RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 ZSCAN16Q9H4T2 348 aaPredicted RBP15.32■□□□□ 0.04
TCF3-220ENST00000611869 MKNK2Q9HBH9 465 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 ANO10Q9NW15 660 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 TTLL5Q6EMB2 1281 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 UTP14AQ9BVJ6 771 aaKnown RBP15.31■□□□□ 0.04
TCF3-220ENST00000611869 SLC26A6Q9BXS9 759 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 SSRP1Q08945 709 aaKnown RBP15.31■□□□□ 0.04
TCF3-220ENST00000611869 NBPF5PQ86XG9 351 aaPredicted RBP15.31■□□□□ 0.04
TCF3-220ENST00000611869 KLHL34Q8N239 644 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 C8orf37Q96NL8 207 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 OSBPL3Q9H4L5 887 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 PIK3C2BO00750 1634 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 CYP7A1P22680 504 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 ITGA6P23229 1130 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 MNS1Q8NEH6 495 aa15.31■□□□□ 0.04
TCF3-220ENST00000611869 CTCFLQ8NI51 663 aaPredicted RBP15.31■□□□□ 0.04
TCF3-220ENST00000611869 ANKRD18AQ8IVF6 992 aa15.3■□□□□ 0.04
TCF3-220ENST00000611869 RPS6KB1P23443 525 aa15.3■□□□□ 0.04
TCF3-220ENST00000611869 KBTBD3Q8NAB2 608 aa15.3■□□□□ 0.04
TCF3-220ENST00000611869 STAP2Q9UGK3 403 aa15.3■□□□□ 0.04
TCF3-220ENST00000611869 AXIN2Q9Y2T1 843 aa15.3■□□□□ 0.04
TCF3-220ENST00000611869 ISM2Q6H9L7 571 aa15.3■□□□□ 0.04
TCF3-220ENST00000611869 A0A0D9SFI3 127 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 XAGE2Q96GT9 111 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 SLC4A4Q9Y6R1 1079 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 UQCRHLA0A096LP55 91 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 PTPDC1A2A3K4 754 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 UQCRHP07919 91 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.04
TCF3-220ENST00000611869 ANTXR1Q9H6X2 564 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 CLTCQ00610 1675 aaKnown RBP15.29■□□□□ 0.04
TCF3-220ENST00000611869 ZBTB43O43298 467 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 RXRAP19793 462 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 CFAP100Q494V2 611 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 MIGA1Q8NAN2 632 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 FILIP1LQ4L180 1135 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 SOGA3Q5TF21 947 aa15.29■□□□□ 0.04
TCF3-220ENST00000611869 ZNF830Q96NB3 372 aaPredicted RBP15.29■□□□□ 0.04
TCF3-220ENST00000611869 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
TCF3-220ENST00000611869 ALG1Q9BT22 464 aa15.28■□□□□ 0.04
TCF3-220ENST00000611869 LMBRD1Q9NUN5 540 aa15.28■□□□□ 0.04
TCF3-220ENST00000611869 TLR7Q9NYK1 1049 aaKnown RBP15.28■□□□□ 0.04
TCF3-220ENST00000611869 CTAGE5O15320 804 aa15.28■□□□□ 0.04
TCF3-220ENST00000611869 RASEFQ8IZ41 740 aa15.28■□□□□ 0.04
TCF3-220ENST00000611869 FAM177A1Q8N128 213 aaPredicted RBP15.28■□□□□ 0.04
TCF3-220ENST00000611869 CDK5RAP3Q96JB5 506 aa15.28■□□□□ 0.04
TCF3-220ENST00000611869 KIAA1210Q9ULL0 1709 aa15.28■□□□□ 0.04
TCF3-220ENST00000611869 UBAP1LF5GYI3 381 aa15.27■□□□□ 0.04
TCF3-220ENST00000611869 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
TCF3-220ENST00000611869 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
TCF3-220ENST00000611869 MAGEB6Q8N7X4 407 aa15.27■□□□□ 0.04
TCF3-220ENST00000611869 ERVV-2B6SEH9 535 aa15.27■□□□□ 0.04
TCF3-220ENST00000611869 ATP5JP18859 108 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 WTAPQ15007 396 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 KLHL10Q6JEL2 608 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 CATIPQ7Z7H3 387 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 NCOA5Q9HCD5 579 aaKnown RBP15.27■□□□□ 0.03
TCF3-220ENST00000611869 HELLSQ9NRZ9 838 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 CLIP2Q9UDT6 1046 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 CTDP1Q9Y5B0 961 aaPredicted RBP15.27■□□□□ 0.03
TCF3-220ENST00000611869 CPS1P31327 1500 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 SMTNL1A8MU46 457 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 RFC4P35249 363 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 RPGRQ92834 1020 aaKnown RBP15.27■□□□□ 0.03
TCF3-220ENST00000611869 NLRP3Q96P20 1036 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 SETDB2Q96T68 719 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 RBSNQ9H1K0 784 aa15.27■□□□□ 0.03
TCF3-220ENST00000611869 ANKARQ7Z5J8 1434 aa15.26■□□□□ 0.03
TCF3-220ENST00000611869 AK7Q96M32 723 aa15.26■□□□□ 0.03
TCF3-220ENST00000611869 DACH1Q9UI36 760 aa15.26■□□□□ 0.03
TCF3-220ENST00000611869 GADD45BO75293 160 aaPredicted RBP15.26■□□□□ 0.03
TCF3-220ENST00000611869 CNNM3Q8NE01 707 aa15.26■□□□□ 0.03
TCF3-220ENST00000611869 SMARCC1Q92922 1105 aaPredicted RBP15.26■□□□□ 0.03
TCF3-220ENST00000611869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.26■□□□□ 0.03
TCF3-220ENST00000611869 CEP131Q9UPN4 1083 aa15.26■□□□□ 0.03
TCF3-220ENST00000611869 SH3TC1Q8TE82 1336 aa15.26■□□□□ 0.03
TCF3-220ENST00000611869 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
TCF3-220ENST00000611869 C6orf229H3BNL8 230 aa15.26■□□□□ 0.03
TCF3-220ENST00000611869 TCIRG1Q13488 830 aa15.26■□□□□ 0.03
TCF3-220ENST00000611869 ANO6Q4KMQ2 910 aa15.26■□□□□ 0.03
TCF3-220ENST00000611869 TSPY2A6NKD2 308 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 TOM1O60784 492 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 BRD1O95696 1058 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 MARCKSP29966 332 aaPredicted RBP15.25■□□□□ 0.03
TCF3-220ENST00000611869 MYO3AQ8NEV4 1616 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 ZNF444Q8N0Y2 327 aaPredicted RBP15.25■□□□□ 0.03
TCF3-220ENST00000611869 TCEAL9Q9UHQ7 104 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 LRRC24Q50LG9 513 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 CCDC112Q8NEF3 446 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 TAF5LO75529 589 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 PDE4CQ08493 712 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 ME3Q16798 604 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 UVSSAQ2YD98 709 aa15.25■□□□□ 0.03
TCF3-220ENST00000611869 STX1AQ16623 288 aa15.24■□□□□ 0.03
TCF3-220ENST00000611869 JAG2Q9Y219 1238 aa15.24■□□□□ 0.03
TCF3-220ENST00000611869 ZAP70P43403 619 aa15.24■□□□□ 0.03
TCF3-220ENST00000611869 NAA16Q6N069 864 aaPredicted RBP15.24■□□□□ 0.03
TCF3-220ENST00000611869 DNAJC25Q9H1X3 360 aa15.24■□□□□ 0.03
TCF3-220ENST00000611869 DBNLQ9UJU6 430 aaKnown RBP15.24■□□□□ 0.03
TCF3-220ENST00000611869 MROH2AA6NES4 1674 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms