RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 LBX1P52954 281 aa9.52□□□□□ -0.89
CLK4-214ENST00000611575 AMHR2Q16671 573 aa9.52□□□□□ -0.89
CLK4-214ENST00000611575 TPTE2Q6XPS3 522 aa9.52□□□□□ -0.89
CLK4-214ENST00000611575 NBPF5PQ86XG9 351 aaPredicted RBP9.52□□□□□ -0.89
CLK4-214ENST00000611575 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
CLK4-214ENST00000611575 RNF123Q5XPI4 1314 aa9.52□□□□□ -0.89
CLK4-214ENST00000611575 WDR33Q9C0J8 1336 aaKnown RBP9.52□□□□□ -0.89
CLK4-214ENST00000611575 PIP4K2AP48426 406 aaPredicted RBP9.51□□□□□ -0.89
CLK4-214ENST00000611575 MAP2K1Q02750 393 aaPredicted RBP9.51□□□□□ -0.89
CLK4-214ENST00000611575 HLFQ16534 295 aa9.51□□□□□ -0.89
CLK4-214ENST00000611575 DEFB115Q30KQ5 88 aa9.51□□□□□ -0.89
CLK4-214ENST00000611575 MAP1SQ66K74 1059 aaPredicted RBP9.51□□□□□ -0.89
CLK4-214ENST00000611575 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
CLK4-214ENST00000611575 ABHD8Q96I13 439 aa9.51□□□□□ -0.89
CLK4-214ENST00000611575 DDX21Q9NR30 783 aaKnown RBP eCLIP9.51□□□□□ -0.89
CLK4-214ENST00000611575 ZNF652Q9Y2D9 606 aa9.51□□□□□ -0.89
CLK4-214ENST00000611575 TNRC18O15417 2968 aaPredicted RBP9.5□□□□□ -0.89
CLK4-214ENST00000611575 ERVV-1B6SEH8 477 aa9.5□□□□□ -0.89
CLK4-214ENST00000611575 HTATSF1O43719 755 aaKnown RBP9.5□□□□□ -0.89
CLK4-214ENST00000611575 ALDH1B1P30837 517 aa9.5□□□□□ -0.89
CLK4-214ENST00000611575 PRKAR2BP31323 418 aa9.5□□□□□ -0.89
CLK4-214ENST00000611575 PBX2P40425 430 aa9.5□□□□□ -0.89
CLK4-214ENST00000611575 CC2D1BQ5T0F9 858 aaKnown RBP9.5□□□□□ -0.89
CLK4-214ENST00000611575 CST9Q5W186 159 aa9.5□□□□□ -0.89
CLK4-214ENST00000611575 CC2D2BQ6DHV5 1058 aa9.5□□□□□ -0.89
CLK4-214ENST00000611575 SYNE4Q8N205 404 aa9.5□□□□□ -0.89
CLK4-214ENST00000611575 AIDAQ96BJ3 306 aa9.5□□□□□ -0.89
CLK4-214ENST00000611575 NIP7Q9Y221 180 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLK4-214ENST00000611575 ZNF330Q9Y3S2 320 aaPredicted RBP9.5□□□□□ -0.89
CLK4-214ENST00000611575 CACNA1SQ13698 1873 aa9.49□□□□□ -0.89
CLK4-214ENST00000611575 MAP3K7O43318 606 aa9.49□□□□□ -0.89
CLK4-214ENST00000611575 FOSBP53539 338 aa9.49□□□□□ -0.89
CLK4-214ENST00000611575 GRIPAP1Q4V328 841 aa9.49□□□□□ -0.89
CLK4-214ENST00000611575 LRP10Q7Z4F1 713 aa9.49□□□□□ -0.89
CLK4-214ENST00000611575 SLC51AQ86UW1 340 aa9.49□□□□□ -0.89
CLK4-214ENST00000611575 FBXW7Q969H0 707 aa9.49□□□□□ -0.89
CLK4-214ENST00000611575 PGAP2Q9UHJ9 254 aa9.49□□□□□ -0.89
CLK4-214ENST00000611575 UBN2Q6ZU65 1347 aa9.49□□□□□ -0.89
CLK4-214ENST00000611575 U2SURPO15042 1029 aaKnown RBP9.48□□□□□ -0.89
CLK4-214ENST00000611575 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
CLK4-214ENST00000611575 EAPPQ56P03 285 aaPredicted RBP9.48□□□□□ -0.89
CLK4-214ENST00000611575 USP50Q70EL3 339 aaPredicted RBP9.48□□□□□ -0.89
CLK4-214ENST00000611575 MCM10Q7L590 875 aa9.48□□□□□ -0.89
CLK4-214ENST00000611575 HHIPL1Q96JK4 782 aa9.48□□□□□ -0.89
CLK4-214ENST00000611575 VPS33BQ9H267 617 aa9.48□□□□□ -0.89
CLK4-214ENST00000611575 TLL2Q9Y6L7 1015 aa9.48□□□□□ -0.89
CLK4-214ENST00000611575 LAMB4A4D0S4 1761 aa9.47□□□□□ -0.89
CLK4-214ENST00000611575 EPS15P42566 896 aa9.47□□□□□ -0.89
CLK4-214ENST00000611575 FMR1Q06787 632 aaKnown RBP eCLIP9.47□□□□□ -0.89
CLK4-214ENST00000611575 NPM2Q86SE8 214 aaKnown RBP9.47□□□□□ -0.89
CLK4-214ENST00000611575 ZNF34Q8IZ26 560 aa9.47□□□□□ -0.89
CLK4-214ENST00000611575 CAPNS2Q96L46 248 aa9.47□□□□□ -0.89
CLK4-214ENST00000611575 CRAMP1Q96RY5 1269 aa9.47□□□□□ -0.89
CLK4-214ENST00000611575 RTFDC1Q9BY42 306 aaPredicted RBP9.47□□□□□ -0.89
CLK4-214ENST00000611575 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
CLK4-214ENST00000611575 MAP3K15Q6ZN16 1313 aa9.47□□□□□ -0.89
CLK4-214ENST00000611575 NTSR2O95665 410 aa9.46□□□□□ -0.9
CLK4-214ENST00000611575 MAP2K2P36507 400 aa9.46□□□□□ -0.9
CLK4-214ENST00000611575 FAM161AQ3B820 660 aa9.46□□□□□ -0.9
CLK4-214ENST00000611575 SAPCD2Q86UD0 394 aa9.46□□□□□ -0.9
CLK4-214ENST00000611575 PARP9Q8IXQ6 854 aa9.46□□□□□ -0.9
CLK4-214ENST00000611575 NYXQ9GZU5 481 aa9.46□□□□□ -0.9
CLK4-214ENST00000611575 KDM3BQ7LBC6 1761 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 ARHGAP33O14559 1287 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 NPHP1O15259 732 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 ECE1P42892 770 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 PSEN2P49810 448 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 DCTN1Q14203 1278 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 TAF7Q15545 349 aaPredicted RBP9.45□□□□□ -0.9
CLK4-214ENST00000611575 SLC10A5Q5PT55 438 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 SUSD4Q5VX71 490 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 DMRTA1Q5VZB9 504 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 NUTM1Q86Y26 1132 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 JDP2Q8WYK2 163 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 GPRC5DQ9NZD1 345 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 ABT1Q9ULW3 272 aaKnown RBP9.45□□□□□ -0.9
CLK4-214ENST00000611575 CDHR2Q9BYE9 1310 aa9.45□□□□□ -0.9
CLK4-214ENST00000611575 TRAF5O00463 557 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 CA12O43570 354 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 PPP2R1AP30153 589 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 EIF6P56537 245 aaKnown RBP9.44□□□□□ -0.9
CLK4-214ENST00000611575 EIF4A1P60842 406 aaKnown RBP9.44□□□□□ -0.9
CLK4-214ENST00000611575 CYP4F22Q6NT55 531 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 TTLL7Q6ZT98 887 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 IL27Q8NEV9 243 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 GPR101Q96P66 508 aaPredicted RBP9.44□□□□□ -0.9
CLK4-214ENST00000611575 PLEKHF1Q96S99 279 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 ADARB2Q9NS39 739 aaKnown RBP9.44□□□□□ -0.9
CLK4-214ENST00000611575 ATP6V0A2Q9Y487 856 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 ERBB4Q15303 1308 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 DUOX1Q9NRD9 1551 aa9.44□□□□□ -0.9
CLK4-214ENST00000611575 HIRAP54198 1017 aaPredicted RBP9.43□□□□□ -0.9
CLK4-214ENST00000611575 CXCL9Q07325 125 aa9.43□□□□□ -0.9
CLK4-214ENST00000611575 GIGYF2Q6Y7W6 1299 aaKnown RBP9.43□□□□□ -0.9
CLK4-214ENST00000611575 RTF1Q92541 710 aaKnown RBP9.43□□□□□ -0.9
CLK4-214ENST00000611575 PCGF6Q9BYE7 350 aa9.43□□□□□ -0.9
CLK4-214ENST00000611575 FAM117AQ9C073 453 aa9.43□□□□□ -0.9
CLK4-214ENST00000611575 PPEF1O14829 653 aaPredicted RBP9.42□□□□□ -0.9
CLK4-214ENST00000611575 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms