RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SART3Q15020 963 aaKnown RBP12.75□□□□□ -0.37
FAM3A-221ENST00000612856 SUCLG2Q96I99 432 aa12.75□□□□□ -0.37
FAM3A-221ENST00000612856 CCT2P78371 535 aaKnown RBP12.75□□□□□ -0.37
FAM3A-221ENST00000612856 BLOC1S2Q6QNY1 142 aa12.75□□□□□ -0.37
FAM3A-221ENST00000612856 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
FAM3A-221ENST00000612856 STX8Q9UNK0 236 aa12.75□□□□□ -0.37
FAM3A-221ENST00000612856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.75□□□□□ -0.37
FAM3A-221ENST00000612856 CDC42BPGQ6DT37 1551 aa12.75□□□□□ -0.37
FAM3A-221ENST00000612856 IGSF1Q8N6C5 1336 aa12.74□□□□□ -0.37
FAM3A-221ENST00000612856 FIBPO43427 364 aa12.74□□□□□ -0.37
FAM3A-221ENST00000612856 SLC9C2Q5TAH2 1124 aa12.74□□□□□ -0.37
FAM3A-221ENST00000612856 CERS3Q8IU89 383 aa12.74□□□□□ -0.37
FAM3A-221ENST00000612856 MED14O60244 1454 aa12.74□□□□□ -0.37
FAM3A-221ENST00000612856 ABCC4O15439 1325 aa12.74□□□□□ -0.37
FAM3A-221ENST00000612856 DEFB132Q7Z7B7 95 aa12.74□□□□□ -0.37
FAM3A-221ENST00000612856 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
FAM3A-221ENST00000612856 HTATSF1O43719 755 aaKnown RBP12.74□□□□□ -0.37
FAM3A-221ENST00000612856 CD2BP2O95400 341 aaKnown RBP12.74□□□□□ -0.37
FAM3A-221ENST00000612856 NOLC1Q14978 699 aaKnown RBP eCLIP12.74□□□□□ -0.37
FAM3A-221ENST00000612856 UFL1O94874 794 aa12.73□□□□□ -0.37
FAM3A-221ENST00000612856 LETM1O95202 739 aaPredicted RBP12.73□□□□□ -0.37
FAM3A-221ENST00000612856 DBNDD2Q9BQY9 259 aa12.73□□□□□ -0.37
FAM3A-221ENST00000612856 CYP7A1P22680 504 aa12.73□□□□□ -0.37
FAM3A-221ENST00000612856 GPR162Q16538 588 aa12.73□□□□□ -0.37
FAM3A-221ENST00000612856 CDCA7Q9BWT1 371 aaPredicted RBP12.73□□□□□ -0.37
FAM3A-221ENST00000612856 PKP1Q13835 747 aa12.73□□□□□ -0.37
FAM3A-221ENST00000612856 PLEKHM2Q8IWE5 1019 aa12.73□□□□□ -0.37
FAM3A-221ENST00000612856 CYP46A1Q9Y6A2 500 aa12.73□□□□□ -0.37
FAM3A-221ENST00000612856 GTPBP4Q9BZE4 634 aaKnown RBP12.72□□□□□ -0.37
FAM3A-221ENST00000612856 OVOS2A0A0J9YW53 1432 aa12.72□□□□□ -0.37
FAM3A-221ENST00000612856 OVOS2Q6IE36 1432 aa12.72□□□□□ -0.37
FAM3A-221ENST00000612856 SDSP20132 328 aa12.72□□□□□ -0.37
FAM3A-221ENST00000612856 ZNF772Q68DY9 489 aaPredicted RBP12.72□□□□□ -0.37
FAM3A-221ENST00000612856 TECPR2O15040 1411 aa12.72□□□□□ -0.37
FAM3A-221ENST00000612856 ZGPATQ8N5A5 531 aaKnown RBP12.71□□□□□ -0.37
FAM3A-221ENST00000612856 PLBD2Q8NHP8 589 aa12.71□□□□□ -0.37
FAM3A-221ENST00000612856 JDP2Q8WYK2 163 aa12.71□□□□□ -0.37
FAM3A-221ENST00000612856 DCTPP1Q9H773 170 aa12.71□□□□□ -0.37
FAM3A-221ENST00000612856 DOK7Q18PE1 504 aa12.71□□□□□ -0.37
FAM3A-221ENST00000612856 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.37
FAM3A-221ENST00000612856 METTL22Q9BUU2 404 aaPredicted RBP12.71□□□□□ -0.37
FAM3A-221ENST00000612856 GCKRQ14397 625 aa12.71□□□□□ -0.38
FAM3A-221ENST00000612856 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.71□□□□□ -0.38
FAM3A-221ENST00000612856 CCDC66A2RUB6 948 aa12.71□□□□□ -0.38
FAM3A-221ENST00000612856 KIF20AO95235 890 aa12.71□□□□□ -0.38
FAM3A-221ENST00000612856 SLC3A2P08195 630 aaKnown RBP12.71□□□□□ -0.38
FAM3A-221ENST00000612856 GSPT1P15170 499 aaKnown RBP12.71□□□□□ -0.38
FAM3A-221ENST00000612856 ATP8B2P98198 1209 aa12.71□□□□□ -0.38
FAM3A-221ENST00000612856 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.38
FAM3A-221ENST00000612856 OGFOD1Q8N543 542 aa12.71□□□□□ -0.38
FAM3A-221ENST00000612856 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.38
FAM3A-221ENST00000612856 CCDC69A6NI79 296 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 RAB11FIP3O75154 756 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 CCDC129Q6ZRS4 1044 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 CCDC83Q8IWF9 413 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 NRXN3Q9Y4C0 1643 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 CPA1P15085 419 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 PSMA5P28066 241 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 TERF1P54274 439 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 SAFBQ15424 915 aaKnown RBP eCLIP12.7□□□□□ -0.38
FAM3A-221ENST00000612856 FEZ1Q99689 392 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 SEC31BQ9NQW1 1179 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 A0A1B0GUL7 405 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 GOLGA6L6A8MZA4 724 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 ZNF500O60304 480 aaPredicted RBP12.7□□□□□ -0.38
FAM3A-221ENST00000612856 PRDM1O75626 825 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 PDE1AP54750 535 aa12.7□□□□□ -0.38
FAM3A-221ENST00000612856 C16orf45Q96MC5 204 aaPredicted RBP12.7□□□□□ -0.38
FAM3A-221ENST00000612856 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 ADCY5O95622 1261 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 HOMER1Q86YM7 354 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 PUS3Q9BZE2 481 aaKnown RBP12.69□□□□□ -0.38
FAM3A-221ENST00000612856 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.69□□□□□ -0.38
FAM3A-221ENST00000612856 V9GYY5 206 aaPredicted RBP12.69□□□□□ -0.38
FAM3A-221ENST00000612856 ALDH1L1O75891 902 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
FAM3A-221ENST00000612856 TCP10Q12799 353 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 TTC22Q5TAA0 569 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 LRSAM1Q6UWE0 723 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 UBR1Q8IWV7 1749 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
FAM3A-221ENST00000612856 MYRIPQ8NFW9 859 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 CCDC43Q96MW1 224 aaKnown RBP12.69□□□□□ -0.38
FAM3A-221ENST00000612856 USP44Q9H0E7 712 aa12.69□□□□□ -0.38
FAM3A-221ENST00000612856 USP32Q8NFA0 1604 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 MBD3O95983 291 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 RXRAP19793 462 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 CCDC96Q2M329 555 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 ZSCAN25Q6NSZ9 544 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 DIP2AQ14689 1571 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 ZNF213O14771 459 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 GYG1P46976 350 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
FAM3A-221ENST00000612856 HLFQ16534 295 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 LRRC24Q50LG9 513 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 BCL2L12Q9HB09 334 aa12.68□□□□□ -0.38
FAM3A-221ENST00000612856 RTL1A6NKG5 1358 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms