RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 MORC2Q9Y6X9 1032 aaPredicted RBP7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 RPAP1Q9BWH6 1393 aaPredicted RBP7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 SLFN14P0C7P3 912 aa7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 KCNH2Q12809 1159 aa7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 TERF2Q15554 542 aa7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 NFE2L2Q16236 605 aa7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 TAF7LQ5H9L4 462 aa7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 RC3H1Q5TC82 1133 aaKnown RBP7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 CEP85Q6P2H3 762 aa7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 GIMAP6Q6P9H5 292 aa7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 KIF18AQ8NI77 898 aa7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 ESYT1Q9BSJ8 1104 aa7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.66□□□□□ -1.18
SRGAP2-211ENST00000604423 RTL1A6NKG5 1358 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 MSH6P52701 1360 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 ASXL2Q76L83 1435 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 WNT7AO00755 349 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 KIF3BO15066 747 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 ZSCAN22P10073 491 aaPredicted RBP7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 FAM193AP78312 1265 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 SRPK2P78362 688 aaKnown RBP7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 SLC20A2Q08357 652 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 LYPD8Q6UX82 237 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 TSPYL6Q8N831 410 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 FAM200AQ8TCP9 573 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 BAP1Q92560 729 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 ZNF592Q92610 1267 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 TOR4AQ9NXH8 423 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 TERF2IPQ9NYB0 399 aa7.65□□□□□ -1.18
SRGAP2-211ENST00000604423 TUBGCP6Q96RT7 1819 aa7.65□□□□□ -1.19
SRGAP2-211ENST00000604423 SH3BP2P78314 561 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 SKIV2LQ15477 1246 aaKnown RBP7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 SH3D19Q5HYK7 790 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 TMEM132EQ6IEE7 984 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 HELBQ8NG08 1087 aaPredicted RBP7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 UPF3BQ9BZI7 483 aaKnown RBP7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 C14orf93Q9H972 538 aaKnown RBP7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 MBIPQ9NS73 344 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 DLG5Q8TDM6 1919 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 CAMSAP1Q5T5Y3 1602 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 MROH1Q8NDA8 1641 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 J3QL48 77 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 ST8SIA5O15466 376 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 HTATSF1O43719 755 aaKnown RBP7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 STX6O43752 255 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 F13A1P00488 732 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 PDE1AP54750 535 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 CEP135Q66GS9 1140 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 EHBP1Q8NDI1 1231 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 RILPL2Q969X0 211 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 THUMPD2Q9BTF0 503 aaKnown RBP7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 FUCA2Q9BTY2 467 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 PALD1Q9ULE6 856 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 SMC3Q9UQE7 1217 aa7.64□□□□□ -1.19
SRGAP2-211ENST00000604423 CCDC171Q6TFL3 1326 aa7.63□□□□□ -1.19
SRGAP2-211ENST00000604423 RIMS2Q9UQ26 1411 aa7.63□□□□□ -1.19
SRGAP2-211ENST00000604423 MAP3K11Q16584 847 aa7.63□□□□□ -1.19
SRGAP2-211ENST00000604423 RNF20Q5VTR2 975 aa7.63□□□□□ -1.19
SRGAP2-211ENST00000604423 CCDC186Q7Z3E2 898 aa7.63□□□□□ -1.19
SRGAP2-211ENST00000604423 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.63□□□□□ -1.19
SRGAP2-211ENST00000604423 TRIM5Q9C035 493 aa7.63□□□□□ -1.19
SRGAP2-211ENST00000604423 OSBPL3Q9H4L5 887 aa7.63□□□□□ -1.19
SRGAP2-211ENST00000604423 DGAT1O75907 488 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 WNT7BP56706 349 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 TUSC1Q2TAM9 212 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 HDGFL2Q7Z4V5 671 aaPredicted RBP7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 AEBP1Q8IUX7 1158 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 NUP62CLQ9H1M0 184 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 ZCCHC11Q5TAX3 1644 aaKnown RBP7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 PNPLA6Q8IY17 1366 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 AP5Z1O43299 807 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 HMOX1P09601 288 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 CTDSPL2Q05D32 466 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 SAFB2Q14151 953 aaKnown RBP eCLIP7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 ERO1AQ96HE7 468 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 NOL10Q9BSC4 688 aaKnown RBP7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 PTPRCP08575 1304 aa7.62□□□□□ -1.19
SRGAP2-211ENST00000604423 GOLGA6L4A6NEF3 574 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 F12P00748 615 aaPredicted RBP7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 TYRO3Q06418 890 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 LRMPQ12912 555 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 PTPN14Q15678 1187 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 ZSCAN25Q6NSZ9 544 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 AFAP1Q8N556 730 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 C8orf58Q8NAV2 365 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 ZNF511Q8NB15 262 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 CLIP2Q9UDT6 1046 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 CFAP65Q6ZU64 1925 aaKnown RBP7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 ARAP3Q8WWN8 1544 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 CLTCQ00610 1675 aaKnown RBP7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 FYB1O15117 783 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 EPB41L2O43491 1005 aaKnown RBP7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 ALDH1A1P00352 501 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 SYT1P21579 422 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 CHMLP26374 656 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 SLFNL1Q499Z3 407 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 TEX35Q5T0J7 233 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 LUZP1Q86V48 1076 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms