RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 HOXA10P31260 410 aaPredicted RBP10.21□□□□□ -0.78
COMMD3-215ENST00000602574 TBC1D10BQ4KMP7 808 aaPredicted RBP10.21□□□□□ -0.78
COMMD3-215ENST00000602574 CCDC158Q5M9N0 1113 aa10.21□□□□□ -0.78
COMMD3-215ENST00000602574 CCDC50Q8IVM0 306 aa10.21□□□□□ -0.78
COMMD3-215ENST00000602574 ANKRD13AQ8IZ07 590 aa10.21□□□□□ -0.78
COMMD3-215ENST00000602574 SPDYE1Q8NFV5 336 aaPredicted RBP10.21□□□□□ -0.78
COMMD3-215ENST00000602574 CDCA7LQ96GN5 454 aa10.21□□□□□ -0.78
COMMD3-215ENST00000602574 ACBD3Q9H3P7 528 aa10.21□□□□□ -0.78
COMMD3-215ENST00000602574 C1orf115Q9H7X2 142 aa10.21□□□□□ -0.78
COMMD3-215ENST00000602574 SUGT1Q9Y2Z0 365 aa10.21□□□□□ -0.78
COMMD3-215ENST00000602574 ZNF608Q9ULD9 1512 aaPredicted RBP10.21□□□□□ -0.78
COMMD3-215ENST00000602574 RPAP1Q9BWH6 1393 aaPredicted RBP10.2□□□□□ -0.78
COMMD3-215ENST00000602574 GOLGA6L19H0YKK7 550 aa10.2□□□□□ -0.78
COMMD3-215ENST00000602574 SLC4A8Q2Y0W8 1093 aa10.2□□□□□ -0.78
COMMD3-215ENST00000602574 CLEC4GQ6UXB4 293 aa10.2□□□□□ -0.78
COMMD3-215ENST00000602574 ARHGAP45Q92619 1136 aa10.2□□□□□ -0.78
COMMD3-215ENST00000602574 CLUAP1Q96AJ1 413 aa10.2□□□□□ -0.78
COMMD3-215ENST00000602574 ALS2CR12Q96Q35 445 aa10.2□□□□□ -0.78
COMMD3-215ENST00000602574 SLC4A1APQ9BWU0 796 aaKnown RBP10.2□□□□□ -0.78
COMMD3-215ENST00000602574 NACA2Q9H009 215 aa10.2□□□□□ -0.78
COMMD3-215ENST00000602574 EIF4G3O43432 1585 aaKnown RBP10.2□□□□□ -0.78
COMMD3-215ENST00000602574 SPDYE3A6NKU9 549 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 LIN7AO14910 233 aaPredicted RBP10.19□□□□□ -0.78
COMMD3-215ENST00000602574 MARCH6O60337 910 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 PRPF40AO75400 957 aaKnown RBP10.19□□□□□ -0.78
COMMD3-215ENST00000602574 RPL13P26373 211 aaKnown RBP10.19□□□□□ -0.78
COMMD3-215ENST00000602574 PABPC4Q13310 644 aaKnown RBP eCLIP10.19□□□□□ -0.782e-13■□□□□ 8.7
COMMD3-215ENST00000602574 CCDC73Q6ZRK6 1079 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 FAM200AQ8TCP9 573 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 XBP1P17861 261 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 CASTP20810 708 aaKnown RBP10.19□□□□□ -0.78
COMMD3-215ENST00000602574 EIF4BP23588 611 aaKnown RBP10.19□□□□□ -0.78
COMMD3-215ENST00000602574 RANBP1P43487 201 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 HDLBPQ00341 1268 aaKnown RBP10.19□□□□□ -0.78
COMMD3-215ENST00000602574 SLC7A5Q01650 507 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 TPD52L1Q16890 204 aaPredicted RBP10.19□□□□□ -0.78
COMMD3-215ENST00000602574 INF2Q27J81 1249 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 KIAA0753Q2KHM9 967 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 CCDC93Q567U6 631 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 AKNAD1Q5T1N1 836 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 ARMC3Q5W041 872 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 APLFQ8IW19 511 aaPredicted RBP10.19□□□□□ -0.78
COMMD3-215ENST00000602574 SCLT1Q96NL6 688 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 EPAS1Q99814 870 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 ORC3Q9UBD5 711 aaPredicted RBP10.19□□□□□ -0.78
COMMD3-215ENST00000602574 ITGB1BP2Q9UKP3 347 aa10.19□□□□□ -0.78
COMMD3-215ENST00000602574 CBFA2T2O43439 604 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 FSBPO95073 299 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 MAP3K9P80192 1104 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 LRRC23Q53EV4 343 aaPredicted RBP10.18□□□□□ -0.78
COMMD3-215ENST00000602574 SLC30A9Q6PML9 568 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 MTHFD1LQ6UB35 978 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 TTLL7Q6ZT98 887 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 AFAP1Q8N556 730 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 CEP112Q8N8E3 955 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 SMYD1Q8NB12 490 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 ERMNQ8TAM6 284 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 CCDC114Q96M63 670 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 IFT57Q9NWB7 429 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 ANKIB1Q9P2G1 1089 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 COL17A1Q9UMD9 1497 aaPredicted RBP10.18□□□□□ -0.78
COMMD3-215ENST00000602574 PBRM1Q86U86 1689 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 AK9Q5TCS8 1911 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 UNCXA6NJT0 531 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 FERP16591 822 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 MPP3Q13368 585 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 SLMAPQ14BN4 828 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 PLCB4Q15147 1175 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 CLPPQ16740 277 aaPredicted RBP10.18□□□□□ -0.78
COMMD3-215ENST00000602574 CDC37L1Q7L3B6 337 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 GAS2L2Q8NHY3 880 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 QPCTLQ9NXS2 382 aa10.18□□□□□ -0.78
COMMD3-215ENST00000602574 NUP160Q12769 1436 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 ERICH2A1L162 156 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 KIF4AO95239 1232 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 KRT72Q14CN4 511 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 PTPN14Q15678 1187 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 DPY19L2Q6NUT2 758 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 NEK9Q8TD19 979 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 GPCPD1Q9NPB8 672 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 ABCC2Q92887 1545 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 HMMRO75330 724 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 EZRP15311 586 aaKnown RBP10.17□□□□□ -0.78
COMMD3-215ENST00000602574 ZFYVE27Q5T4F4 411 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 CC2D1AQ6P1N0 951 aaPredicted RBP10.17□□□□□ -0.78
COMMD3-215ENST00000602574 FOXR1Q6PIV2 292 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 SPATS2Q86XZ4 545 aaKnown RBP10.17□□□□□ -0.78
COMMD3-215ENST00000602574 PARP9Q8IXQ6 854 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 FAM76AQ8TAV0 307 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 HOOK2Q96ED9 719 aa10.17□□□□□ -0.78
COMMD3-215ENST00000602574 RBM41Q96IZ5 413 aaKnown RBP10.17□□□□□ -0.78
COMMD3-215ENST00000602574 MPHOSPH6Q99547 160 aaKnown RBP10.17□□□□□ -0.78
COMMD3-215ENST00000602574 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.17□□□□□ -0.78
COMMD3-215ENST00000602574 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.17□□□□□ -0.784e-6■■■■□ 22
COMMD3-215ENST00000602574 PPFIA3O75145 1194 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 CCDC38Q502W7 563 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 ARHGAP29Q52LW3 1261 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 DUSP27Q5VZP5 1158 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 LMBR1Q8WVP7 490 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 SPDL1Q96EA4 605 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms