RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 ALG2Q9H553 416 aa3.87□□□□□ -1.79
VCAM1-205ENST00000603679 CWC22Q9HCG8 908 aaKnown RBP3.87□□□□□ -1.79
VCAM1-205ENST00000603679 STK26Q9P289 416 aa3.87□□□□□ -1.79
VCAM1-205ENST00000603679 DPEP1P16444 411 aa3.87□□□□□ -1.79
VCAM1-205ENST00000603679 ZNF16P17020 682 aaPredicted RBP3.87□□□□□ -1.79
VCAM1-205ENST00000603679 IL6STP40189 918 aaPredicted RBP3.87□□□□□ -1.79
VCAM1-205ENST00000603679 PRIM1P49642 420 aaKnown RBP3.87□□□□□ -1.79
VCAM1-205ENST00000603679 FAM109BQ6ICB4 259 aaPredicted RBP3.87□□□□□ -1.79
VCAM1-205ENST00000603679 TEX13AQ9BXU3 409 aaPredicted RBP3.87□□□□□ -1.79
VCAM1-205ENST00000603679 TBC1D2BQ9UPU7 963 aa3.87□□□□□ -1.79
VCAM1-205ENST00000603679 PALM3A6NDB9 673 aaPredicted RBP3.86□□□□□ -1.79
VCAM1-205ENST00000603679 RFX1P22670 979 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 C9orf131Q5VYM1 1079 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 CHRDL2Q6WN34 429 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 ARMC5Q96C12 935 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 TAF1DQ9H5J8 278 aaPredicted RBP3.86□□□□□ -1.79
VCAM1-205ENST00000603679 ERVV-1B6SEH8 477 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 TATP17735 454 aaPredicted RBP3.86□□□□□ -1.79
VCAM1-205ENST00000603679 BMP8BP34820 402 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 TM4SF4P48230 202 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 FAM182BQ5T319 152 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 DCAF11Q8TEB1 546 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 ZBED3Q96IU2 234 aaPredicted RBP3.86□□□□□ -1.79
VCAM1-205ENST00000603679 CRAMP1Q96RY5 1269 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 TANC1Q9C0D5 1861 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 STRN4Q9NRL3 753 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 RALGAPA2Q2PPJ7 1873 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 IRS2Q9Y4H2 1338 aa3.86□□□□□ -1.79
VCAM1-205ENST00000603679 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.86□□□□□ -1.79
VCAM1-205ENST00000603679 LMOD1P29536 600 aaPredicted RBP3.86□□□□□ -1.79
VCAM1-205ENST00000603679 DEKP35659 375 aaKnown RBP3.86□□□□□ -1.79
VCAM1-205ENST00000603679 FKBP1AP62942 108 aaKnown RBP3.86□□□□□ -1.79
VCAM1-205ENST00000603679 WDR33Q9C0J8 1336 aaKnown RBP3.85□□□□□ -1.79
VCAM1-205ENST00000603679 CDCA8Q53HL2 280 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 SIN3AQ96ST3 1273 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 BCL2L13Q9BXK5 485 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 LILRB3O75022 631 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 SRGNP10124 158 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 AKAP4Q5JQC9 854 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 ADAMTS19Q8TE59 1207 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 NMRK2Q9NPI5 230 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 NPDC1Q9NQX5 325 aaPredicted RBP3.85□□□□□ -1.79
VCAM1-205ENST00000603679 TFCP2L1Q9NZI6 479 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 ATG2AQ2TAZ0 1938 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 IL13P35225 146 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 PDE6BP35913 854 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 ECE1P42892 770 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 MLLT1Q03111 559 aaPredicted RBP3.85□□□□□ -1.79
VCAM1-205ENST00000603679 FAM9BQ8IZU0 186 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 PHOX2BQ99453 314 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 LIMD1Q9UGP4 676 aa3.85□□□□□ -1.79
VCAM1-205ENST00000603679 MYH7P12883 1935 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 ROBO3Q96MS0 1386 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 ZNF280AP59817 542 aaPredicted RBP3.84□□□□□ -1.79
VCAM1-205ENST00000603679 C15orf52Q6ZUT6 534 aaKnown RBP3.84□□□□□ -1.79
VCAM1-205ENST00000603679 NME9Q86XW9 330 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 TRMT2AQ8IZ69 625 aaKnown RBP3.84□□□□□ -1.79
VCAM1-205ENST00000603679 RTKN2Q8IZC4 609 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 ABCC12Q96J65 1359 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 ADGRA2Q96PE1 1338 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 AK9Q5TCS8 1911 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 PHF14O94880 888 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 CAMTA2O94983 1202 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 OS9Q13438 667 aaPredicted RBP3.84□□□□□ -1.79
VCAM1-205ENST00000603679 COL19A1Q14993 1142 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 TRAPPC3LQ5T215 181 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 INTS3Q68E01 1043 aaKnown RBP3.84□□□□□ -1.79
VCAM1-205ENST00000603679 METTL3Q86U44 580 aaKnown RBP3.84□□□□□ -1.79
VCAM1-205ENST00000603679 SPIRE2Q8WWL2 714 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 DPF2Q92785 391 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 NAV1Q8NEY1 1877 aa3.84□□□□□ -1.79
VCAM1-205ENST00000603679 ZSWIM8A7E2V4 1837 aa3.84□□□□□ -1.8
VCAM1-205ENST00000603679 IGHA2P01877 340 aa3.84□□□□□ -1.8
VCAM1-205ENST00000603679 RPS12P25398 132 aaKnown RBP3.84□□□□□ -1.8
VCAM1-205ENST00000603679 VEGFBP49765 207 aa3.84□□□□□ -1.8
VCAM1-205ENST00000603679 RSBN1LQ6PCB5 846 aaPredicted RBP3.84□□□□□ -1.8
VCAM1-205ENST00000603679 POTEHQ6S545 545 aa3.84□□□□□ -1.8
VCAM1-205ENST00000603679 DDX12PQ92771 950 aa3.84□□□□□ -1.8
VCAM1-205ENST00000603679 SLC10A3P09131 477 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 SLC52A2Q9HAB3 445 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 RBM27Q9P2N5 1060 aaKnown RBP3.83□□□□□ -1.8
VCAM1-205ENST00000603679 RTCBQ9Y3I0 505 aaKnown RBP3.83□□□□□ -1.8
VCAM1-205ENST00000603679 COL4A4P53420 1690 aaPredicted RBP3.83□□□□□ -1.8
VCAM1-205ENST00000603679 SOWAHDA6NJG2 315 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 PITPNM1O00562 1244 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 GNRH1P01148 92 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 MMP10P09238 476 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 NOP9Q86U38 636 aaKnown RBP3.83□□□□□ -1.8
VCAM1-205ENST00000603679 CNKSR1Q969H4 720 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 OTUD5Q96G74 571 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 TMEM106CQ9BVX2 250 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 TFIP11Q9UBB9 837 aaKnown RBP3.83□□□□□ -1.8
VCAM1-205ENST00000603679 POLKQ9UBT6 870 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 BRPF3Q9ULD4 1205 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 EVI5O60447 810 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 AP1G2O75843 785 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 USP17L8P0C7I0 530 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 MICALL2Q8IY33 904 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 TTLL6Q8N841 843 aa3.83□□□□□ -1.8
VCAM1-205ENST00000603679 PXYLP1Q8TE99 480 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms