RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 CDHR2Q9BYE9 1310 aa18.36■□□□□ 0.53
NEAT1-203ENST00000601801 DUOX1Q9NRD9 1551 aa18.36■□□□□ 0.53
NEAT1-203ENST00000601801 CWC25Q9NXE8 425 aaPredicted RBP18.36■□□□□ 0.53
NEAT1-203ENST00000601801 TNRC18O15417 2968 aaPredicted RBP18.35■□□□□ 0.53
NEAT1-203ENST00000601801 C6orf229H3BNL8 230 aa18.35■□□□□ 0.53
NEAT1-203ENST00000601801 PCCAP05165 728 aaPredicted RBP18.35■□□□□ 0.53
NEAT1-203ENST00000601801 GMPSP49915 693 aaPredicted RBP18.35■□□□□ 0.53
NEAT1-203ENST00000601801 STK31Q9BXU1 1019 aa18.35■□□□□ 0.53
NEAT1-203ENST00000601801 MRS2Q9HD23 443 aa18.35■□□□□ 0.53
NEAT1-203ENST00000601801 PGAP2Q9UHJ9 254 aa18.35■□□□□ 0.53
NEAT1-203ENST00000601801 MAP3K2Q9Y2U5 619 aa18.34■□□□□ 0.53
NEAT1-203ENST00000601801 PDE8AO60658 829 aa18.33■□□□□ 0.52
NEAT1-203ENST00000601801 GPSM2P81274 684 aa18.33■□□□□ 0.52
NEAT1-203ENST00000601801 TWISTNBQ3B726 338 aaPredicted RBP18.33■□□□□ 0.52
NEAT1-203ENST00000601801 CCDC152Q4G0S7 254 aa18.33■□□□□ 0.52
NEAT1-203ENST00000601801 KSR2Q6VAB6 950 aa18.33■□□□□ 0.52
NEAT1-203ENST00000601801 EYA3Q99504 573 aa18.33■□□□□ 0.52
NEAT1-203ENST00000601801 GLIS2Q9BZE0 524 aaPredicted RBP18.33■□□□□ 0.52
NEAT1-203ENST00000601801 COL4A1P02462 1669 aa18.32■□□□□ 0.52
NEAT1-203ENST00000601801 IL16Q14005 1332 aa18.32■□□□□ 0.52
NEAT1-203ENST00000601801 YDJCA8MPS7 323 aa18.32■□□□□ 0.52
NEAT1-203ENST00000601801 RIMBP2O15034 1052 aa18.32■□□□□ 0.52
NEAT1-203ENST00000601801 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
NEAT1-203ENST00000601801 POLLQ9UGP5 575 aa18.32■□□□□ 0.52
NEAT1-203ENST00000601801 PI4KAP2A4QPH2 592 aa18.31■□□□□ 0.52
NEAT1-203ENST00000601801 NEXNQ0ZGT2 675 aa18.31■□□□□ 0.52
NEAT1-203ENST00000601801 DGKZQ13574 1117 aa18.31■□□□□ 0.52
NEAT1-203ENST00000601801 PI4KAP1Q8N8J0 262 aa18.31■□□□□ 0.52
NEAT1-203ENST00000601801 ZC3H15Q8WU90 426 aaKnown RBP18.31■□□□□ 0.52
NEAT1-203ENST00000601801 JARID2Q92833 1246 aaPredicted RBP18.31■□□□□ 0.52
NEAT1-203ENST00000601801 DBNDD1Q9H9R9 158 aa18.31■□□□□ 0.52
NEAT1-203ENST00000601801 SEC31BQ9NQW1 1179 aa18.31■□□□□ 0.52
NEAT1-203ENST00000601801 H7C1D1 291 aa18.3■□□□□ 0.52
NEAT1-203ENST00000601801 HIRAP54198 1017 aaPredicted RBP18.3■□□□□ 0.52
NEAT1-203ENST00000601801 TBC1D16Q8TBP0 767 aa18.3■□□□□ 0.52
NEAT1-203ENST00000601801 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
NEAT1-203ENST00000601801 ANKIB1Q9P2G1 1089 aa18.3■□□□□ 0.52
NEAT1-203ENST00000601801 CNOT7Q9UIV1 285 aaKnown RBP18.3■□□□□ 0.52
NEAT1-203ENST00000601801 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
NEAT1-203ENST00000601801 CDC37L1Q7L3B6 337 aa18.29■□□□□ 0.52
NEAT1-203ENST00000601801 DPF2Q92785 391 aa18.29■□□□□ 0.52
NEAT1-203ENST00000601801 CCDC85AQ96PX6 553 aaPredicted RBP18.29■□□□□ 0.52
NEAT1-203ENST00000601801 ZNF408Q9H9D4 720 aa18.29■□□□□ 0.52
NEAT1-203ENST00000601801 PODXL2Q9NZ53 605 aa18.29■□□□□ 0.52
NEAT1-203ENST00000601801 POLR2AP24928 1970 aaKnown RBP18.29■□□□□ 0.52
NEAT1-203ENST00000601801 G3V3G9 751 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 PSMD14O00487 310 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 ECE2O60344 883 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 IGKV5-2P06315 115 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 NOGQ13253 232 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 DOK7Q18PE1 504 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 DCAF8Q5TAQ9 597 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 ANKRD18AQ8IVF6 992 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 MICALL2Q8IY33 904 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 GGA1Q9UJY5 639 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 ZBTB12Q9Y330 459 aaPredicted RBP18.28■□□□□ 0.52
NEAT1-203ENST00000601801 PDE4DIPQ5VU43 2346 aa18.28■□□□□ 0.52
NEAT1-203ENST00000601801 UFL1O94874 794 aa18.27■□□□□ 0.52
NEAT1-203ENST00000601801 TRPM4Q8TD43 1214 aa18.27■□□□□ 0.52
NEAT1-203ENST00000601801 ZIC5Q96T25 663 aa18.27■□□□□ 0.52
NEAT1-203ENST00000601801 MYH3P11055 1940 aa18.26■□□□□ 0.51
NEAT1-203ENST00000601801 AKAP11Q9UKA4 1901 aa18.26■□□□□ 0.51
NEAT1-203ENST00000601801 RPS12P25398 132 aaKnown RBP18.26■□□□□ 0.51
NEAT1-203ENST00000601801 CTSWP56202 376 aa18.26■□□□□ 0.51
NEAT1-203ENST00000601801 G2E3Q7L622 706 aa18.26■□□□□ 0.51
NEAT1-203ENST00000601801 WDR63Q8IWG1 891 aa18.26■□□□□ 0.51
NEAT1-203ENST00000601801 CDC5LQ99459 802 aaKnown RBP18.26■□□□□ 0.51
NEAT1-203ENST00000601801 SALL2Q9Y467 1007 aaPredicted RBP18.26■□□□□ 0.51
NEAT1-203ENST00000601801 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
NEAT1-203ENST00000601801 SHTN1A0MZ66 631 aa18.25■□□□□ 0.51
NEAT1-203ENST00000601801 NEURL1BA8MQ27 555 aa18.25■□□□□ 0.51
NEAT1-203ENST00000601801 HUNKP57058 714 aa18.25■□□□□ 0.51
NEAT1-203ENST00000601801 CWF19L2Q2TBE0 894 aaKnown RBP18.25■□□□□ 0.51
NEAT1-203ENST00000601801 XDHP47989 1333 aa18.24■□□□□ 0.51
NEAT1-203ENST00000601801 CACNA1FO60840 1977 aa18.24■□□□□ 0.51
NEAT1-203ENST00000601801 FLIIQ13045 1269 aa18.24■□□□□ 0.51
NEAT1-203ENST00000601801 USP48Q86UV5 1035 aa18.24■□□□□ 0.51
NEAT1-203ENST00000601801 TTLL11Q8NHH1 800 aa18.24■□□□□ 0.51
NEAT1-203ENST00000601801 KCNQ5Q9NR82 932 aa18.24■□□□□ 0.51
NEAT1-203ENST00000601801 RTL9Q8NET4 1388 aa18.23■□□□□ 0.51
NEAT1-203ENST00000601801 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
NEAT1-203ENST00000601801 SAMD7Q7Z3H4 446 aa18.23■□□□□ 0.51
NEAT1-203ENST00000601801 UBE3BQ7Z3V4 1068 aa18.23■□□□□ 0.51
NEAT1-203ENST00000601801 FAM155AB1AL88 458 aaPredicted RBP18.22■□□□□ 0.51
NEAT1-203ENST00000601801 H7C1W4 665 aa18.22■□□□□ 0.51
NEAT1-203ENST00000601801 VIL1P09327 827 aaKnown RBP18.22■□□□□ 0.51
NEAT1-203ENST00000601801 ATP2B4P23634 1241 aa18.22■□□□□ 0.51
NEAT1-203ENST00000601801 TBC1D10BQ4KMP7 808 aaPredicted RBP18.22■□□□□ 0.51
NEAT1-203ENST00000601801 RGMBQ6NW40 437 aa18.22■□□□□ 0.51
NEAT1-203ENST00000601801 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
NEAT1-203ENST00000601801 GREM2Q9H772 168 aa18.22■□□□□ 0.51
NEAT1-203ENST00000601801 SAGE1Q9NXZ1 904 aa18.22■□□□□ 0.51
NEAT1-203ENST00000601801 SCN9AQ15858 1988 aa18.21■□□□□ 0.51
NEAT1-203ENST00000601801 VAMP4O75379 141 aa18.21■□□□□ 0.51
NEAT1-203ENST00000601801 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
NEAT1-203ENST00000601801 GCKRQ14397 625 aa18.21■□□□□ 0.51
NEAT1-203ENST00000601801 RBM26Q5T8P6 1007 aaKnown RBP18.21■□□□□ 0.51
NEAT1-203ENST00000601801 DLK2Q6UY11 383 aa18.21■□□□□ 0.51
NEAT1-203ENST00000601801 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
NEAT1-203ENST00000601801 BSDC1Q9NW68 430 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms