RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 FAM89AQ96GI7 184 aa19.6■□□□□ 0.73
SSBP4-214ENST00000607020 PDE4DIPQ5VU43 2346 aa19.59■□□□□ 0.73
SSBP4-214ENST00000607020 TMPOP42166 694 aaKnown RBP19.59■□□□□ 0.73
SSBP4-214ENST00000607020 SOX10P56693 466 aa19.59■□□□□ 0.73
SSBP4-214ENST00000607020 ZC3H12CQ9C0D7 883 aaKnown RBP19.59■□□□□ 0.73
SSBP4-214ENST00000607020 GGA3Q9NZ52 723 aa19.59■□□□□ 0.73
SSBP4-214ENST00000607020 TNRC18O15417 2968 aaPredicted RBP19.59■□□□□ 0.73
SSBP4-214ENST00000607020 PKN2Q16513 984 aaKnown RBP19.58■□□□□ 0.72
SSBP4-214ENST00000607020 PRPF38BQ5VTL8 546 aaKnown RBP19.58■□□□□ 0.72
SSBP4-214ENST00000607020 AGBL3Q8NEM8 1001 aa19.58■□□□□ 0.72
SSBP4-214ENST00000607020 CDCA5Q96FF9 252 aa19.58■□□□□ 0.72
SSBP4-214ENST00000607020 ZNF609O15014 1411 aa19.58■□□□□ 0.72
SSBP4-214ENST00000607020 ANKRD36CQ5JPF3 1778 aa19.57■□□□□ 0.72
SSBP4-214ENST00000607020 HOXB7P09629 217 aa19.57■□□□□ 0.72
SSBP4-214ENST00000607020 CHPF2Q9P2E5 772 aa19.57■□□□□ 0.72
SSBP4-214ENST00000607020 RASAL3Q86YV0 1011 aa19.56■□□□□ 0.72
SSBP4-214ENST00000607020 DBF4Q9UBU7 674 aaPredicted RBP19.56■□□□□ 0.72
SSBP4-214ENST00000607020 ASTN2O75129 1339 aaPredicted RBP19.55■□□□□ 0.72
SSBP4-214ENST00000607020 LRRC37AA6NMS7 1700 aa19.55■□□□□ 0.72
SSBP4-214ENST00000607020 ATP5J2-PTCD1G3V325 749 aa19.55■□□□□ 0.72
SSBP4-214ENST00000607020 IRS4O14654 1257 aaPredicted RBP19.55■□□□□ 0.72
SSBP4-214ENST00000607020 SCARF1Q14162 830 aa19.55■□□□□ 0.72
SSBP4-214ENST00000607020 KRT24Q2M2I5 525 aa19.55■□□□□ 0.72
SSBP4-214ENST00000607020 GMLQ99445 158 aa19.55■□□□□ 0.72
SSBP4-214ENST00000607020 DLG5Q8TDM6 1919 aa19.55■□□□□ 0.72
SSBP4-214ENST00000607020 PITPNM2Q9BZ72 1349 aa19.54■□□□□ 0.72
SSBP4-214ENST00000607020 HSP90B1P14625 803 aaKnown RBP19.54■□□□□ 0.72
SSBP4-214ENST00000607020 NOM1Q5C9Z4 860 aaKnown RBP19.54■□□□□ 0.72
SSBP4-214ENST00000607020 RSBN1LQ6PCB5 846 aaPredicted RBP19.54■□□□□ 0.72
SSBP4-214ENST00000607020 HPS5Q9UPZ3 1129 aa19.54■□□□□ 0.72
SSBP4-214ENST00000607020 HDGFL1Q5TGJ6 251 aa19.53■□□□□ 0.72
SSBP4-214ENST00000607020 ANGEL2Q5VTE6 544 aaKnown RBP19.53■□□□□ 0.72
SSBP4-214ENST00000607020 ZBTB38Q8NAP3 1195 aaPredicted RBP19.53■□□□□ 0.72
SSBP4-214ENST00000607020 HYPKQ9NX55 129 aa19.53■□□□□ 0.72
SSBP4-214ENST00000607020 GGA1Q9UJY5 639 aa19.53■□□□□ 0.72
SSBP4-214ENST00000607020 ZNF428Q96B54 188 aa19.52■□□□□ 0.72
SSBP4-214ENST00000607020 G3V3G9 751 aa19.51■□□□□ 0.71
SSBP4-214ENST00000607020 UFL1O94874 794 aa19.51■□□□□ 0.71
SSBP4-214ENST00000607020 USP17L8P0C7I0 530 aa19.51■□□□□ 0.71
SSBP4-214ENST00000607020 TM4SF4P48230 202 aa19.51■□□□□ 0.71
SSBP4-214ENST00000607020 DCAF8Q5TAQ9 597 aa19.51■□□□□ 0.71
SSBP4-214ENST00000607020 ANKIB1Q9P2G1 1089 aa19.51■□□□□ 0.71
SSBP4-214ENST00000607020 LAMB2P55268 1798 aa19.51■□□□□ 0.71
SSBP4-214ENST00000607020 PODNQ7Z5L7 613 aa19.5■□□□□ 0.71
SSBP4-214ENST00000607020 MYOZ2Q9NPC6 264 aa19.5■□□□□ 0.71
SSBP4-214ENST00000607020 SEC31BQ9NQW1 1179 aa19.5■□□□□ 0.71
SSBP4-214ENST00000607020 RTL5Q5HYW3 569 aaPredicted RBP19.49■□□□□ 0.71
SSBP4-214ENST00000607020 ZNF296Q8WUU4 475 aaPredicted RBP19.49■□□□□ 0.71
SSBP4-214ENST00000607020 TRIM35Q9UPQ4 493 aa19.49■□□□□ 0.71
SSBP4-214ENST00000607020 CFHR5Q9BXR6 569 aa19.48■□□□□ 0.71
SSBP4-214ENST00000607020 HDAC9Q9UKV0 1011 aa19.48■□□□□ 0.71
SSBP4-214ENST00000607020 USP17L3A6NCW0 530 aa19.47■□□□□ 0.71
SSBP4-214ENST00000607020 USP17L4A6NCW7 530 aa19.47■□□□□ 0.71
SSBP4-214ENST00000607020 ATP2B4P23634 1241 aa19.47■□□□□ 0.71
SSBP4-214ENST00000607020 RALBP1Q15311 655 aa19.47■□□□□ 0.71
SSBP4-214ENST00000607020 CCDC152Q4G0S7 254 aa19.47■□□□□ 0.71
SSBP4-214ENST00000607020 USP17L1Q7RTZ2 530 aa19.47■□□□□ 0.71
SSBP4-214ENST00000607020 COL4A1P02462 1669 aa19.46■□□□□ 0.71
SSBP4-214ENST00000607020 UBE2Q2LH0YL09 131 aa19.46■□□□□ 0.71
SSBP4-214ENST00000607020 GPR25O00155 361 aa19.46■□□□□ 0.71
SSBP4-214ENST00000607020 TBC1D8O95759 1140 aa19.46■□□□□ 0.71
SSBP4-214ENST00000607020 PCCAP05165 728 aaPredicted RBP19.46■□□□□ 0.71
SSBP4-214ENST00000607020 MMP14P50281 582 aa19.46■□□□□ 0.71
SSBP4-214ENST00000607020 DUSP27Q5VZP5 1158 aa19.46■□□□□ 0.71
SSBP4-214ENST00000607020 MOB2Q70IA6 237 aa19.46■□□□□ 0.71
SSBP4-214ENST00000607020 CCDC191Q8NCU4 936 aa19.46■□□□□ 0.71
SSBP4-214ENST00000607020 LAS1LQ9Y4W2 734 aaKnown RBP19.46■□□□□ 0.71
SSBP4-214ENST00000607020 XDHP47989 1333 aa19.46■□□□□ 0.71
SSBP4-214ENST00000607020 PDE8AO60658 829 aa19.45■□□□□ 0.7
SSBP4-214ENST00000607020 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
SSBP4-214ENST00000607020 FBXO46Q6PJ61 603 aaPredicted RBP19.45■□□□□ 0.7
SSBP4-214ENST00000607020 RIC3Q7Z5B4 369 aa19.45■□□□□ 0.7
SSBP4-214ENST00000607020 TAF1P21675 1872 aa19.44■□□□□ 0.7
SSBP4-214ENST00000607020 DDX60Q8IY21 1712 aaKnown RBP19.44■□□□□ 0.7
SSBP4-214ENST00000607020 PAPPA2Q9BXP8 1791 aa19.43■□□□□ 0.7
SSBP4-214ENST00000607020 GOLGA2Q08379 1002 aa19.43■□□□□ 0.7
SSBP4-214ENST00000607020 ANKRD18AQ8IVF6 992 aa19.43■□□□□ 0.7
SSBP4-214ENST00000607020 RUNDC1Q96C34 613 aa19.43■□□□□ 0.7
SSBP4-214ENST00000607020 SREBF2Q12772 1141 aa19.42■□□□□ 0.7
SSBP4-214ENST00000607020 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
SSBP4-214ENST00000607020 POLR2AP24928 1970 aaKnown RBP19.42■□□□□ 0.7
SSBP4-214ENST00000607020 WNT10BO00744 389 aa19.41■□□□□ 0.7
SSBP4-214ENST00000607020 ZNF853P0CG23 659 aa19.41■□□□□ 0.7
SSBP4-214ENST00000607020 NF2P35240 595 aa19.41■□□□□ 0.7
SSBP4-214ENST00000607020 DACT2Q5SW24 774 aa19.41■□□□□ 0.7
SSBP4-214ENST00000607020 PRAMEF18Q5VWM3 479 aa19.41■□□□□ 0.7
SSBP4-214ENST00000607020 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
SSBP4-214ENST00000607020 OGFOD1Q8N543 542 aa19.41■□□□□ 0.7
SSBP4-214ENST00000607020 GCC1Q96CN9 775 aa19.41■□□□□ 0.7
SSBP4-214ENST00000607020 CWC25Q9NXE8 425 aaPredicted RBP19.41■□□□□ 0.7
SSBP4-214ENST00000607020 FKTNO75072 461 aa19.4■□□□□ 0.7
SSBP4-214ENST00000607020 LDLRAD1Q5T700 205 aa19.4■□□□□ 0.7
SSBP4-214ENST00000607020 STRIP1Q5VSL9 837 aa19.4■□□□□ 0.7
SSBP4-214ENST00000607020 MYD88Q99836 296 aa19.4■□□□□ 0.7
SSBP4-214ENST00000607020 PHAXQ9H814 394 aaKnown RBP19.4■□□□□ 0.7
SSBP4-214ENST00000607020 MBIPQ9NS73 344 aa19.4■□□□□ 0.7
SSBP4-214ENST00000607020 BSDC1Q9NW68 430 aaPredicted RBP19.4■□□□□ 0.7
SSBP4-214ENST00000607020 SCAF8Q9UPN6 1271 aaKnown RBP19.4■□□□□ 0.7
SSBP4-214ENST00000607020 SCN9AQ15858 1988 aa19.4■□□□□ 0.7
SSBP4-214ENST00000607020 MYO3BQ8WXR4 1341 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms