RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.37
CTSA-215ENST00000607187 RTFDC1Q9BY42 306 aaPredicted RBP12.71□□□□□ -0.37
CTSA-215ENST00000607187 RRAGCQ9HB90 399 aa12.71□□□□□ -0.37
CTSA-215ENST00000607187 COL4A5P29400 1685 aa12.7□□□□□ -0.38
CTSA-215ENST00000607187 SCN4AP35499 1836 aa12.7□□□□□ -0.38
CTSA-215ENST00000607187 F6X3S4 739 aa12.7□□□□□ -0.38
CTSA-215ENST00000607187 TOMM70O94826 608 aa12.7□□□□□ -0.38
CTSA-215ENST00000607187 CCDC152Q4G0S7 254 aa12.7□□□□□ -0.38
CTSA-215ENST00000607187 MFRPQ9BY79 579 aa12.7□□□□□ -0.38
CTSA-215ENST00000607187 LTBP1Q14766 1721 aa12.7□□□□□ -0.38
CTSA-215ENST00000607187 POTECB2RU33 542 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 FZD9O00144 591 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 VEGFAP15692 232 aaPredicted RBP12.69□□□□□ -0.38
CTSA-215ENST00000607187 CASP7P55210 303 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 CTSWP56202 376 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 RPS8P62241 208 aaKnown RBP12.69□□□□□ -0.38
CTSA-215ENST00000607187 BEND3Q5T5X7 828 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 DPP8Q6V1X1 898 aaPredicted RBP12.69□□□□□ -0.38
CTSA-215ENST00000607187 UBE3BQ7Z3V4 1068 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 MPNDQ8N594 471 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
CTSA-215ENST00000607187 JDP2Q8WYK2 163 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 VPS33BQ9H267 617 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 SEC31BQ9NQW1 1179 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 SPEF2Q9C093 1822 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 DUOX1Q9NRD9 1551 aa12.69□□□□□ -0.38
CTSA-215ENST00000607187 DDNO94850 711 aaPredicted RBP12.68□□□□□ -0.38
CTSA-215ENST00000607187 LARGE2Q8N3Y3 721 aa12.68□□□□□ -0.38
CTSA-215ENST00000607187 SUPT20HQ8NEM7 779 aa12.68□□□□□ -0.38
CTSA-215ENST00000607187 TTLL11Q8NHH1 800 aa12.68□□□□□ -0.38
CTSA-215ENST00000607187 SSH1Q8WYL5 1049 aa12.68□□□□□ -0.38
CTSA-215ENST00000607187 PLA2G12BQ9BX93 195 aa12.68□□□□□ -0.38
CTSA-215ENST00000607187 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
CTSA-215ENST00000607187 ZNF541Q9H0D2 1346 aa12.67□□□□□ -0.38
CTSA-215ENST00000607187 PPIP5K2O43314 1243 aa12.67□□□□□ -0.38
CTSA-215ENST00000607187 CT47B1P0C2W7 299 aaPredicted RBP12.67□□□□□ -0.38
CTSA-215ENST00000607187 E2F4Q16254 413 aa12.67□□□□□ -0.38
CTSA-215ENST00000607187 C16orf71Q8IYS4 520 aaPredicted RBP12.67□□□□□ -0.38
CTSA-215ENST00000607187 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
CTSA-215ENST00000607187 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
CTSA-215ENST00000607187 CCDC85AQ96PX6 553 aaPredicted RBP12.67□□□□□ -0.38
CTSA-215ENST00000607187 RTL9Q8NET4 1388 aa12.67□□□□□ -0.38
CTSA-215ENST00000607187 PTPRCP08575 1304 aa12.66□□□□□ -0.38
CTSA-215ENST00000607187 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
CTSA-215ENST00000607187 AOC3Q16853 763 aa12.66□□□□□ -0.38
CTSA-215ENST00000607187 ALDH1L2Q3SY69 923 aa12.66□□□□□ -0.38
CTSA-215ENST00000607187 GREM2Q9H772 168 aa12.66□□□□□ -0.38
CTSA-215ENST00000607187 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
CTSA-215ENST00000607187 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
CTSA-215ENST00000607187 SEMA3EO15041 775 aa12.65□□□□□ -0.38
CTSA-215ENST00000607187 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
CTSA-215ENST00000607187 EIF6P56537 245 aaKnown RBP12.65□□□□□ -0.38
CTSA-215ENST00000607187 GPSM2P81274 684 aa12.65□□□□□ -0.38
CTSA-215ENST00000607187 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
CTSA-215ENST00000607187 KIAA2012Q0VF49 1180 aa12.65□□□□□ -0.38
CTSA-215ENST00000607187 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.38
CTSA-215ENST00000607187 NIM1KQ8IY84 436 aa12.65□□□□□ -0.38
CTSA-215ENST00000607187 GPC2Q8N158 579 aa12.65□□□□□ -0.38
CTSA-215ENST00000607187 CDC5LQ99459 802 aaKnown RBP12.65□□□□□ -0.38
CTSA-215ENST00000607187 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
CTSA-215ENST00000607187 NSFL1CQ9UNZ2 370 aaKnown RBP12.65□□□□□ -0.38
CTSA-215ENST00000607187 IQCA1LA6NCM1 817 aa12.64□□□□□ -0.39
CTSA-215ENST00000607187 GRM8O00222 908 aa12.64□□□□□ -0.39
CTSA-215ENST00000607187 CSF1RP07333 972 aa12.64□□□□□ -0.39
CTSA-215ENST00000607187 FSTL1Q12841 308 aa12.64□□□□□ -0.39
CTSA-215ENST00000607187 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
CTSA-215ENST00000607187 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
CTSA-215ENST00000607187 SRCIN1Q9C0H9 1055 aa12.64□□□□□ -0.39
CTSA-215ENST00000607187 PODXL2Q9NZ53 605 aa12.64□□□□□ -0.39
CTSA-215ENST00000607187 POLLQ9UGP5 575 aa12.64□□□□□ -0.39
CTSA-215ENST00000607187 HSPA6P17066 643 aa12.63□□□□□ -0.39
CTSA-215ENST00000607187 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
CTSA-215ENST00000607187 TBC1D16Q8TBP0 767 aa12.63□□□□□ -0.39
CTSA-215ENST00000607187 SMC4Q9NTJ3 1288 aa12.63□□□□□ -0.39
CTSA-215ENST00000607187 BSDC1Q9NW68 430 aaPredicted RBP12.63□□□□□ -0.39
CTSA-215ENST00000607187 ZNRF3Q9ULT6 936 aa12.63□□□□□ -0.39
CTSA-215ENST00000607187 PCNTO95613 3336 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 SCN9AQ15858 1988 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 C6orf229H3BNL8 230 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 PPP1R37O75864 691 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 ITGA6P23229 1130 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 FOXO4P98177 505 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 WASHC4Q2M389 1173 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 FAM161AQ3B820 660 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 SMC1BQ8NDV3 1235 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 TAF1DQ9H5J8 278 aaPredicted RBP12.62□□□□□ -0.39
CTSA-215ENST00000607187 C9orf78Q9NZ63 289 aaPredicted RBP12.62□□□□□ -0.39
CTSA-215ENST00000607187 ANKIB1Q9P2G1 1089 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 UTYO14607 1347 aa12.62□□□□□ -0.39
CTSA-215ENST00000607187 PSME4Q14997 1843 aa12.61□□□□□ -0.39
CTSA-215ENST00000607187 PSEN1P49768 467 aa12.61□□□□□ -0.39
CTSA-215ENST00000607187 CXCL9Q07325 125 aa12.61□□□□□ -0.39
CTSA-215ENST00000607187 EYA3Q99504 573 aa12.61□□□□□ -0.39
CTSA-215ENST00000607187 HACL1Q9UJ83 578 aa12.61□□□□□ -0.39
CTSA-215ENST00000607187 GGA1Q9UJY5 639 aa12.61□□□□□ -0.39
CTSA-215ENST00000607187 MINPP1Q9UNW1 487 aa12.61□□□□□ -0.39
CTSA-215ENST00000607187 GJA3Q9Y6H8 435 aa12.61□□□□□ -0.39
CTSA-215ENST00000607187 A0A1B0GUL6 1792 aa12.61□□□□□ -0.39
CTSA-215ENST00000607187 ADAMTSL1Q8N6G6 1762 aa12.61□□□□□ -0.39
CTSA-215ENST00000607187 XDHP47989 1333 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms