RNA–Protein interactions for RNA: ENST00000612292.1

MMP28-202, Transcript of matrix metallopeptidase 28, humanhuman

TSL 5

Gene MMP28, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-202ENST00000612292 GRM8O00222 908 aa23.41■■□□□ 1.34
MMP28-202ENST00000612292 RAD17O75943 681 aa23.41■■□□□ 1.34
MMP28-202ENST00000612292 ALDH1L2Q3SY69 923 aa23.41■■□□□ 1.34
MMP28-202ENST00000612292 SLC4A10Q6U841 1118 aa23.41■■□□□ 1.34
MMP28-202ENST00000612292 GPR101Q96P66 508 aaPredicted RBP23.41■■□□□ 1.34
MMP28-202ENST00000612292 SPEF2Q9C093 1822 aa23.4■■□□□ 1.34
MMP28-202ENST00000612292 ITGA6P23229 1130 aa23.4■■□□□ 1.34
MMP28-202ENST00000612292 HTRA3P83110 453 aa23.4■■□□□ 1.34
MMP28-202ENST00000612292 TNIP1Q15025 636 aa23.4■■□□□ 1.34
MMP28-202ENST00000612292 ZC3H12CQ9C0D7 883 aaKnown RBP23.4■■□□□ 1.34
MMP28-202ENST00000612292 SRCIN1Q9C0H9 1055 aa23.4■■□□□ 1.34
MMP28-202ENST00000612292 GGA1Q9UJY5 639 aa23.4■■□□□ 1.34
MMP28-202ENST00000612292 PTPRCP08575 1304 aa23.39■■□□□ 1.34
MMP28-202ENST00000612292 XDHP47989 1333 aa23.39■■□□□ 1.34
MMP28-202ENST00000612292 ITGBL1O95965 494 aaPredicted RBP23.39■■□□□ 1.33
MMP28-202ENST00000612292 CT47B1P0C2W7 299 aaPredicted RBP23.39■■□□□ 1.33
MMP28-202ENST00000612292 LMOD1P29536 600 aaPredicted RBP23.39■■□□□ 1.33
MMP28-202ENST00000612292 FAM161AQ3B820 660 aa23.39■■□□□ 1.33
MMP28-202ENST00000612292 EAPPQ56P03 285 aaPredicted RBP23.39■■□□□ 1.33
MMP28-202ENST00000612292 DBNDD1Q9H9R9 158 aa23.39■■□□□ 1.33
MMP28-202ENST00000612292 GPRC5DQ9NZD1 345 aa23.39■■□□□ 1.33
MMP28-202ENST00000612292 WTIPA6NIX2 430 aaPredicted RBP23.38■■□□□ 1.33
MMP28-202ENST00000612292 UFL1O94874 794 aa23.38■■□□□ 1.33
MMP28-202ENST00000612292 ATP2B4P23634 1241 aa23.38■■□□□ 1.33
MMP28-202ENST00000612292 DOK7Q18PE1 504 aa23.38■■□□□ 1.33
MMP28-202ENST00000612292 EPHA10Q5JZY3 1008 aa23.38■■□□□ 1.33
MMP28-202ENST00000612292 KCNQ5Q9NR82 932 aa23.38■■□□□ 1.33
MMP28-202ENST00000612292 GMPSP49915 693 aaPredicted RBP23.37■■□□□ 1.33
MMP28-202ENST00000612292 BCL2L13Q9BXK5 485 aa23.37■■□□□ 1.33
MMP28-202ENST00000612292 C9orf78Q9NZ63 289 aaPredicted RBP23.37■■□□□ 1.33
MMP28-202ENST00000612292 UTYO14607 1347 aa23.36■■□□□ 1.33
MMP28-202ENST00000612292 ECE2O60344 883 aa23.36■■□□□ 1.33
MMP28-202ENST00000612292 IGHMBP2P38935 993 aaKnown RBP23.36■■□□□ 1.33
MMP28-202ENST00000612292 USP50Q70EL3 339 aaPredicted RBP23.36■■□□□ 1.33
MMP28-202ENST00000612292 CLEC11AQ9Y240 323 aa23.36■■□□□ 1.33
MMP28-202ENST00000612292 SCN9AQ15858 1988 aa23.36■■□□□ 1.33
MMP28-202ENST00000612292 PASKQ96RG2 1323 aa23.35■■□□□ 1.33
MMP28-202ENST00000612292 PSMD14O00487 310 aa23.35■■□□□ 1.33
MMP28-202ENST00000612292 BRPF1P55201 1214 aaPredicted RBP23.35■■□□□ 1.33
MMP28-202ENST00000612292 LMBR1LQ6UX01 489 aa23.35■■□□□ 1.33
MMP28-202ENST00000612292 KAZALD1Q96I82 304 aa23.35■■□□□ 1.33
MMP28-202ENST00000612292 ANKRD18BA2A2Z9 1011 aa23.34■■□□□ 1.33
MMP28-202ENST00000612292 NBPF7P0C2Y1 421 aaPredicted RBP23.34■■□□□ 1.33
MMP28-202ENST00000612292 CCT4P50991 539 aaKnown RBP23.34■■□□□ 1.33
MMP28-202ENST00000612292 CNTROBQ8N137 903 aa23.34■■□□□ 1.33
MMP28-202ENST00000612292 DPF2Q92785 391 aa23.34■■□□□ 1.33
MMP28-202ENST00000612292 ADARB2Q9NS39 739 aaKnown RBP23.34■■□□□ 1.33
MMP28-202ENST00000612292 IFIT5Q13325 482 aaKnown RBP23.33■■□□□ 1.33
MMP28-202ENST00000612292 MAP1SQ66K74 1059 aaPredicted RBP23.33■■□□□ 1.33
MMP28-202ENST00000612292 MPHOSPH8Q99549 860 aa23.33■■□□□ 1.33
MMP28-202ENST00000612292 CNOT7Q9UIV1 285 aaKnown RBP23.33■■□□□ 1.33
MMP28-202ENST00000612292 LEMD3Q9Y2U8 911 aa23.33■■□□□ 1.33
MMP28-202ENST00000612292 ZBTB12Q9Y330 459 aaPredicted RBP23.33■■□□□ 1.33
MMP28-202ENST00000612292 VIL1P09327 827 aaKnown RBP23.32■■□□□ 1.32
MMP28-202ENST00000612292 SUCLG2Q96I99 432 aa23.32■■□□□ 1.32
MMP28-202ENST00000612292 SMC4Q9NTJ3 1288 aa23.32■■□□□ 1.32
MMP28-202ENST00000612292 KLRG1Q96E93 195 aa23.31■■□□□ 1.32
MMP28-202ENST00000612292 ANKRD2Q9GZV1 360 aa23.31■■□□□ 1.32
MMP28-202ENST00000612292 PGAP2Q9UHJ9 254 aa23.31■■□□□ 1.32
MMP28-202ENST00000612292 SHTN1A0MZ66 631 aa23.3■■□□□ 1.32
MMP28-202ENST00000612292 RARSP54136 660 aaKnown RBP23.3■■□□□ 1.32
MMP28-202ENST00000612292 HIRAP54198 1017 aaPredicted RBP23.3■■□□□ 1.32
MMP28-202ENST00000612292 CHRNDQ07001 517 aa23.3■■□□□ 1.32
MMP28-202ENST00000612292 USP44Q9H0E7 712 aa23.3■■□□□ 1.32
MMP28-202ENST00000612292 PSME4Q14997 1843 aa23.3■■□□□ 1.32
MMP28-202ENST00000612292 MED23Q9ULK4 1368 aa23.29■■□□□ 1.32
MMP28-202ENST00000612292 G3V3G9 751 aa23.29■■□□□ 1.32
MMP28-202ENST00000612292 DCAF8Q5TAQ9 597 aa23.29■■□□□ 1.32
MMP28-202ENST00000612292 PODNQ7Z5L7 613 aa23.29■■□□□ 1.32
MMP28-202ENST00000612292 TXNRD3Q86VQ6 643 aa23.29■■□□□ 1.32
MMP28-202ENST00000612292 CREBZFQ9NS37 354 aa23.29■■□□□ 1.32
MMP28-202ENST00000612292 NOB1Q9ULX3 412 aaKnown RBP23.29■■□□□ 1.32
MMP28-202ENST00000612292 CHMP3Q9Y3E7 222 aa23.29■■□□□ 1.32
MMP28-202ENST00000612292 RPS12P25398 132 aaKnown RBP23.28■■□□□ 1.32
MMP28-202ENST00000612292 CCDC57Q2TAC2 916 aa23.28■■□□□ 1.32
MMP28-202ENST00000612292 ZNF594Q96JF6 807 aaPredicted RBP23.28■■□□□ 1.32
MMP28-202ENST00000612292 ZNF804BA4D1E1 1349 aa23.28■■□□□ 1.32
MMP28-202ENST00000612292 H7C1D1 291 aa23.27■■□□□ 1.32
MMP28-202ENST00000612292 RABL6Q3YEC7 729 aaPredicted RBP23.27■■□□□ 1.32
MMP28-202ENST00000612292 MICALL2Q8IY33 904 aa23.27■■□□□ 1.32
MMP28-202ENST00000612292 HNRNPUQ00839 825 aaKnown RBP eCLIP23.26■■□□□ 1.31
MMP28-202ENST00000612292 JMYQ8N9B5 988 aa23.26■■□□□ 1.31
MMP28-202ENST00000612292 TRPM4Q8TD43 1214 aa23.26■■□□□ 1.31
MMP28-202ENST00000612292 ZC3H15Q8WU90 426 aaKnown RBP23.26■■□□□ 1.31
MMP28-202ENST00000612292 A0A1B0GUL6 1792 aa23.25■■□□□ 1.31
MMP28-202ENST00000612292 LDHAL6AQ6ZMR3 332 aa23.25■■□□□ 1.31
MMP28-202ENST00000612292 ANKRD44Q8N8A2 993 aa23.25■■□□□ 1.31
MMP28-202ENST00000612292 HELBQ8NG08 1087 aaPredicted RBP23.25■■□□□ 1.31
MMP28-202ENST00000612292 GMLQ99445 158 aa23.25■■□□□ 1.31
MMP28-202ENST00000612292 COA1Q9GZY4 146 aa23.25■■□□□ 1.31
MMP28-202ENST00000612292 BICC1Q9H694 974 aaKnown RBP23.25■■□□□ 1.31
MMP28-202ENST00000612292 IRS2Q9Y4H2 1338 aa23.25■■□□□ 1.31
MMP28-202ENST00000612292 USP17L3A6NCW0 530 aa23.24■■□□□ 1.31
MMP28-202ENST00000612292 USP17L4A6NCW7 530 aa23.24■■□□□ 1.31
MMP28-202ENST00000612292 SNAP23O00161 211 aa23.24■■□□□ 1.31
MMP28-202ENST00000612292 TAF5LO75529 589 aa23.24■■□□□ 1.31
MMP28-202ENST00000612292 KLRK1P26718 216 aa23.24■■□□□ 1.31
MMP28-202ENST00000612292 RSBN1LQ6PCB5 846 aaPredicted RBP23.24■■□□□ 1.31
MMP28-202ENST00000612292 USP17L1Q7RTZ2 530 aa23.24■■□□□ 1.31
MMP28-202ENST00000612292 SAMD7Q7Z3H4 446 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms