RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 JARID2Q92833 1246 aaPredicted RBP19.19■□□□□ 0.66
CTSA-216ENST00000607212 ABHD8Q96I13 439 aa19.19■□□□□ 0.66
CTSA-216ENST00000607212 PRKRIP1Q9H875 184 aaPredicted RBP19.19■□□□□ 0.66
CTSA-216ENST00000607212 CCDC152Q4G0S7 254 aa19.18■□□□□ 0.66
CTSA-216ENST00000607212 KRT26Q7Z3Y9 468 aa19.18■□□□□ 0.66
CTSA-216ENST00000607212 TBC1D16Q8TBP0 767 aa19.18■□□□□ 0.66
CTSA-216ENST00000607212 DPF2Q92785 391 aa19.18■□□□□ 0.66
CTSA-216ENST00000607212 DCPSQ96C86 337 aaKnown RBP19.18■□□□□ 0.66
CTSA-216ENST00000607212 SEC31BQ9NQW1 1179 aa19.18■□□□□ 0.66
CTSA-216ENST00000607212 PGAP2Q9UHJ9 254 aa19.18■□□□□ 0.66
CTSA-216ENST00000607212 POLR2AP24928 1970 aaKnown RBP19.18■□□□□ 0.66
CTSA-216ENST00000607212 RPS12P25398 132 aaKnown RBP19.17■□□□□ 0.66
CTSA-216ENST00000607212 HUNKP57058 714 aa19.17■□□□□ 0.66
CTSA-216ENST00000607212 TRIM28Q13263 835 aaKnown RBP19.17■□□□□ 0.66
CTSA-216ENST00000607212 CWC25Q9NXE8 425 aaPredicted RBP19.17■□□□□ 0.66
CTSA-216ENST00000607212 GGA1Q9UJY5 639 aa19.17■□□□□ 0.66
CTSA-216ENST00000607212 CCDC85CA6NKD9 419 aa19.16■□□□□ 0.66
CTSA-216ENST00000607212 CCDC30Q5VVM6 783 aa19.16■□□□□ 0.66
CTSA-216ENST00000607212 CHMP4AQ9BY43 222 aa19.16■□□□□ 0.66
CTSA-216ENST00000607212 KCNQ5Q9NR82 932 aa19.16■□□□□ 0.66
CTSA-216ENST00000607212 COL4A1P02462 1669 aa19.16■□□□□ 0.66
CTSA-216ENST00000607212 PDE8AO60658 829 aa19.15■□□□□ 0.66
CTSA-216ENST00000607212 ZNF853P0CG23 659 aa19.15■□□□□ 0.66
CTSA-216ENST00000607212 KIF4BQ2VIQ3 1234 aa19.15■□□□□ 0.66
CTSA-216ENST00000607212 DLK2Q6UY11 383 aa19.15■□□□□ 0.66
CTSA-216ENST00000607212 ANKRD18AQ8IVF6 992 aa19.15■□□□□ 0.66
CTSA-216ENST00000607212 C2orf69Q8N8R5 385 aa19.15■□□□□ 0.66
CTSA-216ENST00000607212 CCDC191Q8NCU4 936 aa19.15■□□□□ 0.66
CTSA-216ENST00000607212 HHIPL1Q96JK4 782 aa19.15■□□□□ 0.66
CTSA-216ENST00000607212 ADM5C9JUS6 153 aa19.14■□□□□ 0.65
CTSA-216ENST00000607212 CA12O43570 354 aa19.14■□□□□ 0.65
CTSA-216ENST00000607212 PCCAP05165 728 aaPredicted RBP19.14■□□□□ 0.65
CTSA-216ENST00000607212 BRPF1P55201 1214 aaPredicted RBP19.13■□□□□ 0.65
CTSA-216ENST00000607212 SULF1Q8IWU6 871 aa19.13■□□□□ 0.65
CTSA-216ENST00000607212 C8orf58Q8NAV2 365 aa19.13■□□□□ 0.65
CTSA-216ENST00000607212 METTL22Q9BUU2 404 aaPredicted RBP19.13■□□□□ 0.65
CTSA-216ENST00000607212 STK31Q9BXU1 1019 aa19.13■□□□□ 0.65
CTSA-216ENST00000607212 GBA2Q9HCG7 927 aaPredicted RBP19.13■□□□□ 0.65
CTSA-216ENST00000607212 MAP3K2Q9Y2U5 619 aa19.13■□□□□ 0.65
CTSA-216ENST00000607212 RTL9Q8NET4 1388 aa19.13■□□□□ 0.65
CTSA-216ENST00000607212 CASP8AP2Q9UKL3 1982 aa19.13■□□□□ 0.65
CTSA-216ENST00000607212 SPEF2Q9C093 1822 aa19.12■□□□□ 0.65
CTSA-216ENST00000607212 EGFRP00533 1210 aa19.12■□□□□ 0.65
CTSA-216ENST00000607212 NEXNQ0ZGT2 675 aa19.12■□□□□ 0.65
CTSA-216ENST00000607212 NOGQ13253 232 aa19.12■□□□□ 0.65
CTSA-216ENST00000607212 FBXW7Q969H0 707 aa19.12■□□□□ 0.65
CTSA-216ENST00000607212 GGA3Q9NZ52 723 aa19.12■□□□□ 0.65
CTSA-216ENST00000607212 SCN9AQ15858 1988 aa19.12■□□□□ 0.65
CTSA-216ENST00000607212 CDC5LQ99459 802 aaKnown RBP19.11■□□□□ 0.65
CTSA-216ENST00000607212 PODXL2Q9NZ53 605 aa19.11■□□□□ 0.65
CTSA-216ENST00000607212 XDHP47989 1333 aa19.1■□□□□ 0.65
CTSA-216ENST00000607212 VIL1P09327 827 aaKnown RBP19.1■□□□□ 0.65
CTSA-216ENST00000607212 ZNF157P51786 506 aaPredicted RBP19.1■□□□□ 0.65
CTSA-216ENST00000607212 RGMBQ6NW40 437 aa19.1■□□□□ 0.65
CTSA-216ENST00000607212 MYH3P11055 1940 aa19.1■□□□□ 0.65
CTSA-216ENST00000607212 ATP2B4P23634 1241 aa19.09■□□□□ 0.65
CTSA-216ENST00000607212 TSR2Q969E8 191 aaKnown RBP19.09■□□□□ 0.65
CTSA-216ENST00000607212 CTSWP56202 376 aa19.08■□□□□ 0.64
CTSA-216ENST00000607212 RSBN1LQ6PCB5 846 aaPredicted RBP19.08■□□□□ 0.64
CTSA-216ENST00000607212 KSR2Q6VAB6 950 aa19.08■□□□□ 0.64
CTSA-216ENST00000607212 TSPYL6Q8N831 410 aa19.08■□□□□ 0.64
CTSA-216ENST00000607212 CCDC102AQ96A19 550 aa19.08■□□□□ 0.64
CTSA-216ENST00000607212 ZIC5Q96T25 663 aa19.08■□□□□ 0.64
CTSA-216ENST00000607212 PI4KAP2A4QPH2 592 aa19.07■□□□□ 0.64
CTSA-216ENST00000607212 DGKZQ13574 1117 aa19.07■□□□□ 0.64
CTSA-216ENST00000607212 FAM161AQ3B820 660 aa19.07■□□□□ 0.64
CTSA-216ENST00000607212 ANGEL2Q5VTE6 544 aaKnown RBP19.07■□□□□ 0.64
CTSA-216ENST00000607212 PI4KAP1Q8N8J0 262 aa19.07■□□□□ 0.64
CTSA-216ENST00000607212 AGBL3Q8NEM8 1001 aa19.07■□□□□ 0.64
CTSA-216ENST00000607212 ASTN2O75129 1339 aaPredicted RBP19.06■□□□□ 0.64
CTSA-216ENST00000607212 SCARF1Q14162 830 aa19.06■□□□□ 0.64
CTSA-216ENST00000607212 CDCA5Q96FF9 252 aa19.06■□□□□ 0.64
CTSA-216ENST00000607212 MCOLN1Q9GZU1 580 aa19.06■□□□□ 0.64
CTSA-216ENST00000607212 PSME4Q14997 1843 aa19.06■□□□□ 0.64
CTSA-216ENST00000607212 AKAP11Q9UKA4 1901 aa19.06■□□□□ 0.64
CTSA-216ENST00000607212 USP17L3A6NCW0 530 aa19.05■□□□□ 0.64
CTSA-216ENST00000607212 USP17L4A6NCW7 530 aa19.05■□□□□ 0.64
CTSA-216ENST00000607212 USP17L8P0C7I0 530 aa19.05■□□□□ 0.64
CTSA-216ENST00000607212 IGHMBP2P38935 993 aaKnown RBP19.05■□□□□ 0.64
CTSA-216ENST00000607212 KIF23Q02241 960 aaPredicted RBP19.05■□□□□ 0.64
CTSA-216ENST00000607212 USP17L1Q7RTZ2 530 aa19.05■□□□□ 0.64
CTSA-216ENST00000607212 CWF19L2Q2TBE0 894 aaKnown RBP19.04■□□□□ 0.64
CTSA-216ENST00000607212 TWISTNBQ3B726 338 aaPredicted RBP19.04■□□□□ 0.64
CTSA-216ENST00000607212 GREM2Q9H772 168 aa19.04■□□□□ 0.64
CTSA-216ENST00000607212 MYOZ2Q9NPC6 264 aa19.04■□□□□ 0.64
CTSA-216ENST00000607212 IGKV5-2P06315 115 aa19.03■□□□□ 0.64
CTSA-216ENST00000607212 TTLL12Q14166 644 aaPredicted RBP19.03■□□□□ 0.64
CTSA-216ENST00000607212 UBE3BQ7Z3V4 1068 aa19.03■□□□□ 0.64
CTSA-216ENST00000607212 PODNQ7Z5L7 613 aa19.03■□□□□ 0.64
CTSA-216ENST00000607212 FAM155AB1AL88 458 aaPredicted RBP19.02■□□□□ 0.64
CTSA-216ENST00000607212 SLC4A2P04920 1241 aa19.02■□□□□ 0.64
CTSA-216ENST00000607212 ZNF280AP59817 542 aaPredicted RBP19.02■□□□□ 0.64
CTSA-216ENST00000607212 MLLT1Q03111 559 aaPredicted RBP19.02■□□□□ 0.64
CTSA-216ENST00000607212 OGFOD1Q8N543 542 aa19.02■□□□□ 0.64
CTSA-216ENST00000607212 TTLL11Q8NHH1 800 aa19.02■□□□□ 0.64
CTSA-216ENST00000607212 BSDC1Q9NW68 430 aaPredicted RBP19.02■□□□□ 0.64
CTSA-216ENST00000607212 MINPP1Q9UNW1 487 aa19.02■□□□□ 0.64
CTSA-216ENST00000607212 SCAF8Q9UPN6 1271 aaKnown RBP19.02■□□□□ 0.64
CTSA-216ENST00000607212 NEURL1BA8MQ27 555 aa19.01■□□□□ 0.63
CTSA-216ENST00000607212 TRPA1O75762 1119 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 560.4 ms