RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
SNCA-212ENST00000611107 C6orf229H3BNL8 230 aa11.02□□□□□ -0.65
SNCA-212ENST00000611107 ITGBL1O95965 494 aaPredicted RBP11.02□□□□□ -0.65
SNCA-212ENST00000611107 EGFRP00533 1210 aa11.02□□□□□ -0.65
SNCA-212ENST00000611107 CT47B1P0C2W7 299 aaPredicted RBP11.02□□□□□ -0.65
SNCA-212ENST00000611107 NBPF7P0C2Y1 421 aaPredicted RBP11.02□□□□□ -0.65
SNCA-212ENST00000611107 GMPSP49915 693 aaPredicted RBP11.02□□□□□ -0.65
SNCA-212ENST00000611107 HIRAP54198 1017 aaPredicted RBP11.02□□□□□ -0.65
SNCA-212ENST00000611107 EIF6P56537 245 aaKnown RBP11.02□□□□□ -0.65
SNCA-212ENST00000611107 EAPPQ56P03 285 aaPredicted RBP11.02□□□□□ -0.65
SNCA-212ENST00000611107 SLC4A10Q6U841 1118 aa11.02□□□□□ -0.65
SNCA-212ENST00000611107 DLK2Q6UY11 383 aa11.02□□□□□ -0.65
SNCA-212ENST00000611107 GPC2Q8N158 579 aa11.02□□□□□ -0.65
SNCA-212ENST00000611107 SUCLG2Q96I99 432 aa11.02□□□□□ -0.65
SNCA-212ENST00000611107 ZNF594Q96JF6 807 aaPredicted RBP11.02□□□□□ -0.65
SNCA-212ENST00000611107 CHMP4AQ9BY43 222 aa11.02□□□□□ -0.65
SNCA-212ENST00000611107 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
SNCA-212ENST00000611107 HACL1Q9UJ83 578 aa11.02□□□□□ -0.65
SNCA-212ENST00000611107 ZNRF3Q9ULT6 936 aa11.02□□□□□ -0.65
SNCA-212ENST00000611107 PSMD14O00487 310 aa11.01□□□□□ -0.65
SNCA-212ENST00000611107 ITGA6P23229 1130 aa11.01□□□□□ -0.65
SNCA-212ENST00000611107 GRIPAP1Q4V328 841 aa11.01□□□□□ -0.65
SNCA-212ENST00000611107 MAP1SQ66K74 1059 aaPredicted RBP11.01□□□□□ -0.65
SNCA-212ENST00000611107 CHADLQ6NUI6 762 aa11.01□□□□□ -0.65
SNCA-212ENST00000611107 ANKRD18AQ8IVF6 992 aa11.01□□□□□ -0.65
SNCA-212ENST00000611107 TRPM4Q8TD43 1214 aa11.01□□□□□ -0.65
SNCA-212ENST00000611107 IRS2Q9Y4H2 1338 aa11.01□□□□□ -0.65
SNCA-212ENST00000611107 GRM8O00222 908 aa11□□□□□ -0.65
SNCA-212ENST00000611107 ECE2O60344 883 aa11□□□□□ -0.65
SNCA-212ENST00000611107 UFL1O94874 794 aa11□□□□□ -0.65
SNCA-212ENST00000611107 WASHC4Q2M389 1173 aa11□□□□□ -0.65
SNCA-212ENST00000611107 CIAPIN1Q6FI81 312 aa11□□□□□ -0.65
SNCA-212ENST00000611107 LMBR1LQ6UX01 489 aa11□□□□□ -0.65
SNCA-212ENST00000611107 TMC4Q7Z404 712 aa11□□□□□ -0.65
SNCA-212ENST00000611107 SUPT20HQ8NEM7 779 aa11□□□□□ -0.65
SNCA-212ENST00000611107 HELBQ8NG08 1087 aaPredicted RBP11□□□□□ -0.65
SNCA-212ENST00000611107 MXD3Q9BW11 206 aa11□□□□□ -0.65
SNCA-212ENST00000611107 BSDC1Q9NW68 430 aaPredicted RBP11□□□□□ -0.65
SNCA-212ENST00000611107 GPRC5DQ9NZD1 345 aa11□□□□□ -0.65
SNCA-212ENST00000611107 PASKQ96RG2 1323 aa11□□□□□ -0.65
SNCA-212ENST00000611107 APLP1P51693 650 aa10.99□□□□□ -0.65
SNCA-212ENST00000611107 ALDH1L2Q3SY69 923 aa10.99□□□□□ -0.65
SNCA-212ENST00000611107 ANKRD44Q8N8A2 993 aa10.99□□□□□ -0.65
SNCA-212ENST00000611107 PUS3Q9BZE2 481 aaKnown RBP10.99□□□□□ -0.65
SNCA-212ENST00000611107 SRCIN1Q9C0H9 1055 aa10.99□□□□□ -0.65
SNCA-212ENST00000611107 VPS33BQ9H267 617 aa10.99□□□□□ -0.65
SNCA-212ENST00000611107 SMC4Q9NTJ3 1288 aa10.99□□□□□ -0.65
SNCA-212ENST00000611107 ANKIB1Q9P2G1 1089 aa10.99□□□□□ -0.65
SNCA-212ENST00000611107 GGA1Q9UJY5 639 aa10.99□□□□□ -0.65
SNCA-212ENST00000611107 ASTN2O75129 1339 aaPredicted RBP10.99□□□□□ -0.65
SNCA-212ENST00000611107 TRPM7Q96QT4 1865 aa10.98□□□□□ -0.65
SNCA-212ENST00000611107 TRAF5O00463 557 aa10.98□□□□□ -0.65
SNCA-212ENST00000611107 TAF5LO75529 589 aa10.98□□□□□ -0.65
SNCA-212ENST00000611107 ALDH1L1O75891 902 aa10.98□□□□□ -0.65
SNCA-212ENST00000611107 RARSP54136 660 aaKnown RBP10.98□□□□□ -0.65
SNCA-212ENST00000611107 LDHDQ86WU2 507 aa10.98□□□□□ -0.65
SNCA-212ENST00000611107 USP44Q9H0E7 712 aa10.98□□□□□ -0.65
SNCA-212ENST00000611107 NOB1Q9ULX3 412 aaKnown RBP10.98□□□□□ -0.65
SNCA-212ENST00000611107 UTYO14607 1347 aa10.98□□□□□ -0.65
SNCA-212ENST00000611107 IQCA1LA6NCM1 817 aa10.97□□□□□ -0.65
SNCA-212ENST00000611107 BCAR3O75815 825 aa10.97□□□□□ -0.65
SNCA-212ENST00000611107 CCT4P50991 539 aaKnown RBP10.97□□□□□ -0.65
SNCA-212ENST00000611107 CHRNDQ07001 517 aa10.97□□□□□ -0.65
SNCA-212ENST00000611107 SAMD7Q7Z3H4 446 aa10.97□□□□□ -0.65
SNCA-212ENST00000611107 KLHDC4Q8TBB5 520 aa10.97□□□□□ -0.65
SNCA-212ENST00000611107 CDC5LQ99459 802 aaKnown RBP10.97□□□□□ -0.65
SNCA-212ENST00000611107 TMX4Q9H1E5 349 aaPredicted RBP10.97□□□□□ -0.65
SNCA-212ENST00000611107 BICC1Q9H694 974 aaKnown RBP10.97□□□□□ -0.65
SNCA-212ENST00000611107 CLEC11AQ9Y240 323 aa10.97□□□□□ -0.65
SNCA-212ENST00000611107 XDHP47989 1333 aa10.97□□□□□ -0.65
SNCA-212ENST00000611107 PCNTO95613 3336 aa10.96□□□□□ -0.65
SNCA-212ENST00000611107 PTPRCP08575 1304 aa10.96□□□□□ -0.65
SNCA-212ENST00000611107 KIF16BQ96L93 1317 aa10.96□□□□□ -0.65
SNCA-212ENST00000611107 ATP2B4P23634 1241 aa10.96□□□□□ -0.65
SNCA-212ENST00000611107 BRPF1P55201 1214 aaPredicted RBP10.96□□□□□ -0.65
SNCA-212ENST00000611107 MICALL2Q8IY33 904 aa10.96□□□□□ -0.65
SNCA-212ENST00000611107 CNTROBQ8N137 903 aa10.96□□□□□ -0.65
SNCA-212ENST00000611107 GMLQ99445 158 aa10.96□□□□□ -0.65
SNCA-212ENST00000611107 C9orf78Q9NZ63 289 aaPredicted RBP10.96□□□□□ -0.65
SNCA-212ENST00000611107 CNOT7Q9UIV1 285 aaKnown RBP10.96□□□□□ -0.65
SNCA-212ENST00000611107 CHMP3Q9Y3E7 222 aa10.96□□□□□ -0.65
SNCA-212ENST00000611107 MYH13Q9UKX3 1938 aa10.96□□□□□ -0.66
SNCA-212ENST00000611107 ANKRD18BA2A2Z9 1011 aa10.95□□□□□ -0.66
SNCA-212ENST00000611107 VIL1P09327 827 aaKnown RBP10.95□□□□□ -0.66
SNCA-212ENST00000611107 RABL6Q3YEC7 729 aaPredicted RBP10.95□□□□□ -0.66
SNCA-212ENST00000611107 TBC1D10BQ4KMP7 808 aaPredicted RBP10.95□□□□□ -0.66
SNCA-212ENST00000611107 LRRC24Q50LG9 513 aa10.95□□□□□ -0.66
SNCA-212ENST00000611107 CST9Q5W186 159 aa10.95□□□□□ -0.66
SNCA-212ENST00000611107 KLRG1Q96E93 195 aa10.95□□□□□ -0.66
SNCA-212ENST00000611107 GLIS2Q9BZE0 524 aaPredicted RBP10.95□□□□□ -0.66
SNCA-212ENST00000611107 ZC3H12CQ9C0D7 883 aaKnown RBP10.95□□□□□ -0.66
SNCA-212ENST00000611107 SCAF8Q9UPN6 1271 aaKnown RBP10.95□□□□□ -0.66
SNCA-212ENST00000611107 MED23Q9ULK4 1368 aa10.94□□□□□ -0.66
SNCA-212ENST00000611107 HSP90B1P14625 803 aaKnown RBP10.94□□□□□ -0.66
SNCA-212ENST00000611107 LMOD1P29536 600 aaPredicted RBP10.94□□□□□ -0.66
SNCA-212ENST00000611107 IGHMBP2P38935 993 aaKnown RBP10.94□□□□□ -0.66
SNCA-212ENST00000611107 RFX5P48382 616 aaPredicted RBP10.94□□□□□ -0.66
SNCA-212ENST00000611107 IFIT5Q13325 482 aaKnown RBP10.94□□□□□ -0.66
SNCA-212ENST00000611107 TNIP1Q15025 636 aa10.94□□□□□ -0.66
SNCA-212ENST00000611107 RBM26Q5T8P6 1007 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms