RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 GBP4Q96PP9 640 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 TANGO6Q9C0B7 1094 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 MED4Q9NPJ6 270 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 BSDC1Q9NW68 430 aaPredicted RBP5.59□□□□□ -1.51
LINC01109-201ENST00000603837 CEP126Q9P2H0 1117 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 HDAC9Q9UKV0 1011 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 RABL2BQ9UNT1 228 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 PRSS47A8MTI9 375 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 ELL2O00472 640 aaPredicted RBP5.59□□□□□ -1.51
LINC01109-201ENST00000603837 SYCP2LQ5T4T6 812 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 IFFO2Q5TF58 517 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 CDC5LQ99459 802 aaKnown RBP5.59□□□□□ -1.51
LINC01109-201ENST00000603837 NOL10Q9BSC4 688 aaKnown RBP5.59□□□□□ -1.51
LINC01109-201ENST00000603837 C22orf23Q9BZE7 217 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 SLC6A16Q9GZN6 736 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 MRPL42Q9Y6G3 142 aaKnown RBP5.59□□□□□ -1.51
LINC01109-201ENST00000603837 MAGI2Q86UL8 1455 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 MIA2Q96PC5 1412 aa5.59□□□□□ -1.52
LINC01109-201ENST00000603837 IBTKQ9P2D0 1353 aaPredicted RBP5.59□□□□□ -1.52
LINC01109-201ENST00000603837 ADGBQ8N7X0 1667 aa5.59□□□□□ -1.52
LINC01109-201ENST00000603837 PSMD2Q13200 908 aa5.59□□□□□ -1.52
LINC01109-201ENST00000603837 FAM160A2Q8N612 972 aaPredicted RBP5.59□□□□□ -1.52
LINC01109-201ENST00000603837 CCDC34Q96HJ3 373 aa5.59□□□□□ -1.52
LINC01109-201ENST00000603837 DUSP9Q99956 384 aaKnown RBP5.59□□□□□ -1.52
LINC01109-201ENST00000603837 DDX41Q9UJV9 622 aaKnown RBP5.59□□□□□ -1.52
LINC01109-201ENST00000603837 COG6Q9Y2V7 657 aa5.59□□□□□ -1.52
LINC01109-201ENST00000603837 HMGB1P1B2RPK0 211 aaPredicted RBP5.58□□□□□ -1.52
LINC01109-201ENST00000603837 HIP1RO75146 1068 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 DHX8Q14562 1220 aaKnown RBP5.58□□□□□ -1.52
LINC01109-201ENST00000603837 CCDC91Q7Z6B0 441 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 KRT222Q8N1A0 295 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 CLASRPQ8N2M8 674 aaKnown RBP5.58□□□□□ -1.52
LINC01109-201ENST00000603837 PRR7Q8TB68 274 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 ITFG2Q969R8 447 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 PAIP2Q9BPZ3 127 aaKnown RBP5.58□□□□□ -1.52
LINC01109-201ENST00000603837 RRP7BPQ9NSQ0 103 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 SWAP70Q9UH65 585 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 TCEAL9Q9UHQ7 104 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 CTNNA3Q9UI47 895 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 MBD5Q9P267 1494 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 GIGYF1O75420 1035 aaPredicted RBP5.58□□□□□ -1.52
LINC01109-201ENST00000603837 S1PR4O95977 384 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 LDHAP00338 332 aaKnown RBP5.58□□□□□ -1.52
LINC01109-201ENST00000603837 POU5F1Q01860 360 aaKnown RBP5.58□□□□□ -1.52
LINC01109-201ENST00000603837 UVSSAQ2YD98 709 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 CYB5RLQ6IPT4 315 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 ALKBH2Q6NS38 261 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 NT5DC4Q86YG4 428 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 GOLGA6L1Q8N7Z2 621 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 MKL1Q969V6 931 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 AS3MTQ9HBK9 375 aa5.58□□□□□ -1.52
LINC01109-201ENST00000603837 MORC2Q9Y6X9 1032 aaPredicted RBP5.58□□□□□ -1.52
LINC01109-201ENST00000603837 NLRP1Q9C000 1473 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 PPP1R12AO14974 1030 aaPredicted RBP5.57□□□□□ -1.52
LINC01109-201ENST00000603837 PLIN1O60240 522 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 MSS51Q4VC12 460 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 C10orf67Q8IYJ2 551 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 TNPO1Q92973 898 aaKnown RBP5.57□□□□□ -1.52
LINC01109-201ENST00000603837 CCDC47Q96A33 483 aaKnown RBP5.57□□□□□ -1.52
LINC01109-201ENST00000603837 C8orf37Q96NL8 207 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 ALDH8A1Q9H2A2 487 aaPredicted RBP5.57□□□□□ -1.52
LINC01109-201ENST00000603837 CD248Q9HCU0 757 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 PRDM9Q9NQV7 894 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 DIAPH3Q9NSV4 1193 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 BIN2Q9UBW5 565 aaPredicted RBP5.57□□□□□ -1.52
LINC01109-201ENST00000603837 ANAPC4Q9UJX5 808 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 SLC45A1Q9Y2W3 748 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 JRKLQ9Y4A0 524 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 TLDC2A0PJX2 215 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 HSPA5P11021 654 aaKnown RBP5.57□□□□□ -1.52
LINC01109-201ENST00000603837 GGCXP38435 758 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 CHAF1AQ13111 956 aaPredicted RBP5.57□□□□□ -1.52
LINC01109-201ENST00000603837 PPP2R5AQ15172 486 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 PPP1R18Q6NYC8 613 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 CDC37L1Q7L3B6 337 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 PHC3Q8NDX5 983 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 DEF6Q9H4E7 631 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 ZSWIM4Q9H7M6 989 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 COL4A3BPQ9Y5P4 624 aa5.57□□□□□ -1.52
LINC01109-201ENST00000603837 NUP153P49790 1475 aaKnown RBP5.57□□□□□ -1.52
LINC01109-201ENST00000603837 SPATA31E1Q6ZUB1 1445 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 CD53P19397 219 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 ERCC5P28715 1186 aaPredicted RBP5.56□□□□□ -1.52
LINC01109-201ENST00000603837 SART3Q15020 963 aaKnown RBP5.56□□□□□ -1.52
LINC01109-201ENST00000603837 FBXO31Q5XUX0 539 aaPredicted RBP5.56□□□□□ -1.52
LINC01109-201ENST00000603837 PPP2R2DQ66LE6 453 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 ROCK1Q13464 1354 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 WDR7Q9Y4E6 1490 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 SCAPERQ9BY12 1400 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 CFAP99D6REC4 459 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 PPCSQ9HAB8 311 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 SPC25Q9HBM1 224 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 INTUQ9ULD6 942 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 SYNPO2Q9UMS6 1093 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 TBX22Q9Y458 520 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.56□□□□□ -1.52
LINC01109-201ENST00000603837 BCORL1Q5H9F3 1711 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 RAD50Q92878 1312 aa5.56□□□□□ -1.52
LINC01109-201ENST00000603837 IPO5O00410 1097 aaKnown RBP5.56□□□□□ -1.52
LINC01109-201ENST00000603837 PPFIA3O75145 1194 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms