RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 MPNDQ8N594 471 aa17.22■□□□□ 0.35
VRK3-219ENST00000600137 KLHDC4Q8TBB5 520 aa17.22■□□□□ 0.35
VRK3-219ENST00000600137 HDAC5Q9UQL6 1122 aa17.22■□□□□ 0.35
VRK3-219ENST00000600137 RIPOR2Q9Y4F9 1068 aa17.22■□□□□ 0.35
VRK3-219ENST00000600137 COL4A5P29400 1685 aa17.22■□□□□ 0.35
VRK3-219ENST00000600137 PNMA6EA0A0J9YXQ4 647 aa17.21■□□□□ 0.35
VRK3-219ENST00000600137 LMNB1P20700 586 aa17.21■□□□□ 0.35
VRK3-219ENST00000600137 IGHMBP2P38935 993 aaKnown RBP17.21■□□□□ 0.35
VRK3-219ENST00000600137 C9orf131Q5VYM1 1079 aa17.21■□□□□ 0.35
VRK3-219ENST00000600137 C1orf115Q9H7X2 142 aa17.21■□□□□ 0.35
VRK3-219ENST00000600137 ZNF277Q9NRM2 450 aaPredicted RBP17.21■□□□□ 0.35
VRK3-219ENST00000600137 DDX19BQ9UMR2 479 aa17.21■□□□□ 0.35
VRK3-219ENST00000600137 NSFL1CQ9UNZ2 370 aaKnown RBP17.21■□□□□ 0.35
VRK3-219ENST00000600137 A0A1B0GUL6 1792 aa17.2■□□□□ 0.34
VRK3-219ENST00000600137 LRRC24Q50LG9 513 aa17.2■□□□□ 0.34
VRK3-219ENST00000600137 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
VRK3-219ENST00000600137 TBC1D16Q8TBP0 767 aa17.2■□□□□ 0.34
VRK3-219ENST00000600137 MPHOSPH8Q99549 860 aa17.2■□□□□ 0.34
VRK3-219ENST00000600137 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
VRK3-219ENST00000600137 ATP8B2P98198 1209 aa17.19■□□□□ 0.34
VRK3-219ENST00000600137 CHRNDQ07001 517 aa17.19■□□□□ 0.34
VRK3-219ENST00000600137 POLA2Q14181 598 aa17.19■□□□□ 0.34
VRK3-219ENST00000600137 LDHAL6AQ6ZMR3 332 aa17.19■□□□□ 0.34
VRK3-219ENST00000600137 ATG9AQ7Z3C6 839 aa17.19■□□□□ 0.34
VRK3-219ENST00000600137 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
VRK3-219ENST00000600137 SNAP23O00161 211 aa17.18■□□□□ 0.34
VRK3-219ENST00000600137 IARSP41252 1262 aaKnown RBP17.18■□□□□ 0.34
VRK3-219ENST00000600137 SSH3Q8TE77 659 aa17.18■□□□□ 0.34
VRK3-219ENST00000600137 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
VRK3-219ENST00000600137 PA2G4Q9UQ80 394 aaKnown RBP17.18■□□□□ 0.34
VRK3-219ENST00000600137 XDHP47989 1333 aa17.18■□□□□ 0.34
VRK3-219ENST00000600137 IRS2Q9Y4H2 1338 aa17.18■□□□□ 0.34
VRK3-219ENST00000600137 SRGAP3O43295 1099 aa17.17■□□□□ 0.34
VRK3-219ENST00000600137 KIAA2012Q0VF49 1180 aa17.17■□□□□ 0.34
VRK3-219ENST00000600137 CEP85Q6P2H3 762 aa17.17■□□□□ 0.34
VRK3-219ENST00000600137 SIRT2Q8IXJ6 389 aa17.17■□□□□ 0.34
VRK3-219ENST00000600137 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
VRK3-219ENST00000600137 HELBQ8NG08 1087 aaPredicted RBP17.17■□□□□ 0.34
VRK3-219ENST00000600137 GPR101Q96P66 508 aaPredicted RBP17.17■□□□□ 0.34
VRK3-219ENST00000600137 VPS33BQ9H267 617 aa17.17■□□□□ 0.34
VRK3-219ENST00000600137 EYA2O00167 538 aa17.16■□□□□ 0.34
VRK3-219ENST00000600137 TAF5LO75529 589 aa17.16■□□□□ 0.34
VRK3-219ENST00000600137 SUPT20HQ8NEM7 779 aa17.16■□□□□ 0.34
VRK3-219ENST00000600137 TMX4Q9H1E5 349 aaPredicted RBP17.16■□□□□ 0.34
VRK3-219ENST00000600137 ANKIB1Q9P2G1 1089 aa17.16■□□□□ 0.34
VRK3-219ENST00000600137 ATP2B4P23634 1241 aa17.15■□□□□ 0.34
VRK3-219ENST00000600137 AOC3Q16853 763 aa17.15■□□□□ 0.34
VRK3-219ENST00000600137 TAF7LQ5H9L4 462 aa17.15■□□□□ 0.34
VRK3-219ENST00000600137 TXNRD3Q86VQ6 643 aa17.15■□□□□ 0.34
VRK3-219ENST00000600137 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
VRK3-219ENST00000600137 ANKRD2Q9GZV1 360 aa17.15■□□□□ 0.34
VRK3-219ENST00000600137 CNNM1Q9NRU3 951 aa17.15■□□□□ 0.34
VRK3-219ENST00000600137 GGA1Q9UJY5 639 aa17.15■□□□□ 0.34
VRK3-219ENST00000600137 FBXO3Q9UK99 471 aa17.15■□□□□ 0.34
VRK3-219ENST00000600137 LEMD3Q9Y2U8 911 aa17.15■□□□□ 0.34
VRK3-219ENST00000600137 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
VRK3-219ENST00000600137 FZD9O00144 591 aa17.14■□□□□ 0.33
VRK3-219ENST00000600137 UFL1O94874 794 aa17.14■□□□□ 0.33
VRK3-219ENST00000600137 KLRK1P26718 216 aa17.14■□□□□ 0.33
VRK3-219ENST00000600137 WASHC4Q2M389 1173 aa17.14■□□□□ 0.33
VRK3-219ENST00000600137 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.14■□□□□ 0.33
VRK3-219ENST00000600137 PPIP5K2O43314 1243 aa17.13■□□□□ 0.33
VRK3-219ENST00000600137 CIAO1O76071 339 aa17.13■□□□□ 0.33
VRK3-219ENST00000600137 ZNF804BA4D1E1 1349 aa17.13■□□□□ 0.33
VRK3-219ENST00000600137 TIAM2Q8IVF5 1701 aa17.13■□□□□ 0.33
VRK3-219ENST00000600137 YDJCA8MPS7 323 aa17.12■□□□□ 0.33
VRK3-219ENST00000600137 RIMBP2O15034 1052 aa17.12■□□□□ 0.33
VRK3-219ENST00000600137 PDE8BO95263 885 aa17.12■□□□□ 0.33
VRK3-219ENST00000600137 C15orf52Q6ZUT6 534 aaKnown RBP17.12■□□□□ 0.33
VRK3-219ENST00000600137 RPAP2Q8IXW5 612 aaPredicted RBP17.12■□□□□ 0.33
VRK3-219ENST00000600137 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
VRK3-219ENST00000600137 SIL1Q9H173 461 aa17.12■□□□□ 0.33
VRK3-219ENST00000600137 NOP58Q9Y2X3 529 aaKnown RBP17.12■□□□□ 0.33
VRK3-219ENST00000600137 MROH5Q6ZUA9 1318 aa17.12■□□□□ 0.33
VRK3-219ENST00000600137 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
VRK3-219ENST00000600137 FGFR2P21802 821 aa17.11■□□□□ 0.33
VRK3-219ENST00000600137 YY1P25490 414 aa17.11■□□□□ 0.33
VRK3-219ENST00000600137 UBE4AQ14139 1066 aa17.11■□□□□ 0.33
VRK3-219ENST00000600137 EYA3Q99504 573 aa17.11■□□□□ 0.33
VRK3-219ENST00000600137 ZC3H12CQ9C0D7 883 aaKnown RBP17.11■□□□□ 0.33
VRK3-219ENST00000600137 CHMP4BQ9H444 224 aaKnown RBP17.11■□□□□ 0.33
VRK3-219ENST00000600137 PCDHB15Q9Y5E8 787 aa17.11■□□□□ 0.33
VRK3-219ENST00000600137 MED23Q9ULK4 1368 aa17.11■□□□□ 0.33
VRK3-219ENST00000600137 SCN9AQ15858 1988 aa17.11■□□□□ 0.33
VRK3-219ENST00000600137 SASH1O94885 1247 aa17.1■□□□□ 0.33
VRK3-219ENST00000600137 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
VRK3-219ENST00000600137 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
VRK3-219ENST00000600137 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
VRK3-219ENST00000600137 METTL24Q5JXM2 366 aa17.09■□□□□ 0.33
VRK3-219ENST00000600137 ZNRF3Q9ULT6 936 aa17.09■□□□□ 0.33
VRK3-219ENST00000600137 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
VRK3-219ENST00000600137 GLTPD2A6NH11 291 aa17.08■□□□□ 0.32
VRK3-219ENST00000600137 CXCL9Q07325 125 aa17.08■□□□□ 0.32
VRK3-219ENST00000600137 EXOC6Q8TAG9 804 aa17.08■□□□□ 0.32
VRK3-219ENST00000600137 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
VRK3-219ENST00000600137 DBNDD1Q9H9R9 158 aa17.08■□□□□ 0.32
VRK3-219ENST00000600137 POTECB2RU33 542 aa17.07■□□□□ 0.32
VRK3-219ENST00000600137 ECE2O60344 883 aa17.07■□□□□ 0.32
VRK3-219ENST00000600137 TFCP2Q12800 502 aa17.07■□□□□ 0.32
VRK3-219ENST00000600137 NIM1KQ8IY84 436 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms