RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 CALM1P0DP23 149 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 CALM2P0DP24 149 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 CALM3P0DP25 149 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 TCERG1LQ5VWI1 586 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 BICDL1Q6ZP65 573 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 LMBR1Q8WVP7 490 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 DNAJC25Q9H1X3 360 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 ZBTB40Q9NUA8 1239 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 ANKIB1Q9P2G1 1089 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 CTNNA2P26232 953 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 ITSN2Q9NZM3 1697 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 DNM1Q05193 864 aaKnown RBP24.04■■□□□ 1.44
SH3D19-211ENST00000604030 KSR2Q6VAB6 950 aa24.04■■□□□ 1.44
SH3D19-211ENST00000604030 GRM8O00222 908 aa24.03■■□□□ 1.44
SH3D19-211ENST00000604030 TUBB2AQ13885 445 aa24.03■■□□□ 1.44
SH3D19-211ENST00000604030 TBC1D5Q92609 795 aa24.03■■□□□ 1.44
SH3D19-211ENST00000604030 TUBB2BQ9BVA1 445 aa24.03■■□□□ 1.44
SH3D19-211ENST00000604030 KDM5BQ9UGL1 1544 aa24.03■■□□□ 1.44
SH3D19-211ENST00000604030 ARFGAP2Q8N6H7 521 aa24.03■■□□□ 1.44
SH3D19-211ENST00000604030 STAT6P42226 847 aa24.03■■□□□ 1.44
SH3D19-211ENST00000604030 DNA2P51530 1060 aa24.03■■□□□ 1.44
SH3D19-211ENST00000604030 Q6ZUG5 572 aa24.03■■□□□ 1.44
SH3D19-211ENST00000604030 PANK2Q9BZ23 570 aa24.03■■□□□ 1.44
SH3D19-211ENST00000604030 TERF1P54274 439 aa24.02■■□□□ 1.44
SH3D19-211ENST00000604030 HAND2P61296 217 aa24.02■■□□□ 1.44
SH3D19-211ENST00000604030 SPAG5Q96R06 1193 aa24.02■■□□□ 1.44
SH3D19-211ENST00000604030 FERMT1Q9BQL6 677 aa24.02■■□□□ 1.44
SH3D19-211ENST00000604030 V9GYY5 206 aaPredicted RBP24.02■■□□□ 1.44
SH3D19-211ENST00000604030 DENND4BO75064 1496 aaPredicted RBP24.02■■□□□ 1.44
SH3D19-211ENST00000604030 FAM83GA6ND36 823 aa24.02■■□□□ 1.44
SH3D19-211ENST00000604030 TBCAO75347 108 aaKnown RBP24.02■■□□□ 1.44
SH3D19-211ENST00000604030 TMX1Q9H3N1 280 aa24.02■■□□□ 1.44
SH3D19-211ENST00000604030 TTC12Q9H892 705 aaPredicted RBP24.01■■□□□ 1.43
SH3D19-211ENST00000604030 OGFRQ9NZT2 677 aa24.01■■□□□ 1.43
SH3D19-211ENST00000604030 CALML3P27482 149 aa24.01■■□□□ 1.43
SH3D19-211ENST00000604030 GNAT2P19087 354 aa24.01■■□□□ 1.43
SH3D19-211ENST00000604030 TSHZ3Q63HK5 1081 aa24.01■■□□□ 1.43
SH3D19-211ENST00000604030 CEP85Q6P2H3 762 aa24.01■■□□□ 1.43
SH3D19-211ENST00000604030 CCDC77Q9BR77 488 aa24.01■■□□□ 1.43
SH3D19-211ENST00000604030 ACEP12821 1306 aa24.01■■□□□ 1.43
SH3D19-211ENST00000604030 RTL9Q8NET4 1388 aa24.01■■□□□ 1.43
SH3D19-211ENST00000604030 BICDL2A1A5D9 508 aa24■■□□□ 1.43
SH3D19-211ENST00000604030 TRIM75PA6NK02 468 aa24■■□□□ 1.43
SH3D19-211ENST00000604030 ZGPATQ8N5A5 531 aaKnown RBP24■■□□□ 1.43
SH3D19-211ENST00000604030 ZBTB3Q9H5J0 574 aa24■■□□□ 1.43
SH3D19-211ENST00000604030 PPP1R2P41236 205 aa24■■□□□ 1.43
SH3D19-211ENST00000604030 LINS1Q8NG48 757 aa24■■□□□ 1.43
SH3D19-211ENST00000604030 PPM1EQ8WY54 764 aa24■■□□□ 1.43
SH3D19-211ENST00000604030 NPC1L1Q9UHC9 1359 aa24■■□□□ 1.43
SH3D19-211ENST00000604030 KIF5AQ12840 1032 aa23.99■■□□□ 1.43
SH3D19-211ENST00000604030 PRPF4BQ13523 1007 aaKnown RBP23.99■■□□□ 1.43
SH3D19-211ENST00000604030 FMNL3Q8IVF7 1028 aa23.99■■□□□ 1.43
SH3D19-211ENST00000604030 ZHX1Q9UKY1 873 aaPredicted RBP23.99■■□□□ 1.43
SH3D19-211ENST00000604030 FANCAO15360 1455 aa23.99■■□□□ 1.43
SH3D19-211ENST00000604030 MNAT1P51948 309 aa23.99■■□□□ 1.43
SH3D19-211ENST00000604030 DDX46Q7L014 1031 aaKnown RBP23.99■■□□□ 1.43
SH3D19-211ENST00000604030 TTC14Q96N46 770 aa23.99■■□□□ 1.43
SH3D19-211ENST00000604030 ZNF830Q96NB3 372 aaPredicted RBP23.99■■□□□ 1.43
SH3D19-211ENST00000604030 PRC1O43663 620 aa23.99■■□□□ 1.43
SH3D19-211ENST00000604030 ZMYND15Q9H091 742 aa23.99■■□□□ 1.43
SH3D19-211ENST00000604030 HLA-DOAP06340 250 aa23.99■■□□□ 1.43
SH3D19-211ENST00000604030 AOX1Q06278 1338 aa23.99■■□□□ 1.43
SH3D19-211ENST00000604030 USP26Q9BXU7 913 aa23.98■■□□□ 1.43
SH3D19-211ENST00000604030 ZSWIM4Q9H7M6 989 aa23.98■■□□□ 1.43
SH3D19-211ENST00000604030 SNRKQ9NRH2 765 aa23.98■■□□□ 1.43
SH3D19-211ENST00000604030 ACTN2P35609 894 aa23.98■■□□□ 1.43
SH3D19-211ENST00000604030 PLEKHM2Q8IWE5 1019 aa23.98■■□□□ 1.43
SH3D19-211ENST00000604030 AK2P54819 239 aa23.98■■□□□ 1.43
SH3D19-211ENST00000604030 UBE4AQ14139 1066 aa23.98■■□□□ 1.43
SH3D19-211ENST00000604030 MYO1BO43795 1136 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 VAMP4O75379 141 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 ATP2B3Q16720 1220 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 CCDC152Q4G0S7 254 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 AKAP4Q5JQC9 854 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 ISM2Q6H9L7 571 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 TCOF1Q13428 1488 aaKnown RBP23.97■■□□□ 1.43
SH3D19-211ENST00000604030 MACROD2A1Z1Q3 448 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 CCDC144CPQ8IYA2 1237 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 IFIT1BQ5T764 474 aaKnown RBP23.97■■□□□ 1.43
SH3D19-211ENST00000604030 RUFY3Q7L099 469 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 RPGRQ92834 1020 aaKnown RBP23.97■■□□□ 1.43
SH3D19-211ENST00000604030 ERO1AQ96HE7 468 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 CNGA4Q8IV77 575 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 SYCP3Q8IZU3 236 aa23.97■■□□□ 1.43
SH3D19-211ENST00000604030 C8orf58Q8NAV2 365 aa23.96■■□□□ 1.43
SH3D19-211ENST00000604030 LIG1P18858 919 aa23.96■■□□□ 1.43
SH3D19-211ENST00000604030 NMIQ13287 307 aaPredicted RBP23.96■■□□□ 1.43
SH3D19-211ENST00000604030 DHX32Q7L7V1 743 aaKnown RBP23.96■■□□□ 1.43
SH3D19-211ENST00000604030 NBPF11Q86T75 865 aa23.96■■□□□ 1.43
SH3D19-211ENST00000604030 CHPF2Q9P2E5 772 aa23.96■■□□□ 1.43
SH3D19-211ENST00000604030 SF3B2Q13435 895 aaKnown RBP23.96■■□□□ 1.43
SH3D19-211ENST00000604030 ANKS4BQ8N8V4 417 aa23.96■■□□□ 1.43
SH3D19-211ENST00000604030 FERMT2Q96AC1 680 aa23.96■■□□□ 1.43
SH3D19-211ENST00000604030 CHMLP26374 656 aa23.96■■□□□ 1.43
SH3D19-211ENST00000604030 CREB3L3Q68CJ9 461 aa23.96■■□□□ 1.43
SH3D19-211ENST00000604030 CCDC174Q6PII3 467 aa23.96■■□□□ 1.43
SH3D19-211ENST00000604030 IKBKGQ9Y6K9 419 aa23.96■■□□□ 1.43
SH3D19-211ENST00000604030 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
SH3D19-211ENST00000604030 MCM6Q14566 821 aa23.95■■□□□ 1.43
SH3D19-211ENST00000604030 UHRF1BP1Q6BDS2 1440 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms