RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, human

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3B-204	ENST00000612688	ITGB4	P16144	1822 aa		13.99	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	NPHP1	O15259	732 aa		13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688		V9GYY5	206 aa	Predicted RBP	13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	VPS37C	A5D8V6	355 aa	Predicted RBP	13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	KIF20A	O95235	890 aa		13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	AK2	P54819	239 aa		13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	HMGN5	P82970	282 aa	Known RBP	13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	NRAP	Q86VF7	1730 aa		13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	CAMK4	Q16566	473 aa		13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	RHPN1	Q8TCX5	695 aa		13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	PIBF1	Q8WXW3	757 aa		13.98	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	CAST	P20810	708 aa	Known RBP	13.97	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	BICDL1	Q6ZP65	573 aa		13.97	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	PYCARD	Q9ULZ3	195 aa		13.97	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.97	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	ADCK5	Q3MIX3	580 aa		13.97	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	PXDNL	A1KZ92	1463 aa		13.97	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	FOSB	P53539	338 aa		13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	ZBTB9	Q96C00	473 aa		13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	ZNF594	Q96JF6	807 aa	Predicted RBP	13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	C16orf45	Q96MC5	204 aa	Predicted RBP	13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	TAOK2	Q9UL54	1235 aa		13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	DNM1	Q05193	864 aa	Known RBP	13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	TCIRG1	Q13488	830 aa		13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	POLA2	Q14181	598 aa		13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	PRIMPOL	Q96LW4	560 aa		13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	CCDC87	Q9NVE4	849 aa		13.96	□□□□□ -0.17
PPP4R3B-204	ENST00000612688	DOT1L	Q8TEK3	1739 aa		13.96	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	PRPF40B	Q6NWY9	871 aa	Known RBP	13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	SNX14	Q9Y5W7	946 aa		13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	PHF14	O94880	888 aa		13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	MBD3	O95983	291 aa		13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	PTH1R	Q03431	593 aa		13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	STK3	Q13188	491 aa		13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	INTS5	Q6P9B9	1019 aa	Known RBP	13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	NDUFB9	Q9Y6M9	179 aa		13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	SYT1	P21579	422 aa		13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	RUFY3	Q7L099	469 aa		13.95	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	MAP3K15	Q6ZN16	1313 aa		13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	LINC00116	Q8NCU8	138 aa		13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	OSBPL3	Q9H4L5	887 aa		13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	TRMT112	Q9UI30	125 aa	Known RBP	13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	SALL3	Q9BXA9	1300 aa		13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	TRIM37	O94972	964 aa		13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	CUL4A	Q13619	759 aa		13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	AACS	Q86V21	672 aa		13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	KIF1BP	Q96EK5	621 aa		13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	JAKMIP1	Q96N16	626 aa	Known RBP	13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	GLI3	P10071	1580 aa		13.94	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.93	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	CCDC24	Q8N4L8	307 aa		13.93	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	CCNL1	Q9UK58	526 aa	Predicted RBP	13.93	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	SMC3	Q9UQE7	1217 aa		13.93	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	HDAC5	Q9UQL6	1122 aa		13.93	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	CHGB	P05060	677 aa		13.93	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	DRC7	Q8IY82	874 aa		13.93	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	SMARCC1	Q92922	1105 aa	Predicted RBP	13.93	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	AP5Z1	O43299	807 aa		13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	CLASRP	Q8N2M8	674 aa	Known RBP	13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	CCDC191	Q8NCU4	936 aa		13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	NWD2	Q9ULI1	1742 aa		13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	TCHH	Q07283	1943 aa		13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	GJB2	P29033	226 aa		13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	TFIP11	Q9UBB9	837 aa	Known RBP	13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	TAF6L	Q9Y6J9	622 aa		13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688		H7C1W4	665 aa		13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	GNPAT	O15228	680 aa		13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	STX6	O43752	255 aa		13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	IFIT2	P09913	472 aa	Known RBP	13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	IL6ST	P40189	918 aa	Predicted RBP	13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	CKAP2L	Q8IYA6	745 aa		13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	SYAP1	Q96A49	352 aa	Predicted RBP	13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	TLR7	Q9NYK1	1049 aa	Known RBP	13.92	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	SASH1	O94885	1247 aa		13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	HSPA4	P34932	840 aa		13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	EDC3	Q96F86	508 aa	Known RBP	13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	WDR33	Q9C0J8	1336 aa	Known RBP	13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	EIF5	P55010	431 aa	Known RBP	13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	CASP7	P55210	303 aa		13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	TAF7L	Q5H9L4	462 aa		13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	NLRP10	Q86W26	655 aa		13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	PI4K2B	Q8TCG2	481 aa		13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	FBXW7	Q969H0	707 aa		13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	ZFP91	Q96JP5	570 aa	Predicted RBP	13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	ST7	Q9NRC1	585 aa		13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	DIAPH3	Q9NSV4	1193 aa		13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	UTY	O14607	1347 aa		13.91	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	PTPN12	Q05209	780 aa	Known RBP	13.9	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	FAM227B	Q96M60	508 aa		13.9	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	ISCA1	Q9BUE6	129 aa		13.9	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	PUS3	Q9BZE2	481 aa	Known RBP	13.9	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	SRP68	Q9UHB9	627 aa	Known RBP	13.9	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
PPP4R3B-204	ENST00000612688	UBR2	Q8IWV8	1755 aa		13.9	□□□□□ -0.18
PPP4R3B-204	ENST00000612688		A0A087WWV3	80 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms