RNA–Protein interactions for RNA: ENST00000607607.5

LINC00240-204, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best) BASIC

Gene LINC00240, Length 5,607 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-204ENST00000607607 TMPOP42166 694 aaKnown RBP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 USP5P45974 858 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 KARSQ15046 597 aaKnown RBP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 CCDC158Q5M9N0 1113 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 LEKR1Q6ZMV7 388 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 C8orf58Q8NAV2 365 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 YIPF2Q9BWQ6 316 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 DCTPP1Q9H773 170 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 SF3A3Q12874 501 aaKnown RBP eCLIP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 EFCAB13Q8IY85 973 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 NOA1Q8NC60 698 aaKnown RBP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 TBC1D5Q92609 795 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 FMNL2Q96PY5 1086 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 CWC15Q9P013 229 aaKnown RBP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 TFR2Q9UP52 801 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 AGPSO00116 658 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 TLDC1Q6P9B6 456 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 TMEM139Q8IV31 216 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 SPDYE1Q8NFV5 336 aaPredicted RBP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 CCDC26Q8TAB7 109 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 GCC1Q96CN9 775 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 MEIS3Q99687 375 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 BAG1Q99933 345 aaPredicted RBP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 MRPL44Q9H9J2 332 aaKnown RBP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 SPG7Q9UQ90 795 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 CCDC9Q9Y3X0 531 aaKnown RBP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 ADGRB2O60241 1585 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 FAM83GA6ND36 823 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 RILPL2Q969X0 211 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 SNX14Q9Y5W7 946 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 SETD1AO15047 1707 aaKnown RBP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 PPP2R3AQ06190 1150 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 DCTN1Q14203 1278 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 NBPF9Q3BBW0 867 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 LARP1BQ659C4 914 aaKnown RBP6.58□□□□□ -1.36
LINC00240-204ENST00000607607 GBP6Q6ZN66 633 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 HOMER1Q86YM7 354 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 IFNKQ9P0W0 207 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 L1RE1Q9UN81 338 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 MAPK8IP1Q9UQF2 711 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 MRFAP1Q9Y605 127 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 ZNF518AQ6AHZ1 1483 aa6.58□□□□□ -1.36
LINC00240-204ENST00000607607 TTC21AQ8NDW8 1320 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 ZEB2O60315 1214 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 FUT4P22083 530 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 HNRNPMP52272 730 aaKnown RBP eCLIP6.57□□□□□ -1.36
LINC00240-204ENST00000607607 RBM43Q6ZSC3 357 aaKnown RBP6.57□□□□□ -1.36
LINC00240-204ENST00000607607 IGSF22Q8N9C0 903 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 AK7Q96M32 723 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 NLRP3Q96P20 1036 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 POLR3AO14802 1390 aaPredicted RBP6.57□□□□□ -1.36
LINC00240-204ENST00000607607 PREX1Q8TCU6 1659 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 ERVK-7P63135 1459 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 A0A087WUV0 522 aaPredicted RBP6.57□□□□□ -1.36
LINC00240-204ENST00000607607 TPM1P09493 284 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 GCFC2P16383 781 aaKnown RBP6.57□□□□□ -1.36
LINC00240-204ENST00000607607 MAP3K9P80192 1104 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 SF3A1Q15459 793 aaKnown RBP6.57□□□□□ -1.36
LINC00240-204ENST00000607607 DPCR1Q3MIW9 517 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 PHACTR3Q96KR7 559 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 NEDD4P46934 1319 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 CDC42BPAQ5VT25 1732 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 BIN1O00499 593 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 RNF40O75150 1001 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 VAMP4O75379 141 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 CHGBP05060 677 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 ETF1P62495 437 aaKnown RBP6.57□□□□□ -1.36
LINC00240-204ENST00000607607 CREBRFQ8IUR6 639 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 ARL10Q8N8L6 244 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 TPM3P06753 285 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 RAB27AP51159 221 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 CCDC102AQ96A19 550 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 ARFGAP3Q9NP61 516 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 TPCN1Q9ULQ1 816 aa6.57□□□□□ -1.36
LINC00240-204ENST00000607607 LRRC10BA6NIK2 292 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 BACH1O14867 736 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 ADCY2Q08462 1091 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 SLC39A6Q13433 755 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 CASP8Q14790 479 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 CDCA2Q69YH5 1023 aaPredicted RBP6.56□□□□□ -1.36
LINC00240-204ENST00000607607 CEP85Q6P2H3 762 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 MNS1Q8NEH6 495 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 INTS4Q96HW7 963 aaKnown RBP6.56□□□□□ -1.36
LINC00240-204ENST00000607607 INTS13Q9NVM9 706 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 NSD3Q9BZ95 1437 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 EFCAB8A8MWE9 144 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 COQ9O75208 318 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 TUBP50607 506 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 PDE1AP54750 535 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 LARP1Q6PKG0 1096 aaKnown RBP6.56□□□□□ -1.36
LINC00240-204ENST00000607607 TEX11Q8IYF3 940 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 OTUD6BQ8N6M0 293 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 EVC2Q86UK5 1308 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 KINO60870 393 aaKnown RBP6.56□□□□□ -1.36
LINC00240-204ENST00000607607 PTH1RQ03431 593 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 PROSER2Q86WR7 435 aaPredicted RBP6.56□□□□□ -1.36
LINC00240-204ENST00000607607 CLSTN2Q9H4D0 955 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 HYPKQ9NX55 129 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 CDHR2Q9BYE9 1310 aa6.56□□□□□ -1.36
LINC00240-204ENST00000607607 TTC37Q6PGP7 1564 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms