RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 AIMP1Q12904 312 aaKnown RBP17.46■□□□□ 0.39
CTSA-212ENST00000606394 RBM26Q5T8P6 1007 aaKnown RBP17.46■□□□□ 0.39
CTSA-212ENST00000606394 NECTIN2Q92692 538 aa17.46■□□□□ 0.39
CTSA-212ENST00000606394 GGA3Q9NZ52 723 aa17.46■□□□□ 0.39
CTSA-212ENST00000606394 RIMBP2O15034 1052 aa17.45■□□□□ 0.38
CTSA-212ENST00000606394 RASAL3Q86YV0 1011 aa17.45■□□□□ 0.38
CTSA-212ENST00000606394 CELF1Q92879 486 aaKnown RBP17.45■□□□□ 0.38
CTSA-212ENST00000606394 CDCA5Q96FF9 252 aa17.45■□□□□ 0.38
CTSA-212ENST00000606394 ZC3H12CQ9C0D7 883 aaKnown RBP17.45■□□□□ 0.38
CTSA-212ENST00000606394 HPS5Q9UPZ3 1129 aa17.45■□□□□ 0.38
CTSA-212ENST00000606394 ZNF280AP59817 542 aaPredicted RBP17.44■□□□□ 0.38
CTSA-212ENST00000606394 GPSM2P81274 684 aa17.44■□□□□ 0.38
CTSA-212ENST00000606394 NOM1Q5C9Z4 860 aaKnown RBP17.44■□□□□ 0.38
CTSA-212ENST00000606394 AGBL3Q8NEM8 1001 aa17.44■□□□□ 0.38
CTSA-212ENST00000606394 TBC1D16Q8TBP0 767 aa17.44■□□□□ 0.38
CTSA-212ENST00000606394 KCNQ5Q9NR82 932 aa17.44■□□□□ 0.38
CTSA-212ENST00000606394 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
CTSA-212ENST00000606394 LMOD3Q0VAK6 560 aa17.43■□□□□ 0.38
CTSA-212ENST00000606394 DOK7Q18PE1 504 aa17.43■□□□□ 0.38
CTSA-212ENST00000606394 PLBD2Q8NHP8 589 aa17.43■□□□□ 0.38
CTSA-212ENST00000606394 PITPNM2Q9BZ72 1349 aa17.43■□□□□ 0.38
CTSA-212ENST00000606394 PAPPA2Q9BXP8 1791 aa17.43■□□□□ 0.38
CTSA-212ENST00000606394 RIPK4P57078 832 aa17.42■□□□□ 0.38
CTSA-212ENST00000606394 RPS8P62241 208 aaKnown RBP17.42■□□□□ 0.38
CTSA-212ENST00000606394 FAM89AQ96GI7 184 aa17.42■□□□□ 0.38
CTSA-212ENST00000606394 ISCA1Q9BUE6 129 aa17.42■□□□□ 0.38
CTSA-212ENST00000606394 SCN9AQ15858 1988 aa17.41■□□□□ 0.38
CTSA-212ENST00000606394 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
CTSA-212ENST00000606394 TRIM28Q13263 835 aaKnown RBP17.41■□□□□ 0.38
CTSA-212ENST00000606394 ANGEL2Q5VTE6 544 aaKnown RBP17.41■□□□□ 0.38
CTSA-212ENST00000606394 ANKRD13DQ6ZTN6 518 aa17.41■□□□□ 0.38
CTSA-212ENST00000606394 GCC1Q96CN9 775 aa17.41■□□□□ 0.38
CTSA-212ENST00000606394 HDAC9Q9UKV0 1011 aa17.41■□□□□ 0.38
CTSA-212ENST00000606394 G3V3G9 751 aa17.4■□□□□ 0.38
CTSA-212ENST00000606394 SCARF1Q14162 830 aa17.4■□□□□ 0.38
CTSA-212ENST00000606394 DCAF8Q5TAQ9 597 aa17.4■□□□□ 0.38
CTSA-212ENST00000606394 RSBN1LQ6PCB5 846 aaPredicted RBP17.4■□□□□ 0.38
CTSA-212ENST00000606394 HOXB7P09629 217 aa17.39■□□□□ 0.37
CTSA-212ENST00000606394 ZNF296Q8WUU4 475 aaPredicted RBP17.39■□□□□ 0.37
CTSA-212ENST00000606394 ASTN2O75129 1339 aaPredicted RBP17.39■□□□□ 0.37
CTSA-212ENST00000606394 IRS4O14654 1257 aaPredicted RBP17.38■□□□□ 0.37
CTSA-212ENST00000606394 USP17L8P0C7I0 530 aa17.38■□□□□ 0.37
CTSA-212ENST00000606394 TM4SF4P48230 202 aa17.38■□□□□ 0.37
CTSA-212ENST00000606394 FBXO46Q6PJ61 603 aaPredicted RBP17.38■□□□□ 0.37
CTSA-212ENST00000606394 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
CTSA-212ENST00000606394 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
CTSA-212ENST00000606394 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
CTSA-212ENST00000606394 DBF4Q9UBU7 674 aaPredicted RBP17.38■□□□□ 0.37
CTSA-212ENST00000606394 GGA1Q9UJY5 639 aa17.38■□□□□ 0.37
CTSA-212ENST00000606394 PSME4Q14997 1843 aa17.37■□□□□ 0.37
CTSA-212ENST00000606394 CHL1O00533 1208 aa17.37■□□□□ 0.37
CTSA-212ENST00000606394 UFL1O94874 794 aa17.37■□□□□ 0.37
CTSA-212ENST00000606394 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
CTSA-212ENST00000606394 GMLQ99445 158 aa17.37■□□□□ 0.37
CTSA-212ENST00000606394 CFHR5Q9BXR6 569 aa17.37■□□□□ 0.37
CTSA-212ENST00000606394 GPR25O00155 361 aa17.36■□□□□ 0.37
CTSA-212ENST00000606394 HDGFL1Q5TGJ6 251 aa17.36■□□□□ 0.37
CTSA-212ENST00000606394 PODNQ7Z5L7 613 aa17.36■□□□□ 0.37
CTSA-212ENST00000606394 HYPKQ9NX55 129 aa17.36■□□□□ 0.37
CTSA-212ENST00000606394 COL4A1P02462 1669 aa17.36■□□□□ 0.37
CTSA-212ENST00000606394 MKI67P46013 3256 aaKnown RBP17.35■□□□□ 0.37
CTSA-212ENST00000606394 ATP5J2-PTCD1G3V325 749 aa17.35■□□□□ 0.37
CTSA-212ENST00000606394 TBC1D8O95759 1140 aa17.35■□□□□ 0.37
CTSA-212ENST00000606394 SREBF2Q12772 1141 aa17.35■□□□□ 0.37
CTSA-212ENST00000606394 ZBTB38Q8NAP3 1195 aaPredicted RBP17.35■□□□□ 0.37
CTSA-212ENST00000606394 HTTP42858 3142 aa17.35■□□□□ 0.37
CTSA-212ENST00000606394 USP17L3A6NCW0 530 aa17.34■□□□□ 0.37
CTSA-212ENST00000606394 USP17L4A6NCW7 530 aa17.34■□□□□ 0.37
CTSA-212ENST00000606394 NF2P35240 595 aa17.34■□□□□ 0.37
CTSA-212ENST00000606394 MMP14P50281 582 aa17.34■□□□□ 0.37
CTSA-212ENST00000606394 USP17L1Q7RTZ2 530 aa17.34■□□□□ 0.37
CTSA-212ENST00000606394 XDHP47989 1333 aa17.33■□□□□ 0.36
CTSA-212ENST00000606394 UBE2Q2LH0YL09 131 aa17.33■□□□□ 0.36
CTSA-212ENST00000606394 CCDC152Q4G0S7 254 aa17.33■□□□□ 0.36
CTSA-212ENST00000606394 ZNF428Q96B54 188 aa17.33■□□□□ 0.36
CTSA-212ENST00000606394 FKTNO75072 461 aa17.32■□□□□ 0.36
CTSA-212ENST00000606394 KRT24Q2M2I5 525 aa17.32■□□□□ 0.36
CTSA-212ENST00000606394 RTL5Q5HYW3 569 aaPredicted RBP17.32■□□□□ 0.36
CTSA-212ENST00000606394 SEC31BQ9NQW1 1179 aa17.32■□□□□ 0.36
CTSA-212ENST00000606394 ALDH1A1P00352 501 aa17.31■□□□□ 0.36
CTSA-212ENST00000606394 ATP2B4P23634 1241 aa17.31■□□□□ 0.36
CTSA-212ENST00000606394 MOB2Q70IA6 237 aa17.31■□□□□ 0.36
CTSA-212ENST00000606394 OGFOD1Q8N543 542 aa17.31■□□□□ 0.36
CTSA-212ENST00000606394 CENPFP49454 3210 aa17.3■□□□□ 0.36
CTSA-212ENST00000606394 MYO3BQ8WXR4 1341 aa17.3■□□□□ 0.36
CTSA-212ENST00000606394 PDE8AO60658 829 aa17.3■□□□□ 0.36
CTSA-212ENST00000606394 TTLL12Q14166 644 aaPredicted RBP17.3■□□□□ 0.36
CTSA-212ENST00000606394 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
CTSA-212ENST00000606394 CCDC191Q8NCU4 936 aa17.3■□□□□ 0.36
CTSA-212ENST00000606394 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
CTSA-212ENST00000606394 GOLGA2Q08379 1002 aa17.29■□□□□ 0.36
CTSA-212ENST00000606394 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
CTSA-212ENST00000606394 ANKRD18AQ8IVF6 992 aa17.29■□□□□ 0.36
CTSA-212ENST00000606394 WNT10BO00744 389 aa17.28■□□□□ 0.36
CTSA-212ENST00000606394 PCCAP05165 728 aaPredicted RBP17.28■□□□□ 0.36
CTSA-212ENST00000606394 INHBEP58166 350 aa17.28■□□□□ 0.36
CTSA-212ENST00000606394 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
CTSA-212ENST00000606394 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
CTSA-212ENST00000606394 MED23Q9ULK4 1368 aa17.28■□□□□ 0.36
CTSA-212ENST00000606394 DACT2Q5SW24 774 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms