RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 PITPNM2Q9BZ72 1349 aa13□□□□□ -0.33
PPARGC1A-216ENST00000612355 VIL1P09327 827 aaKnown RBP13□□□□□ -0.33
PPARGC1A-216ENST00000612355 ZNF280AP59817 542 aaPredicted RBP13□□□□□ -0.33
PPARGC1A-216ENST00000612355 FBXO46Q6PJ61 603 aaPredicted RBP13□□□□□ -0.33
PPARGC1A-216ENST00000612355 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
PPARGC1A-216ENST00000612355 CFHR5Q9BXR6 569 aa13□□□□□ -0.33
PPARGC1A-216ENST00000612355 PCGF6Q9BYE7 350 aa13□□□□□ -0.33
PPARGC1A-216ENST00000612355 KCNQ5Q9NR82 932 aa13□□□□□ -0.33
PPARGC1A-216ENST00000612355 TRMT112Q9UI30 125 aaKnown RBP13□□□□□ -0.33
PPARGC1A-216ENST00000612355 RANBP2P49792 3224 aaKnown RBP13□□□□□ -0.33
PPARGC1A-216ENST00000612355 TCIRG1Q13488 830 aa12.99□□□□□ -0.33
PPARGC1A-216ENST00000612355 SF3B3Q15393 1217 aaKnown RBP12.99□□□□□ -0.33
PPARGC1A-216ENST00000612355 NFE2L2Q16236 605 aa12.99□□□□□ -0.33
PPARGC1A-216ENST00000612355 HABP4Q5JVS0 413 aaKnown RBP12.99□□□□□ -0.33
PPARGC1A-216ENST00000612355 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
PPARGC1A-216ENST00000612355 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
PPARGC1A-216ENST00000612355 CELF1Q92879 486 aaKnown RBP12.99□□□□□ -0.33
PPARGC1A-216ENST00000612355 EYA3Q99504 573 aa12.99□□□□□ -0.33
PPARGC1A-216ENST00000612355 HDAC9Q9UKV0 1011 aa12.99□□□□□ -0.33
PPARGC1A-216ENST00000612355 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
PPARGC1A-216ENST00000612355 ANXA1P04083 346 aa12.98□□□□□ -0.33
PPARGC1A-216ENST00000612355 GPSM2P81274 684 aa12.98□□□□□ -0.33
PPARGC1A-216ENST00000612355 ANGEL2Q5VTE6 544 aaKnown RBP12.98□□□□□ -0.33
PPARGC1A-216ENST00000612355 C6orf229H3BNL8 230 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 GPR25O00155 361 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 NEFMP07197 916 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 TM4SF4P48230 202 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 COPS6Q7L5N1 327 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 AGBL3Q8NEM8 1001 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 TBC1D16Q8TBP0 767 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 XAGE3Q8WTP9 111 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 TSPYL4Q9UJ04 414 aa12.97□□□□□ -0.33
PPARGC1A-216ENST00000612355 TBC1D8O95759 1140 aa12.96□□□□□ -0.33
PPARGC1A-216ENST00000612355 EIF2S2P20042 333 aaKnown RBP12.96□□□□□ -0.33
PPARGC1A-216ENST00000612355 SCARF1Q14162 830 aa12.96□□□□□ -0.33
PPARGC1A-216ENST00000612355 GMLQ99445 158 aa12.96□□□□□ -0.33
PPARGC1A-216ENST00000612355 RSBN1LQ6PCB5 846 aaPredicted RBP12.95□□□□□ -0.34
PPARGC1A-216ENST00000612355 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
PPARGC1A-216ENST00000612355 AIMP1Q12904 312 aaKnown RBP12.94□□□□□ -0.34
PPARGC1A-216ENST00000612355 MOB2Q70IA6 237 aa12.94□□□□□ -0.34
PPARGC1A-216ENST00000612355 FKTNO75072 461 aa12.93□□□□□ -0.34
PPARGC1A-216ENST00000612355 RPS8P62241 208 aaKnown RBP12.93□□□□□ -0.34
PPARGC1A-216ENST00000612355 SREBF2Q12772 1141 aa12.93□□□□□ -0.34
PPARGC1A-216ENST00000612355 ZC3H12CQ9C0D7 883 aaKnown RBP12.93□□□□□ -0.34
PPARGC1A-216ENST00000612355 MYOZ2Q9NPC6 264 aa12.93□□□□□ -0.34
PPARGC1A-216ENST00000612355 UBE2Q2LH0YL09 131 aa12.92□□□□□ -0.34
PPARGC1A-216ENST00000612355 USP17L8P0C7I0 530 aa12.92□□□□□ -0.34
PPARGC1A-216ENST00000612355 FXR1P51114 621 aaKnown RBP eCLIP12.92□□□□□ -0.34
PPARGC1A-216ENST00000612355 PLBD2Q8NHP8 589 aa12.92□□□□□ -0.34
PPARGC1A-216ENST00000612355 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
PPARGC1A-216ENST00000612355 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
PPARGC1A-216ENST00000612355 UFL1O94874 794 aa12.91□□□□□ -0.34
PPARGC1A-216ENST00000612355 TRIM28Q13263 835 aaKnown RBP12.91□□□□□ -0.34
PPARGC1A-216ENST00000612355 INTS3Q68E01 1043 aaKnown RBP12.91□□□□□ -0.34
PPARGC1A-216ENST00000612355 R3HDMLQ9H3Y0 253 aa12.91□□□□□ -0.34
PPARGC1A-216ENST00000612355 GGA1Q9UJY5 639 aa12.91□□□□□ -0.34
PPARGC1A-216ENST00000612355 ECM29Q5VYK3 1845 aa12.9□□□□□ -0.34
PPARGC1A-216ENST00000612355 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
PPARGC1A-216ENST00000612355 ALDH1A1P00352 501 aa12.9□□□□□ -0.34
PPARGC1A-216ENST00000612355 PNNQ9H307 717 aaKnown RBP12.9□□□□□ -0.34
PPARGC1A-216ENST00000612355 MYH3P11055 1940 aa12.9□□□□□ -0.35
PPARGC1A-216ENST00000612355 IRS4O14654 1257 aaPredicted RBP12.89□□□□□ -0.35
PPARGC1A-216ENST00000612355 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
PPARGC1A-216ENST00000612355 PODNQ7Z5L7 613 aa12.89□□□□□ -0.35
PPARGC1A-216ENST00000612355 CHPF2Q9P2E5 772 aa12.89□□□□□ -0.35
PPARGC1A-216ENST00000612355 ANKIB1Q9P2G1 1089 aa12.89□□□□□ -0.35
PPARGC1A-216ENST00000612355 XDHP47989 1333 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 LAMA3Q16787 3333 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 A0A0C4DFX4 3053 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 USP17L3A6NCW0 530 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 USP17L4A6NCW7 530 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 ATP5J2-PTCD1G3V325 749 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 G3V3G9 751 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 HOXB7P09629 217 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 NF2P35240 595 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 NBPF9Q3BBW0 867 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 SPRYD7Q5W111 196 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 OTOP1Q7RTM1 612 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 USP17L1Q7RTZ2 530 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 CCER1Q8TC90 406 aaPredicted RBP12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 SEC31BQ9NQW1 1179 aa12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 SCAF8Q9UPN6 1271 aaKnown RBP12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 COL1A1P02452 1464 aaPredicted RBP12.88□□□□□ -0.35
PPARGC1A-216ENST00000612355 MED23Q9ULK4 1368 aa12.87□□□□□ -0.35
PPARGC1A-216ENST00000612355 WNT10BO00744 389 aa12.87□□□□□ -0.35
PPARGC1A-216ENST00000612355 MMP14P50281 582 aa12.87□□□□□ -0.35
PPARGC1A-216ENST00000612355 PTPN12Q05209 780 aaKnown RBP12.87□□□□□ -0.35
PPARGC1A-216ENST00000612355 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
PPARGC1A-216ENST00000612355 TTLL12Q14166 644 aaPredicted RBP12.87□□□□□ -0.35
PPARGC1A-216ENST00000612355 PRAMEF18Q5VWM3 479 aa12.87□□□□□ -0.35
PPARGC1A-216ENST00000612355 ARMC5Q96C12 935 aa12.87□□□□□ -0.35
PPARGC1A-216ENST00000612355 TRIM17Q9Y577 477 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms