTM1Q86Y26 1132 aa14.18□□□□□ -0.14
SLIRP-212ENST00000613856 FAM89AQ96GI7 184 aa14.18□□□□□ -0.14
SLIRP-212ENST00000613856 NYXQ9GZU5 481 aa14.18□□□□□ -0.14
SLIRP-212ENST00000613856 IRS4O14654 1257 aaPredicted RBP14.17□□□□□ -0.14
SLIRP-212ENST00000613856 PDE8AO60658 829 aa14.17□□□□□ -0.14
SLIRP-212ENST00000613856 RTKN2Q8IZC4 609 aa14.17□□□□□ -0.14
SLIRP-212ENST00000613856 JARID2Q92833 1246 aaPredicted RBP14.17□□□□□ -0.14
SLIRP-212ENST00000613856 MCOLN1Q9GZU1 580 aa14.17□□□□□ -0.14
SLIRP-212ENST00000613856 NOP58Q9Y2X3 529 aaKnown RBP14.17□□□□□ -0.14
SLIRP-212ENST00000613856 CSF1RP07333 972 aa14.16□□□□□ -0.14
SLIRP-212ENST00000613856 NUCB1Q02818 461 aa14.16□□□□□ -0.14
SLIRP-212ENST00000613856 RTL5Q5HYW3 569 aaPredicted RBP14.16□□□□□ -0.14
SLIRP-212ENST00000613856 ZIC5Q96T25 663 aa14.16□□□□□ -0.14
SLIRP-212ENST00000613856 RTL9Q8NET4 1388 aa14.16□□□□□ -0.14
SLIRP-212ENST00000613856 RFX5P48382 616 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-212ENST00000613856 CTSWP56202 376 aa14.15□□□□□ -0.14
SLIRP-212ENST00000613856 HSP90AB4PQ58FF6 505 aa14.15□□□□□ -0.14
SLIRP-212ENST00000613856 LMBR1LQ6UX01 489 aa14.15□□□□□ -0.14
SLIRP-212ENST00000613856 DLK2Q6UY11 383 aa14.15□□□□□ -0.14
SLIRP-212ENST00000613856 TPTE2Q6XPS3 522 aa14.15□□□□□ -0.14
SLIRP-212ENST00000613856 C3orf67Q6ZVT6 689 aa14.15□□□□□ -0.14
SLIRP-212ENST00000613856 COPRSQ9NQ92 184 aa14.15□□□□□ -0.14
SLIRP-212ENST00000613856 TLL2Q9Y6L7 1015 aa14.15□□□□□ -0.14
SLIRP-212ENST00000613856 RAB11FIP3O75154 756 aa14.14□□□□□ -0.15
SLIRP-212ENST00000613856 CRY2Q49AN0 593 aa14.14□□□□□ -0.15
SLIRP-212ENST00000613856 SLC10A5Q5PT55 438 aa14.14□□□□□ -0.15
SLIRP-212ENST00000613856 JDP2Q8WYK2 163 aa14.14□□□□□ -0.15
SLIRP-212ENST00000613856 PSMD1Q99460 953 aa14.14□□□□□ -0.15
SLIRP-212ENST00000613856 TAF1P21675 1872 aa14.13□□□□□ -0.15
SLIRP-212ENST00000613856 ECE1P42892 770 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms