RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 KAZALD1Q96I82 304 aa22.79■■□□□ 1.24
SEMA3B-211ENST00000612509 L3MBTL3Q96JM7 780 aaPredicted RBP22.79■■□□□ 1.24
SEMA3B-211ENST00000612509 EYA3Q99504 573 aa22.79■■□□□ 1.24
SEMA3B-211ENST00000612509 GGA1Q9UJY5 639 aa22.79■■□□□ 1.24
SEMA3B-211ENST00000612509 POTECB2RU33 542 aa22.78■■□□□ 1.24
SEMA3B-211ENST00000612509 IFIT5Q13325 482 aaKnown RBP22.78■■□□□ 1.24
SEMA3B-211ENST00000612509 WASHC4Q2M389 1173 aa22.78■■□□□ 1.24
SEMA3B-211ENST00000612509 C16orf71Q8IYS4 520 aaPredicted RBP22.78■■□□□ 1.24
SEMA3B-211ENST00000612509 GPC2Q8N158 579 aa22.78■■□□□ 1.24
SEMA3B-211ENST00000612509 GPR101Q96P66 508 aaPredicted RBP22.78■■□□□ 1.24
SEMA3B-211ENST00000612509 TOMM70O94826 608 aa22.77■■□□□ 1.24
SEMA3B-211ENST00000612509 MPHOSPH8Q99549 860 aa22.77■■□□□ 1.24
SEMA3B-211ENST00000612509 USP44Q9H0E7 712 aa22.77■■□□□ 1.24
SEMA3B-211ENST00000612509 ZNRF3Q9ULT6 936 aa22.77■■□□□ 1.24
SEMA3B-211ENST00000612509 MINPP1Q9UNW1 487 aa22.77■■□□□ 1.24
SEMA3B-211ENST00000612509 BICC1Q9H694 974 aaKnown RBP22.76■■□□□ 1.23
SEMA3B-211ENST00000612509 IQCA1LA6NCM1 817 aa22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 RIMBP2O15034 1052 aa22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 IPO8O15397 1037 aaKnown RBP22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 TRIM27P14373 513 aa22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 ATP2B4P23634 1241 aa22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 CCDC57Q2TAC2 916 aa22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 RABL6Q3YEC7 729 aaPredicted RBP22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 ANKRD44Q8N8A2 993 aa22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 RBM46Q8TBY0 533 aaKnown RBP22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 FRAT1Q92837 279 aaPredicted RBP22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 GJA3Q9Y6H8 435 aa22.75■■□□□ 1.23
SEMA3B-211ENST00000612509 YDJCA8MPS7 323 aa22.74■■□□□ 1.23
SEMA3B-211ENST00000612509 ATF7IPQ6VMQ6 1270 aa22.74■■□□□ 1.23
SEMA3B-211ENST00000612509 DBNDD1Q9H9R9 158 aa22.74■■□□□ 1.23
SEMA3B-211ENST00000612509 TAF7LQ5H9L4 462 aa22.73■■□□□ 1.23
SEMA3B-211ENST00000612509 MED23Q9ULK4 1368 aa22.73■■□□□ 1.23
SEMA3B-211ENST00000612509 SCN9AQ15858 1988 aa22.72■■□□□ 1.23
SEMA3B-211ENST00000612509 ECE2O60344 883 aa22.72■■□□□ 1.23
SEMA3B-211ENST00000612509 CHRNDQ07001 517 aa22.72■■□□□ 1.23
SEMA3B-211ENST00000612509 CXCL9Q07325 125 aa22.72■■□□□ 1.23
SEMA3B-211ENST00000612509 INTS3Q68E01 1043 aaKnown RBP22.72■■□□□ 1.23
SEMA3B-211ENST00000612509 ZNF594Q96JF6 807 aaPredicted RBP22.72■■□□□ 1.23
SEMA3B-211ENST00000612509 ZC3H12CQ9C0D7 883 aaKnown RBP22.72■■□□□ 1.23
SEMA3B-211ENST00000612509 TNNQ9UQP3 1299 aa22.72■■□□□ 1.23
SEMA3B-211ENST00000612509 PSME4Q14997 1843 aa22.72■■□□□ 1.23
SEMA3B-211ENST00000612509 UBTFL1P0CB47 393 aaPredicted RBP22.71■■□□□ 1.23
SEMA3B-211ENST00000612509 ZKSCAN2Q63HK3 967 aa22.71■■□□□ 1.23
SEMA3B-211ENST00000612509 CIAPIN1Q6FI81 312 aa22.71■■□□□ 1.23
SEMA3B-211ENST00000612509 ANKRD2Q9GZV1 360 aa22.71■■□□□ 1.23
SEMA3B-211ENST00000612509 HACL1Q9UJ83 578 aa22.71■■□□□ 1.23
SEMA3B-211ENST00000612509 ADAMTSL1Q8N6G6 1762 aa22.71■■□□□ 1.23
SEMA3B-211ENST00000612509 RAD17O75943 681 aa22.7■■□□□ 1.22
SEMA3B-211ENST00000612509 SCNN1DP51172 638 aa22.7■■□□□ 1.22
SEMA3B-211ENST00000612509 DOK7Q18PE1 504 aa22.7■■□□□ 1.22
SEMA3B-211ENST00000612509 TAF1DQ9H5J8 278 aaPredicted RBP22.7■■□□□ 1.22
SEMA3B-211ENST00000612509 WTIPA6NIX2 430 aaPredicted RBP22.69■■□□□ 1.22
SEMA3B-211ENST00000612509 MEIS3Q99687 375 aa22.69■■□□□ 1.22
SEMA3B-211ENST00000612509 LEMD3Q9Y2U8 911 aa22.69■■□□□ 1.22
SEMA3B-211ENST00000612509 ZNF804BA4D1E1 1349 aa22.68■■□□□ 1.22
SEMA3B-211ENST00000612509 LMOD1P29536 600 aaPredicted RBP22.68■■□□□ 1.22
SEMA3B-211ENST00000612509 LDHAL6AQ6ZMR3 332 aa22.68■■□□□ 1.22
SEMA3B-211ENST00000612509 SMC1BQ8NDV3 1235 aa22.68■■□□□ 1.22
SEMA3B-211ENST00000612509 CLUAP1Q96AJ1 413 aa22.68■■□□□ 1.22
SEMA3B-211ENST00000612509 CNNM1Q9NRU3 951 aa22.68■■□□□ 1.22
SEMA3B-211ENST00000612509 EPHX2P34913 555 aa22.67■■□□□ 1.22
SEMA3B-211ENST00000612509 FSTL1Q12841 308 aa22.67■■□□□ 1.22
SEMA3B-211ENST00000612509 TNIP1Q15025 636 aa22.67■■□□□ 1.22
SEMA3B-211ENST00000612509 ZNF646O15015 1829 aaPredicted RBP22.66■■□□□ 1.22
SEMA3B-211ENST00000612509 G3V3G9 751 aa22.66■■□□□ 1.22
SEMA3B-211ENST00000612509 POTEIP0CG38 1075 aa22.66■■□□□ 1.22
SEMA3B-211ENST00000612509 POTEJP0CG39 1038 aa22.66■■□□□ 1.22
SEMA3B-211ENST00000612509 KCNJ4P48050 445 aa22.66■■□□□ 1.22
SEMA3B-211ENST00000612509 GMPSP49915 693 aaPredicted RBP22.66■■□□□ 1.22
SEMA3B-211ENST00000612509 DCAF8Q5TAQ9 597 aa22.66■■□□□ 1.22
SEMA3B-211ENST00000612509 LRRFIP2Q9Y608 721 aaKnown RBP22.66■■□□□ 1.22
SEMA3B-211ENST00000612509 PSMD14O00487 310 aa22.65■■□□□ 1.22
SEMA3B-211ENST00000612509 TAF5LO75529 589 aa22.65■■□□□ 1.22
SEMA3B-211ENST00000612509 KLRK1P26718 216 aa22.65■■□□□ 1.22
SEMA3B-211ENST00000612509 TMEM57Q8N5G2 664 aa22.65■■□□□ 1.22
SEMA3B-211ENST00000612509 HELBQ8NG08 1087 aaPredicted RBP22.65■■□□□ 1.22
SEMA3B-211ENST00000612509 EAPPQ56P03 285 aaPredicted RBP22.64■■□□□ 1.21
SEMA3B-211ENST00000612509 PUS3Q9BZE2 481 aaKnown RBP22.64■■□□□ 1.21
SEMA3B-211ENST00000612509 GPRC5DQ9NZD1 345 aa22.64■■□□□ 1.21
SEMA3B-211ENST00000612509 HDAC5Q9UQL6 1122 aa22.64■■□□□ 1.21
SEMA3B-211ENST00000612509 GNAI3P08754 354 aa22.63■■□□□ 1.21
SEMA3B-211ENST00000612509 HSPA6P17066 643 aa22.63■■□□□ 1.21
SEMA3B-211ENST00000612509 EPS15P42566 896 aa22.63■■□□□ 1.21
SEMA3B-211ENST00000612509 TXNRD3Q86VQ6 643 aa22.63■■□□□ 1.21
SEMA3B-211ENST00000612509 LDHDQ86WU2 507 aa22.63■■□□□ 1.21
SEMA3B-211ENST00000612509 FTSJ3Q8IY81 847 aaKnown RBP22.63■■□□□ 1.21
SEMA3B-211ENST00000612509 KLHDC4Q8TBB5 520 aa22.63■■□□□ 1.21
SEMA3B-211ENST00000612509 KCNQ5Q9NR82 932 aa22.63■■□□□ 1.21
SEMA3B-211ENST00000612509 ZNF609O15014 1411 aa22.63■■□□□ 1.21
SEMA3B-211ENST00000612509 IRS2Q9Y4H2 1338 aa22.62■■□□□ 1.21
SEMA3B-211ENST00000612509 SNAP23O00161 211 aa22.62■■□□□ 1.21
SEMA3B-211ENST00000612509 RFX5P48382 616 aaPredicted RBP22.62■■□□□ 1.21
SEMA3B-211ENST00000612509 CHADLQ6NUI6 762 aa22.62■■□□□ 1.21
SEMA3B-211ENST00000612509 PNMA8AQ86V59 439 aaPredicted RBP22.62■■□□□ 1.21
SEMA3B-211ENST00000612509 PODNQ7Z5L7 613 aa22.61■■□□□ 1.21
SEMA3B-211ENST00000612509 DZIP1LQ8IYY4 767 aaKnown RBP22.61■■□□□ 1.21
SEMA3B-211ENST00000612509 COA1Q9GZY4 146 aa22.61■■□□□ 1.21
SEMA3B-211ENST00000612509 ZBTB12Q9Y330 459 aaPredicted RBP22.61■■□□□ 1.21
SEMA3B-211ENST00000612509 RIPOR2Q9Y4F9 1068 aa22.61■■□□□ 1.21
SEMA3B-211ENST00000612509 MROH5Q6ZUA9 1318 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms