RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 BCL2L12Q9HB09 334 aa10□□□□□ -0.81
TARDBP-213ENST00000611963 IL1RAPL2Q9NP60 686 aa10□□□□□ -0.81
TARDBP-213ENST00000611963 NARFQ9UHQ1 456 aa10□□□□□ -0.81
TARDBP-213ENST00000611963 NOP58Q9Y2X3 529 aaKnown RBP10□□□□□ -0.81
TARDBP-213ENST00000611963 CDHR2Q9BYE9 1310 aa10□□□□□ -0.81
TARDBP-213ENST00000611963 USP42Q9H9J4 1324 aaKnown RBP10□□□□□ -0.81
TARDBP-213ENST00000611963 IRS4O14654 1257 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-213ENST00000611963 RIOK3O14730 519 aaKnown RBP9.99□□□□□ -0.81
TARDBP-213ENST00000611963 ZPR1O75312 459 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 RFC4P35249 363 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 PDAP1Q13442 181 aaKnown RBP9.99□□□□□ -0.81
TARDBP-213ENST00000611963 GPR162Q16538 588 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 FAM161AQ3B820 660 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 PARP10Q53GL7 1025 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 TBC1D9BQ66K14 1250 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 CLEC4GQ6UXB4 293 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 BICDL1Q6ZP65 573 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 PLEKHM2Q8IWE5 1019 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 NLGN1Q8N2Q7 840 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 RHPN1Q8TCX5 695 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 SLC39A7Q92504 469 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 CCDC85AQ96PX6 553 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-213ENST00000611963 UTP14AQ9BVJ6 771 aaKnown RBP9.99□□□□□ -0.81
TARDBP-213ENST00000611963 PLA2G12BQ9BX93 195 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 TAF1P21675 1872 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
TARDBP-213ENST00000611963 NTSR2O95665 410 aa9.98□□□□□ -0.81
TARDBP-213ENST00000611963 HCLS1P14317 486 aaPredicted RBP9.98□□□□□ -0.81
TARDBP-213ENST00000611963 PTPN12Q05209 780 aaKnown RBP9.98□□□□□ -0.81
TARDBP-213ENST00000611963 G3BP1Q13283 466 aaKnown RBP eCLIP9.98□□□□□ -0.815e-9■□□□□ 10.1
TARDBP-213ENST00000611963 C8orf34Q49A92 452 aa9.98□□□□□ -0.81
TARDBP-213ENST00000611963 HSP90AB4PQ58FF6 505 aa9.98□□□□□ -0.81
TARDBP-213ENST00000611963 TSHZ3Q63HK5 1081 aa9.98□□□□□ -0.81
TARDBP-213ENST00000611963 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
TARDBP-213ENST00000611963 KIF1BPQ96EK5 621 aa9.98□□□□□ -0.81
TARDBP-213ENST00000611963 ZNF594Q96JF6 807 aaPredicted RBP9.98□□□□□ -0.81
TARDBP-213ENST00000611963 BACH2Q9BYV9 841 aa9.98□□□□□ -0.81
TARDBP-213ENST00000611963 C10orf71Q711Q0 1435 aa9.98□□□□□ -0.81
TARDBP-213ENST00000611963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.97□□□□□ -0.81
TARDBP-213ENST00000611963 SASH1O94885 1247 aa9.97□□□□□ -0.81
TARDBP-213ENST00000611963 POTEJP0CG39 1038 aa9.97□□□□□ -0.81
TARDBP-213ENST00000611963 C7P10643 843 aa9.97□□□□□ -0.81
TARDBP-213ENST00000611963 CTSWP56202 376 aa9.97□□□□□ -0.81
TARDBP-213ENST00000611963 DDR1Q08345 913 aa9.97□□□□□ -0.81
TARDBP-213ENST00000611963 ZFP91Q96JP5 570 aaPredicted RBP9.97□□□□□ -0.81
TARDBP-213ENST00000611963 COPRSQ9NQ92 184 aa9.97□□□□□ -0.81
TARDBP-213ENST00000611963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.97□□□□□ -0.81
TARDBP-213ENST00000611963 KIF13BQ9NQT8 1826 aa9.97□□□□□ -0.81
TARDBP-213ENST00000611963 SH3TC1Q8TE82 1336 aa9.97□□□□□ -0.81
TARDBP-213ENST00000611963 CHD4Q14839 1912 aa9.96□□□□□ -0.81
TARDBP-213ENST00000611963 PDE8AO60658 829 aa9.96□□□□□ -0.82
TARDBP-213ENST00000611963 CSF1RP07333 972 aa9.96□□□□□ -0.82
TARDBP-213ENST00000611963 GSPT1P15170 499 aaKnown RBP9.96□□□□□ -0.82
TARDBP-213ENST00000611963 TTC22Q5TAA0 569 aa9.96□□□□□ -0.82
TARDBP-213ENST00000611963 ERC1Q8IUD2 1116 aa9.96□□□□□ -0.82
TARDBP-213ENST00000611963 TTLL11Q8NHH1 800 aa9.96□□□□□ -0.82
TARDBP-213ENST00000611963 GREM2Q9H772 168 aa9.96□□□□□ -0.82
TARDBP-213ENST00000611963 WWC3Q9ULE0 1092 aa9.96□□□□□ -0.82
TARDBP-213ENST00000611963 SALL3Q9BXA9 1300 aa9.96□□□□□ -0.82
TARDBP-213ENST00000611963 ABCC12Q96J65 1359 aa9.96□□□□□ -0.82
TARDBP-213ENST00000611963 MX1P20591 662 aa9.95□□□□□ -0.82
TARDBP-213ENST00000611963 TM4SF1P30408 202 aa9.95□□□□□ -0.82
TARDBP-213ENST00000611963 PDE1AP54750 535 aa9.95□□□□□ -0.82
TARDBP-213ENST00000611963 CCDC57Q2TAC2 916 aa9.95□□□□□ -0.82
TARDBP-213ENST00000611963 ERFEQ4G0M1 354 aa9.95□□□□□ -0.82
TARDBP-213ENST00000611963 LRRC24Q50LG9 513 aa9.95□□□□□ -0.82
TARDBP-213ENST00000611963 TAF7LQ5H9L4 462 aa9.95□□□□□ -0.82
TARDBP-213ENST00000611963 SETDB2Q96T68 719 aa9.95□□□□□ -0.82
TARDBP-213ENST00000611963 PUS3Q9BZE2 481 aaKnown RBP9.95□□□□□ -0.82
TARDBP-213ENST00000611963 TNRC6CQ9HCJ0 1690 aaKnown RBP9.95□□□□□ -0.82
TARDBP-213ENST00000611963 COL4A1P02462 1669 aa9.94□□□□□ -0.82
TARDBP-213ENST00000611963 POLRMTO00411 1230 aaKnown RBP9.94□□□□□ -0.82
TARDBP-213ENST00000611963 ITGA6P23229 1130 aa9.94□□□□□ -0.82
TARDBP-213ENST00000611963 TFCP2Q12800 502 aa9.94□□□□□ -0.82
TARDBP-213ENST00000611963 IFIT5Q13325 482 aaKnown RBP9.94□□□□□ -0.82
TARDBP-213ENST00000611963 NFIXQ14938 502 aa9.94□□□□□ -0.82
TARDBP-213ENST00000611963 BMP2KLQ5H9B9 411 aa9.94□□□□□ -0.82
TARDBP-213ENST00000611963 C3orf67Q6ZVT6 689 aa9.94□□□□□ -0.82
TARDBP-213ENST00000611963 ATG9AQ7Z3C6 839 aa9.94□□□□□ -0.82
TARDBP-213ENST00000611963 AACSQ86V21 672 aa9.94□□□□□ -0.82
TARDBP-213ENST00000611963 NBPF5PQ86XG9 351 aaPredicted RBP9.94□□□□□ -0.82
TARDBP-213ENST00000611963 CLASRPQ8N2M8 674 aaKnown RBP9.94□□□□□ -0.82
TARDBP-213ENST00000611963 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
TARDBP-213ENST00000611963 ZNF784Q8NCA9 323 aaPredicted RBP9.94□□□□□ -0.82
TARDBP-213ENST00000611963 CCDC8Q9H0W5 538 aaPredicted RBP9.94□□□□□ -0.82
TARDBP-213ENST00000611963 RBM19Q9Y4C8 960 aaKnown RBP9.94□□□□□ -0.82
TARDBP-213ENST00000611963 PARP3Q9Y6F1 533 aa9.94□□□□□ -0.82
TARDBP-213ENST00000611963 RIC1Q4ADV7 1423 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 CARMIL3Q8ND23 1372 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 A0A0G2JLW4 131 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 ANKRD18BA2A2Z9 1011 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 EYA2O00167 538 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 GRIN3BO60391 1043 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 SEC24BO95487 1268 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 KCNA3P22001 575 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 TGFB2P61812 414 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 NYXQ9GZU5 481 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 TLR7Q9NYK1 1049 aaKnown RBP9.93□□□□□ -0.82
TARDBP-213ENST00000611963 STAP2Q9UGK3 403 aa9.93□□□□□ -0.82
TARDBP-213ENST00000611963 A0A1B0GUL6 1792 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms