RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-206	ENST00000602307	G2E3	Q7L622	706 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	PAG1	Q9NWQ8	432 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	FLT4	P35916	1363 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	NPHP3	Q7Z494	1330 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	USP8	P40818	1118 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	PAFAH1B1	P43034	410 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	ESR2	Q92731	530 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307		A0A1W2PP64	1363 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	F13A1	P00488	732 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	AK2	P54819	239 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	AMPD3	Q01432	767 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	RTN1	Q16799	776 aa		13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	IFIT1B	Q5T764	474 aa	Known RBP	13.88	□□□□□ -0.19
PTPN23-206	ENST00000602307	KIF20A	O95235	890 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	GC	P02774	474 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	SNW1	Q13573	536 aa	Known RBP	13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	MAP3K19	Q56UN5	1328 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	ZNF518A	Q6AHZ1	1483 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	PRC1	O43663	620 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	KRT23	Q9C075	422 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	HMGB2	P26583	209 aa	Known RBP	13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	TFCP2	Q12800	502 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	UVSSA	Q2YD98	709 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	RNF123	Q5XPI4	1314 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	CPA1	P15085	419 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	CETN2	P41208	172 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	GNG11	P61952	73 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	SETDB2	Q96T68	719 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	DNAJC25	Q9H1X3	360 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	KDM2B	Q8NHM5	1336 aa		13.87	□□□□□ -0.19
PTPN23-206	ENST00000602307	TSPY3	P0CV98	308 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	TSPY8	P0CW00	308 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	UBASH3A	P57075	661 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	RAB3GAP1	Q15042	981 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	NAA16	Q6N069	864 aa	Predicted RBP	13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	KANK3	Q6NY19	840 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	NLRP3	Q96P20	1036 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	CABP5	Q9NP86	173 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	ABCC10	Q5T3U5	1492 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	HLA-DOA	P06340	250 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	CCDC186	Q7Z3E2	898 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	MRPS27	Q92552	414 aa	Known RBP	13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	TRIM47	Q96LD4	638 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	MSH6	P52701	1360 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	SIRT1	Q96EB6	747 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	SAMM50	Q9Y512	469 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	NPAT	Q14207	1427 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	TMCO5B	A8MYB1	307 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	MYO1B	O43795	1136 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	APOBR	Q0VD83	1088 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	MIGA1	Q8NAN2	632 aa		13.86	□□□□□ -0.19
PTPN23-206	ENST00000602307	CAVIN2	O95810	425 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	DES	P17661	470 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	CHML	P26374	656 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	TTLL12	Q14166	644 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	RRAGB	Q5VZM2	374 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	CREB3L3	Q68CJ9	461 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	KCNG4	Q8TDN1	519 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	GOLGA6L7	A0A1B0GV03	622 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	KCNA6	P17658	529 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	ZRSR2	Q15696	482 aa	Known RBP	13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	PPP4R3A	Q6IN85	833 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	SPATA31E1	Q6ZUB1	1445 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	DZIP3	Q86Y13	1208 aa	Known RBP	13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	ARHGEF5	Q12774	1597 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	GSTTP1	A0A1W2PQM5	241 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	ZBTB7B	O15156	539 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	NOP2	P46087	812 aa	Known RBP	13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	HEATR3	Q7Z4Q2	680 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	FAM200A	Q8TCP9	573 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	BICC1	Q9H694	974 aa	Known RBP	13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	GOPC	Q9HD26	462 aa		13.85	□□□□□ -0.19
PTPN23-206	ENST00000602307	SPDYE4	A6NLX3	237 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	NEBL	O76041	1014 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	RXRA	P19793	462 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	MAP9	Q49MG5	647 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	TMTC2	Q8N394	836 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	ZMYND15	Q9H091	742 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	TTC12	Q9H892	705 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	AOPEP	Q8N6M6	819 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	CNNM2	Q9H8M5	875 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	ABCA8	O94911	1581 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	SOS1	Q07889	1333 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	TTC41P	Q6P2S7	1318 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	HOXC9	P31274	260 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	GBP2	P32456	591 aa	Predicted RBP	13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	PRPF4B	Q13523	1007 aa	Known RBP	13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	DDB1	Q16531	1140 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	SKIL	P12757	684 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	IL2RB	P14784	551 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	PICALM	Q13492	652 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	CEP135	Q66GS9	1140 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	DYDC1	Q8WWB3	177 aa		13.84	□□□□□ -0.19
PTPN23-206	ENST00000602307	MMRN2	Q9H8L6	949 aa		13.83	□□□□□ -0.19
PTPN23-206	ENST00000602307	RNF216	Q9NWF9	866 aa	Predicted RBP	13.83	□□□□□ -0.19
PTPN23-206	ENST00000602307	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.83	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms