RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 GGA1Q9UJY5 639 aa9.31□□□□□ -0.92
CUX2P1-201ENST00000606426 MINPP1Q9UNW1 487 aa9.31□□□□□ -0.92
CUX2P1-201ENST00000606426 NSFL1CQ9UNZ2 370 aaKnown RBP9.31□□□□□ -0.92
CUX2P1-201ENST00000606426 LEMD3Q9Y2U8 911 aa9.31□□□□□ -0.92
CUX2P1-201ENST00000606426 MYH3P11055 1940 aa9.31□□□□□ -0.92
CUX2P1-201ENST00000606426 EYA2O00167 538 aa9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 LMNB1P20700 586 aa9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 IL15P40933 162 aaPredicted RBP9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 KCNJ4P48050 445 aa9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 GPSM2P81274 684 aa9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 PTPN12Q05209 780 aaKnown RBP9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 CHRNDQ07001 517 aa9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 POLA2Q14181 598 aa9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 HSP90AB4PQ58FF6 505 aa9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 SSH3Q8TE77 659 aa9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 C1orf115Q9H7X2 142 aa9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 ARFGEF1Q9Y6D6 1849 aa9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 ZC3H4Q9UPT8 1303 aaKnown RBP9.3□□□□□ -0.92
CUX2P1-201ENST00000606426 SLX4Q8IY92 1834 aa9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 C6orf229H3BNL8 230 aa9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 NFKBIEO00221 500 aa9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 G3BP1Q13283 466 aaKnown RBP eCLIP9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 METTL24Q5JXM2 366 aa9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 TBC1D16Q8TBP0 767 aa9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 ZNF594Q96JF6 807 aaPredicted RBP9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 CRBNQ96SW2 442 aa9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 ZC3H12CQ9C0D7 883 aaKnown RBP9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 RIPOR2Q9Y4F9 1068 aa9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 SNED1Q8TER0 1413 aa9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 GOLGB1Q14789 3259 aaKnown RBP9.29□□□□□ -0.92
CUX2P1-201ENST00000606426 PNMA6EA0A0J9YXQ4 647 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 UFL1O94874 794 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 PDE8BO95263 885 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 IARSP41252 1262 aaKnown RBP9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 KIAA2012Q0VF49 1180 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 UBE4AQ14139 1066 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 WASHC4Q2M389 1173 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 OLFM4Q6UX06 510 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 ERC1Q8IUD2 1116 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 JDP2Q8WYK2 163 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 CEP126Q9P2H0 1117 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 AKAP2Q9Y2D5 859 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 NOP58Q9Y2X3 529 aaKnown RBP9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 ZNF804BA4D1E1 1349 aa9.28□□□□□ -0.92
CUX2P1-201ENST00000606426 MED23Q9ULK4 1368 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 G3V3G9 751 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 PPIP5K2O43314 1243 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 SURF6O75683 361 aaKnown RBP9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 NEFLP07196 543 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 RASSF7Q02833 373 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 OS9Q13438 667 aaPredicted RBP9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 PUM3Q15397 648 aaKnown RBP9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 LRRC24Q50LG9 513 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 DCAF8Q5TAQ9 597 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 C9orf131Q5VYM1 1079 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 C15orf52Q6ZUT6 534 aaKnown RBP9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 NIM1KQ8IY84 436 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 LARGE2Q8N3Y3 721 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 KLHDC4Q8TBB5 520 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 PUS3Q9BZE2 481 aaKnown RBP9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 SIL1Q9H173 461 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 ZNF277Q9NRM2 450 aaPredicted RBP9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 RNF181Q9P0P0 153 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 POLLQ9UGP5 575 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 LRRC37AA6NMS7 1700 aa9.27□□□□□ -0.93
CUX2P1-201ENST00000606426 RAB11FIP3O75154 756 aa9.26□□□□□ -0.93
CUX2P1-201ENST00000606426 IFIT1P09914 478 aaKnown RBP9.26□□□□□ -0.93
CUX2P1-201ENST00000606426 CAVIN4Q5BKX8 364 aa9.26□□□□□ -0.93
CUX2P1-201ENST00000606426 ATG9AQ7Z3C6 839 aa9.26□□□□□ -0.93
CUX2P1-201ENST00000606426 LPIN2Q92539 896 aa9.26□□□□□ -0.93
CUX2P1-201ENST00000606426 PA2G4Q9UQ80 394 aaKnown RBP9.26□□□□□ -0.93
CUX2P1-201ENST00000606426 TAF5LO75529 589 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 SLC5A1P13866 664 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 EIF6P56537 245 aaKnown RBP9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 AOC3Q16853 763 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 DPY19L2Q6NUT2 758 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 ZNF804AQ7Z570 1209 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 PODNQ7Z5L7 613 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 VGLL2Q8N8G2 317 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 HELBQ8NG08 1087 aaPredicted RBP9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 EXOC6Q8TAG9 804 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 COA1Q9GZY4 146 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 RWDD1Q9H446 243 aaPredicted RBP9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 GPR108Q9NPR9 543 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 ZNRF3Q9ULT6 936 aa9.25□□□□□ -0.93
CUX2P1-201ENST00000606426 UTRNP46939 3433 aa9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 FER1L6Q2WGJ9 1857 aa9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 FZD9O00144 591 aa9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 RIMBP2O15034 1052 aa9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 HDAC1Q13547 482 aaPredicted RBP9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 TNIP1Q15025 636 aa9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 ATP2B3Q16720 1220 aa9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 VPS37DQ86XT2 251 aa9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 SIRT2Q8IXJ6 389 aa9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 GCC1Q96CN9 775 aa9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 KIF1BPQ96EK5 621 aa9.24□□□□□ -0.93
CUX2P1-201ENST00000606426 CACNA1SQ13698 1873 aa9.23□□□□□ -0.93
CUX2P1-201ENST00000606426 COL4A1P02462 1669 aa9.23□□□□□ -0.93
CUX2P1-201ENST00000606426 ZBTB22O15209 634 aa9.23□□□□□ -0.93
CUX2P1-201ENST00000606426 ECE2O60344 883 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms