RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 GDF6Q6KF10 455 aaPredicted RBP5.6□□□□□ -1.51
SGMS1-207ENST00000602619 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.6□□□□□ -1.51
SGMS1-207ENST00000602619 OGFOD1Q8N543 542 aa5.6□□□□□ -1.51
SGMS1-207ENST00000602619 VRTNQ9H8Y1 702 aa5.6□□□□□ -1.51
SGMS1-207ENST00000602619 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.59□□□□□ -1.51
SGMS1-207ENST00000602619 HMX2A2RU54 273 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L15C9J2P7 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L10C9JJH3 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L13C9JLJ4 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L12C9JPN9 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L11C9JVI0 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L21D6R901 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L18D6R9N7 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L22D6RA61 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L17D6RBQ6 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L19D6RCP7 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L20D6RJB6 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 IDH3AP50213 366 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 NRLP54845 237 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 USP17L24Q0WX57 530 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 TRIM42Q8IWZ5 723 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 GAS2L2Q8NHY3 880 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 PLD4Q96BZ4 506 aa5.59□□□□□ -1.51
SGMS1-207ENST00000602619 LOC102724428A0A0B4J2F2 783 aa5.58□□□□□ -1.52
SGMS1-207ENST00000602619 SIK1P57059 783 aa5.58□□□□□ -1.52
SGMS1-207ENST00000602619 RNF43Q68DV7 783 aa5.58□□□□□ -1.52
SGMS1-207ENST00000602619 OGFOD2Q6N063 350 aa5.58□□□□□ -1.52
SGMS1-207ENST00000602619 C7orf69Q9H7B7 122 aa5.58□□□□□ -1.52
SGMS1-207ENST00000602619 SRA1Q9HD15 236 aaKnown RBP5.58□□□□□ -1.52
SGMS1-207ENST00000602619 C11orf16Q9NQ32 467 aa5.58□□□□□ -1.52
SGMS1-207ENST00000602619 TLR7Q9NYK1 1049 aaKnown RBP5.58□□□□□ -1.52
SGMS1-207ENST00000602619 KLK14Q9P0G3 267 aa5.58□□□□□ -1.52
SGMS1-207ENST00000602619 ZMIZ1Q9ULJ6 1067 aa5.58□□□□□ -1.52
SGMS1-207ENST00000602619 WISP1O95388 367 aa5.57□□□□□ -1.52
SGMS1-207ENST00000602619 RASA1P20936 1047 aa5.57□□□□□ -1.52
SGMS1-207ENST00000602619 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
SGMS1-207ENST00000602619 MAP4K3Q8IVH8 894 aa5.57□□□□□ -1.52
SGMS1-207ENST00000602619 GALNT11Q8NCW6 608 aa5.57□□□□□ -1.52
SGMS1-207ENST00000602619 RFX1P22670 979 aa5.56□□□□□ -1.52
SGMS1-207ENST00000602619 ARID4AP29374 1257 aaPredicted RBP5.56□□□□□ -1.52
SGMS1-207ENST00000602619 LARP1Q6PKG0 1096 aaKnown RBP5.56□□□□□ -1.52
SGMS1-207ENST00000602619 ANKMY2Q8IV38 441 aa5.56□□□□□ -1.52
SGMS1-207ENST00000602619 DCAF11Q8TEB1 546 aa5.56□□□□□ -1.52
SGMS1-207ENST00000602619 ZNF594Q96JF6 807 aaPredicted RBP5.56□□□□□ -1.52
SGMS1-207ENST00000602619 DBNDD2Q9BQY9 259 aa5.56□□□□□ -1.52
SGMS1-207ENST00000602619 MICAL2O94851 1124 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 C8AP07357 584 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 ARSDP51689 593 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 SEC13P55735 322 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 FAM69CQ0P6D2 419 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 SWI5Q1ZZU3 235 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 ABI1Q8IZP0 508 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 UTP4Q969X6 686 aaKnown RBP5.55□□□□□ -1.52
SGMS1-207ENST00000602619 FAM46AQ96IP4 442 aaKnown RBP5.55□□□□□ -1.52
SGMS1-207ENST00000602619 KCNK4Q9NYG8 393 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 TRIM33Q9UPN9 1127 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 USP20Q9Y2K6 914 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 PPME1Q9Y570 386 aa5.55□□□□□ -1.52
SGMS1-207ENST00000602619 ACIN1Q9UKV3 1341 aaKnown RBP5.54□□□□□ -1.52
SGMS1-207ENST00000602619 OPLAHO14841 1288 aa5.54□□□□□ -1.52
SGMS1-207ENST00000602619 TM4SF5O14894 197 aa5.54□□□□□ -1.52
SGMS1-207ENST00000602619 LGR5O75473 907 aa5.54□□□□□ -1.52
SGMS1-207ENST00000602619 EGFRP00533 1210 aa5.54□□□□□ -1.52
SGMS1-207ENST00000602619 HOXA10P31260 410 aaPredicted RBP5.54□□□□□ -1.52
SGMS1-207ENST00000602619 DPYDQ12882 1025 aa5.54□□□□□ -1.52
SGMS1-207ENST00000602619 UVSSAQ2YD98 709 aa5.54□□□□□ -1.52
SGMS1-207ENST00000602619 SHKBP1Q8TBC3 707 aa5.54□□□□□ -1.52
SGMS1-207ENST00000602619 NSUN5Q96P11 429 aaKnown RBP5.54□□□□□ -1.52
SGMS1-207ENST00000602619 CEP41Q9BYV8 373 aa5.54□□□□□ -1.52
SGMS1-207ENST00000602619 NOVA2Q9UNW9 492 aaKnown RBP5.54□□□□□ -1.52
SGMS1-207ENST00000602619 RBM19Q9Y4C8 960 aaKnown RBP5.54□□□□□ -1.52
SGMS1-207ENST00000602619 TMEM88BA6NKF7 163 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 LINC01387J3KSC0 135 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 MMP20O60882 483 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 GHRHP01286 108 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 CD68P34810 354 aaPredicted RBP5.53□□□□□ -1.52
SGMS1-207ENST00000602619 DGKZQ13574 1117 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 ACAD11Q709F0 780 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 CLEC10AQ8IUN9 316 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 STK32AQ8WU08 396 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 MYRFLQ96LU7 910 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 FAM83CQ9BQN1 747 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 USTQ9Y2C2 406 aa5.53□□□□□ -1.52
SGMS1-207ENST00000602619 RTCBQ9Y3I0 505 aaKnown RBP5.53□□□□□ -1.52
SGMS1-207ENST00000602619 XYLBO75191 536 aa5.52□□□□□ -1.53
SGMS1-207ENST00000602619 PSAPP07602 524 aa5.52□□□□□ -1.53
SGMS1-207ENST00000602619 TMEM164Q5U3C3 297 aa5.52□□□□□ -1.53
SGMS1-207ENST00000602619 KIAA1211Q6ZU35 1233 aa5.52□□□□□ -1.53
SGMS1-207ENST00000602619 FAM20CQ8IXL6 584 aa5.52□□□□□ -1.53
SGMS1-207ENST00000602619 POU5F2Q8N7G0 328 aa5.52□□□□□ -1.53
SGMS1-207ENST00000602619 CLP1Q92989 425 aaKnown RBP5.52□□□□□ -1.53
SGMS1-207ENST00000602619 MUC3BQ9H195 1237 aa5.52□□□□□ -1.53
SGMS1-207ENST00000602619 WEE1P30291 646 aa5.51□□□□□ -1.53
SGMS1-207ENST00000602619 CDCA8Q53HL2 280 aa5.51□□□□□ -1.53
SGMS1-207ENST00000602619 TXNDC11Q6PKC3 985 aa5.51□□□□□ -1.53
SGMS1-207ENST00000602619 CACTIN-AS1Q8N1I8 211 aa5.51□□□□□ -1.53
SGMS1-207ENST00000602619 FAM200AQ8TCP9 573 aa5.51□□□□□ -1.53
SGMS1-207ENST00000602619 ARID3AQ99856 593 aa5.51□□□□□ -1.53
SGMS1-207ENST00000602619 HINFPQ9BQA5 517 aa5.51□□□□□ -1.53
SGMS1-207ENST00000602619 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms