RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.44	□□□□□ -0.58
PAX6-231	ENST00000606377	SBNO2	Q9Y2G9	1366 aa		11.44	□□□□□ -0.58
PAX6-231	ENST00000606377	PPM1F	P49593	454 aa	Predicted RBP	11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	RBM25	P49756	843 aa	Known RBP	11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	TPTE2	Q6XPS3	522 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	UBE2H	P62256	183 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	C19orf44	Q9H6X5	657 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	ZSCAN22	P10073	491 aa	Predicted RBP	11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	STAT6	P42226	847 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	SYK	P43405	635 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	KRT24	Q2M2I5	525 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	TMTC2	Q8N394	836 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	TBC1D32	Q96NH3	1257 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	LRRC27	Q9C0I9	530 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	PTPRK	Q15262	1439 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	UNC13A	Q9UPW8	1703 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	TRIM47	Q96LD4	638 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	GBP3	Q9H0R5	595 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	NUP153	P49790	1475 aa	Known RBP	11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	PAFAH1B1	P43034	410 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	NOP2	P46087	812 aa	Known RBP	11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	NAPA	P54920	295 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	TFCP2	Q12800	502 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	PRPF4B	Q13523	1007 aa	Known RBP	11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	PLS1	Q14651	629 aa		11.43	□□□□□ -0.58
PAX6-231	ENST00000606377	ADCY5	O95622	1261 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	IFFO1	Q0D2I5	559 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	CHST3	Q7LGC8	479 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	ERMN	Q8TAM6	284 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	KAT6B	Q8WYB5	2073 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	NPAT	Q14207	1427 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	GC	P02774	474 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	RRAGB	Q5VZM2	374 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	PDCL2	Q8N4E4	241 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	TSPYL6	Q8N831	410 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	ECM2	O94769	699 aa	Predicted RBP	11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	CCDC91	Q7Z6B0	441 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	ALS2CR12	Q96Q35	445 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	HOXC9	P31274	260 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	GIMAP6	Q6P9H5	292 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	EYA1	Q99502	592 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	BTG4	Q9NY30	223 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	CNPY2	Q9Y2B0	182 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	MAP9	Q49MG5	647 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	CCDC174	Q6PII3	467 aa		11.42	□□□□□ -0.58
PAX6-231	ENST00000606377	ERICH4	A6NGS2	130 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	CALM1	P0DP23	149 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	CALM2	P0DP24	149 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	CALM3	P0DP25	149 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	ZNF165	P49910	485 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	C16orf45	Q96MC5	204 aa	Predicted RBP	11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	RNMT	O43148	476 aa	Known RBP	11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	SMARCC2	Q8TAQ2	1214 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	RMND1	Q9NWS8	449 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	PCDH11X	Q9BZA7	1347 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	PCDH11Y	Q9BZA8	1340 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	DCAF5	Q96JK2	942 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	BICC1	Q9H694	974 aa	Known RBP	11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	MCM9	Q9NXL9	1143 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	TNN	Q9UQP3	1299 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	NUP160	Q12769	1436 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	MARCKS	P29966	332 aa	Predicted RBP	11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	MAP2K1	Q02750	393 aa	Predicted RBP	11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	VTI1A	Q96AJ9	217 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	RNF113A	O15541	343 aa	Known RBP	11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	GSDMD	P57764	484 aa		11.41	□□□□□ -0.58
PAX6-231	ENST00000606377	CA8	P35219	290 aa		11.4	□□□□□ -0.58
PAX6-231	ENST00000606377	HSP90AA4P	Q58FG1	418 aa		11.4	□□□□□ -0.58
PAX6-231	ENST00000606377	HOOK3	Q86VS8	718 aa		11.4	□□□□□ -0.58
PAX6-231	ENST00000606377	LMTK3	Q96Q04	1460 aa		11.4	□□□□□ -0.58
PAX6-231	ENST00000606377	PPP4R3B	Q5MIZ7	849 aa		11.4	□□□□□ -0.58
PAX6-231	ENST00000606377	LINS1	Q8NG48	757 aa		11.4	□□□□□ -0.58
PAX6-231	ENST00000606377	GNPAT	O15228	680 aa		11.4	□□□□□ -0.58
PAX6-231	ENST00000606377	KCNA6	P17658	529 aa		11.4	□□□□□ -0.58
PAX6-231	ENST00000606377	GNAQ	P50148	359 aa		11.4	□□□□□ -0.58
PAX6-231	ENST00000606377	N4BP3	O15049	544 aa		11.4	□□□□□ -0.59
PAX6-231	ENST00000606377	POLD1	P28340	1107 aa		11.4	□□□□□ -0.59
PAX6-231	ENST00000606377	PHACTR3	Q96KR7	559 aa		11.4	□□□□□ -0.59
PAX6-231	ENST00000606377	MCM3	P25205	808 aa		11.39	□□□□□ -0.59
PAX6-231	ENST00000606377		A0A1W2PP64	1363 aa		11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	ZMYM3	Q14202	1370 aa		11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	ZSCAN23	Q3MJ62	389 aa		11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	CEP85	Q6P2H3	762 aa		11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	PEG3	Q9GZU2	1588 aa		11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	GNAT2	P19087	354 aa		11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	RRP36	Q96EU6	259 aa	Known RBP	11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	TRPM2	O94759	1503 aa		11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	LDHB	P07195	334 aa	Known RBP	11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	TRAPPC3L	Q5T215	181 aa		11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	KCNG4	Q8TDN1	519 aa		11.39	□□□□□ -0.59
PAX6-231	ENST00000606377	NEMF	O60524	1076 aa		11.38	□□□□□ -0.59
PAX6-231	ENST00000606377	IP6K1	Q92551	441 aa		11.38	□□□□□ -0.59
PAX6-231	ENST00000606377	TBC1D5	Q92609	795 aa		11.38	□□□□□ -0.59
PAX6-231	ENST00000606377	VAMP4	O75379	141 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms