RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 FAM135BQ49AJ0 1406 aa11.28□□□□□ -0.6
LINC00343-209ENST00000601607 MIA2Q96PC5 1412 aa11.28□□□□□ -0.6
LINC00343-209ENST00000601607 KIAA1107Q9UPP5 1409 aa11.28□□□□□ -0.6
LINC00343-209ENST00000601607 PHF20L1A8MW92 1017 aa11.28□□□□□ -0.6
LINC00343-209ENST00000601607 SWI5Q1ZZU3 235 aa11.28□□□□□ -0.6
LINC00343-209ENST00000601607 ALDH16A1Q8IZ83 802 aa11.28□□□□□ -0.6
LINC00343-209ENST00000601607 PRIMPOLQ96LW4 560 aa11.28□□□□□ -0.6
LINC00343-209ENST00000601607 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
LINC00343-209ENST00000601607 NDFIP2Q9NV92 336 aa11.28□□□□□ -0.6
LINC00343-209ENST00000601607 GPATCH8Q9UKJ3 1502 aaKnown RBP11.28□□□□□ -0.6
LINC00343-209ENST00000601607 DEPDC5O75140 1603 aa11.27□□□□□ -0.6
LINC00343-209ENST00000601607 NLRP1Q9C000 1473 aa11.27□□□□□ -0.6
LINC00343-209ENST00000601607 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.61
LINC00343-209ENST00000601607 PRMT3O60678 531 aa11.27□□□□□ -0.61
LINC00343-209ENST00000601607 GPAT2Q6NUI2 795 aa11.27□□□□□ -0.61
LINC00343-209ENST00000601607 GPC6Q9Y625 555 aaPredicted RBP11.27□□□□□ -0.61
LINC00343-209ENST00000601607 IQGAP1P46940 1657 aa11.27□□□□□ -0.61
LINC00343-209ENST00000601607 BCRP11274 1271 aa11.26□□□□□ -0.61
LINC00343-209ENST00000601607 ARID3AQ99856 593 aa11.26□□□□□ -0.61
LINC00343-209ENST00000601607 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
LINC00343-209ENST00000601607 LRRIQ1Q96JM4 1722 aa11.26□□□□□ -0.61
LINC00343-209ENST00000601607 KHNYNO15037 678 aaKnown RBP11.25□□□□□ -0.61
LINC00343-209ENST00000601607 KIF3BO15066 747 aa11.25□□□□□ -0.61
LINC00343-209ENST00000601607 PPP1R15AO75807 674 aaPredicted RBP11.25□□□□□ -0.61
LINC00343-209ENST00000601607 FGFR3P22607 806 aa11.25□□□□□ -0.61
LINC00343-209ENST00000601607 PODNQ7Z5L7 613 aa11.25□□□□□ -0.61
LINC00343-209ENST00000601607 VTI1AQ96AJ9 217 aa11.25□□□□□ -0.61
LINC00343-209ENST00000601607 HSH2DQ96JZ2 352 aa11.25□□□□□ -0.61
LINC00343-209ENST00000601607 CFDP1Q9UEE9 299 aaPredicted RBP11.25□□□□□ -0.61
LINC00343-209ENST00000601607 PLEKHH2Q8IVE3 1493 aa11.25□□□□□ -0.61
LINC00343-209ENST00000601607 FOXO3O43524 673 aa11.24□□□□□ -0.61
LINC00343-209ENST00000601607 SAMD5Q5TGI4 173 aa11.24□□□□□ -0.61
LINC00343-209ENST00000601607 WASHC2CQ9Y4E1 1318 aa11.24□□□□□ -0.61
LINC00343-209ENST00000601607 DHX29Q7Z478 1369 aaKnown RBP11.24□□□□□ -0.61
LINC00343-209ENST00000601607 CCDC18Q5T9S5 1454 aa11.24□□□□□ -0.61
LINC00343-209ENST00000601607 KDM5DQ9BY66 1539 aa11.24□□□□□ -0.61
LINC00343-209ENST00000601607 FAM157BP0CG42 384 aa11.23□□□□□ -0.61
LINC00343-209ENST00000601607 MAPTP10636 758 aaKnown RBP11.23□□□□□ -0.61
LINC00343-209ENST00000601607 CTBSQ01459 385 aa11.23□□□□□ -0.61
LINC00343-209ENST00000601607 TNP2Q05952 138 aa11.23□□□□□ -0.61
LINC00343-209ENST00000601607 BEND7Q8N7W2 519 aaPredicted RBP11.23□□□□□ -0.61
LINC00343-209ENST00000601607 NEDD1Q8NHV4 660 aa11.23□□□□□ -0.61
LINC00343-209ENST00000601607 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
LINC00343-209ENST00000601607 OCLNQ16625 522 aa11.22□□□□□ -0.61
LINC00343-209ENST00000601607 RTN1Q16799 776 aa11.22□□□□□ -0.61
LINC00343-209ENST00000601607 ZNF280CQ8ND82 737 aa11.22□□□□□ -0.61
LINC00343-209ENST00000601607 CASKIN1Q8WXD9 1431 aa11.22□□□□□ -0.61
LINC00343-209ENST00000601607 SUSD3Q96L08 255 aa11.22□□□□□ -0.61
LINC00343-209ENST00000601607 ANKIB1Q9P2G1 1089 aa11.22□□□□□ -0.61
LINC00343-209ENST00000601607 ZNF644Q9H582 1327 aaPredicted RBP11.21□□□□□ -0.61
LINC00343-209ENST00000601607 BMP4P12644 408 aa11.21□□□□□ -0.61
LINC00343-209ENST00000601607 CD33P20138 364 aa11.21□□□□□ -0.61
LINC00343-209ENST00000601607 HCN2Q9UL51 889 aa11.21□□□□□ -0.61
LINC00343-209ENST00000601607 TMEM94Q12767 1356 aa11.2□□□□□ -0.62
LINC00343-209ENST00000601607 MAP2K3P46734 347 aa11.2□□□□□ -0.62
LINC00343-209ENST00000601607 ACDQ96AP0 544 aa11.2□□□□□ -0.62
LINC00343-209ENST00000601607 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
LINC00343-209ENST00000601607 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
LINC00343-209ENST00000601607 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
LINC00343-209ENST00000601607 JCADQ9P266 1359 aa11.19□□□□□ -0.62
LINC00343-209ENST00000601607 C2CD2LO14523 706 aa11.19□□□□□ -0.62
LINC00343-209ENST00000601607 EFSO43281 561 aa11.19□□□□□ -0.62
LINC00343-209ENST00000601607 LTKP29376 864 aa11.19□□□□□ -0.62
LINC00343-209ENST00000601607 CLP1Q92989 425 aaKnown RBP11.19□□□□□ -0.62
LINC00343-209ENST00000601607 CEP63Q96MT8 703 aa11.19□□□□□ -0.62
LINC00343-209ENST00000601607 ZC3H13Q5T200 1668 aaKnown RBP11.18□□□□□ -0.62
LINC00343-209ENST00000601607 HIF1AQ16665 826 aa11.18□□□□□ -0.62
LINC00343-209ENST00000601607 QTRT2Q9H974 415 aaKnown RBP11.18□□□□□ -0.62
LINC00343-209ENST00000601607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC00343-209ENST00000601607 STRN4Q9NRL3 753 aa11.18□□□□□ -0.62
LINC00343-209ENST00000601607 CXXC1Q9P0U4 656 aaPredicted RBP11.18□□□□□ -0.62
LINC00343-209ENST00000601607 MBD5Q9P267 1494 aa11.18□□□□□ -0.62
LINC00343-209ENST00000601607 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
LINC00343-209ENST00000601607 ZNF772Q68DY9 489 aaPredicted RBP11.17□□□□□ -0.62
LINC00343-209ENST00000601607 TXNDC2Q86VQ3 553 aa11.17□□□□□ -0.62
LINC00343-209ENST00000601607 OXCT2Q9BYC2 517 aaPredicted RBP11.17□□□□□ -0.62
LINC00343-209ENST00000601607 KLK14Q9P0G3 267 aa11.17□□□□□ -0.62
LINC00343-209ENST00000601607 MARK1Q9P0L2 795 aa11.17□□□□□ -0.62
LINC00343-209ENST00000601607 SLAIN2Q9P270 581 aa11.17□□□□□ -0.62
LINC00343-209ENST00000601607 ROBO1Q9Y6N7 1651 aa11.17□□□□□ -0.62
LINC00343-209ENST00000601607 LRP6O75581 1613 aa11.17□□□□□ -0.62
LINC00343-209ENST00000601607 CNTNAP5Q8WYK1 1306 aa11.16□□□□□ -0.62
LINC00343-209ENST00000601607 DGKZQ13574 1117 aa11.16□□□□□ -0.62
LINC00343-209ENST00000601607 LAMC2Q13753 1193 aa11.16□□□□□ -0.62
LINC00343-209ENST00000601607 MEX3CQ5U5Q3 659 aaKnown RBP11.16□□□□□ -0.62
LINC00343-209ENST00000601607 MKNK1Q9BUB5 465 aa11.16□□□□□ -0.62
LINC00343-209ENST00000601607 ERVK-7P63135 1459 aa11.15□□□□□ -0.62
LINC00343-209ENST00000601607 NCOA2Q15596 1464 aa11.15□□□□□ -0.62
LINC00343-209ENST00000601607 OIP5O43482 229 aa11.15□□□□□ -0.62
LINC00343-209ENST00000601607 ATP2B4P23634 1241 aa11.15□□□□□ -0.62
LINC00343-209ENST00000601607 SFSWAPQ12872 951 aaKnown RBP11.15□□□□□ -0.62
LINC00343-209ENST00000601607 FAM182BQ5T319 152 aa11.15□□□□□ -0.62
LINC00343-209ENST00000601607 BTLAQ7Z6A9 289 aa11.15□□□□□ -0.62
LINC00343-209ENST00000601607 DCAF5Q96JK2 942 aa11.15□□□□□ -0.62
LINC00343-209ENST00000601607 BRD7Q9NPI1 651 aa11.15□□□□□ -0.62
LINC00343-209ENST00000601607 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
LINC00343-209ENST00000601607 XIRP1Q702N8 1843 aaKnown RBP11.14□□□□□ -0.63
LINC00343-209ENST00000601607 RXRBP28702 533 aa11.14□□□□□ -0.63
LINC00343-209ENST00000601607 TYRO3Q06418 890 aa11.14□□□□□ -0.63
LINC00343-209ENST00000601607 MYO19Q96H55 970 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms