RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 DEFB132Q7Z7B7 95 aa18.49■□□□□ 0.55
VRK3-218ENST00000600031 TBC1D32Q96NH3 1257 aa18.49■□□□□ 0.55
VRK3-218ENST00000600031 NLRP3Q96P20 1036 aa18.49■□□□□ 0.55
VRK3-218ENST00000600031 A0A1B0GUL7 405 aa18.48■□□□□ 0.55
VRK3-218ENST00000600031 DDR1Q08345 913 aa18.48■□□□□ 0.55
VRK3-218ENST00000600031 SF3B2Q13435 895 aaKnown RBP18.48■□□□□ 0.55
VRK3-218ENST00000600031 CNBD1Q8NA66 436 aa18.48■□□□□ 0.55
VRK3-218ENST00000600031 FLAD1Q8NFF5 587 aa18.48■□□□□ 0.55
VRK3-218ENST00000600031 SERPINB2P05120 415 aa18.47■□□□□ 0.55
VRK3-218ENST00000600031 PRR5LQ6MZQ0 368 aa18.47■□□□□ 0.55
VRK3-218ENST00000600031 VGLL2Q8N8G2 317 aa18.47■□□□□ 0.55
VRK3-218ENST00000600031 MPHOSPH8Q99549 860 aa18.47■□□□□ 0.55
VRK3-218ENST00000600031 BOLA2Q9H3K6 86 aa18.47■□□□□ 0.55
VRK3-218ENST00000600031 TAF1P21675 1872 aa18.47■□□□□ 0.55
VRK3-218ENST00000600031 FRAT2O75474 233 aaPredicted RBP18.47■□□□□ 0.55
VRK3-218ENST00000600031 AKAP2Q9Y2D5 859 aa18.47■□□□□ 0.55
VRK3-218ENST00000600031 IGHMBP2P38935 993 aaKnown RBP18.46■□□□□ 0.55
VRK3-218ENST00000600031 BAG6P46379 1132 aa18.46■□□□□ 0.55
VRK3-218ENST00000600031 CDC5LQ99459 802 aaKnown RBP18.46■□□□□ 0.55
VRK3-218ENST00000600031 SPEF2Q9C093 1822 aa18.46■□□□□ 0.55
VRK3-218ENST00000600031 POLRMTO00411 1230 aaKnown RBP18.46■□□□□ 0.55
VRK3-218ENST00000600031 ATP5JP18859 108 aa18.46■□□□□ 0.55
VRK3-218ENST00000600031 SLC15A2Q16348 729 aa18.46■□□□□ 0.55
VRK3-218ENST00000600031 TNRC6CQ9HCJ0 1690 aaKnown RBP18.46■□□□□ 0.55
VRK3-218ENST00000600031 PDE8BO95263 885 aa18.45■□□□□ 0.54
VRK3-218ENST00000600031 CNTROBQ8N137 903 aa18.45■□□□□ 0.54
VRK3-218ENST00000600031 HELBQ8NG08 1087 aaPredicted RBP18.45■□□□□ 0.54
VRK3-218ENST00000600031 MROH5Q6ZUA9 1318 aa18.45■□□□□ 0.54
VRK3-218ENST00000600031 ADORA1P30542 326 aa18.44■□□□□ 0.54
VRK3-218ENST00000600031 NLGN1Q8N2Q7 840 aa18.44■□□□□ 0.54
VRK3-218ENST00000600031 CELF1Q92879 486 aaKnown RBP18.44■□□□□ 0.54
VRK3-218ENST00000600031 AK9Q5TCS8 1911 aa18.44■□□□□ 0.54
VRK3-218ENST00000600031 CHMLP26374 656 aa18.44■□□□□ 0.54
VRK3-218ENST00000600031 ATP2B3Q16720 1220 aa18.44■□□□□ 0.54
VRK3-218ENST00000600031 ANKRD18AQ8IVF6 992 aa18.44■□□□□ 0.54
VRK3-218ENST00000600031 XAGE2Q96GT9 111 aa18.44■□□□□ 0.54
VRK3-218ENST00000600031 CASC1Q6TDU7 716 aa18.43■□□□□ 0.54
VRK3-218ENST00000600031 STK32BQ9NY57 414 aa18.43■□□□□ 0.54
VRK3-218ENST00000600031 TAF5LO75529 589 aa18.42■□□□□ 0.54
VRK3-218ENST00000600031 ST5P78524 1137 aa18.41■□□□□ 0.54
VRK3-218ENST00000600031 EVI5LQ96CN4 794 aa18.41■□□□□ 0.54
VRK3-218ENST00000600031 EDC3Q96F86 508 aaKnown RBP18.41■□□□□ 0.54
VRK3-218ENST00000600031 BSDC1Q9NW68 430 aaPredicted RBP18.41■□□□□ 0.54
VRK3-218ENST00000600031 NDUFB9Q9Y6M9 179 aa18.41■□□□□ 0.54
VRK3-218ENST00000600031 SNAP23O00161 211 aa18.41■□□□□ 0.54
VRK3-218ENST00000600031 FGFR2P21802 821 aa18.41■□□□□ 0.54
VRK3-218ENST00000600031 RPS8P62241 208 aaKnown RBP18.41■□□□□ 0.54
VRK3-218ENST00000600031 CHRNDQ07001 517 aa18.41■□□□□ 0.54
VRK3-218ENST00000600031 MSL1Q68DK7 614 aa18.41■□□□□ 0.54
VRK3-218ENST00000600031 PUM3Q15397 648 aaKnown RBP18.4■□□□□ 0.54
VRK3-218ENST00000600031 DDX46Q7L014 1031 aaKnown RBP18.4■□□□□ 0.54
VRK3-218ENST00000600031 HAUS7Q99871 368 aa18.4■□□□□ 0.54
VRK3-218ENST00000600031 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
VRK3-218ENST00000600031 GORABQ5T7V8 394 aa18.4■□□□□ 0.54
VRK3-218ENST00000600031 IL27Q8NEV9 243 aa18.4■□□□□ 0.54
VRK3-218ENST00000600031 ESYT1Q9BSJ8 1104 aa18.4■□□□□ 0.54
VRK3-218ENST00000600031 MMP10P09238 476 aa18.39■□□□□ 0.53
VRK3-218ENST00000600031 CCDC158Q5M9N0 1113 aa18.39■□□□□ 0.53
VRK3-218ENST00000600031 LPIN2Q92539 896 aa18.39■□□□□ 0.53
VRK3-218ENST00000600031 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.53
VRK3-218ENST00000600031 ANTXR1Q9H6X2 564 aa18.39■□□□□ 0.53
VRK3-218ENST00000600031 MINPP1Q9UNW1 487 aa18.39■□□□□ 0.53
VRK3-218ENST00000600031 IFIT1P09914 478 aaKnown RBP18.38■□□□□ 0.53
VRK3-218ENST00000600031 CRY2Q49AN0 593 aa18.38■□□□□ 0.53
VRK3-218ENST00000600031 TTC39AQ5SRH9 613 aa18.38■□□□□ 0.53
VRK3-218ENST00000600031 TBC1D2Q9BYX2 928 aa18.38■□□□□ 0.53
VRK3-218ENST00000600031 IL25Q9H293 177 aa18.38■□□□□ 0.53
VRK3-218ENST00000600031 QSER1Q2KHR3 1735 aa18.37■□□□□ 0.53
VRK3-218ENST00000600031 NRXN2Q9P2S2 1712 aa18.37■□□□□ 0.53
VRK3-218ENST00000600031 SCARF1Q14162 830 aa18.37■□□□□ 0.53
VRK3-218ENST00000600031 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.37■□□□□ 0.53
VRK3-218ENST00000600031 A0A1B0GUL6 1792 aa18.36■□□□□ 0.53
VRK3-218ENST00000600031 EIF5BO60841 1220 aaKnown RBP18.36■□□□□ 0.53
VRK3-218ENST00000600031 SLC5A1P13866 664 aa18.36■□□□□ 0.53
VRK3-218ENST00000600031 GRAPQ13588 217 aa18.36■□□□□ 0.53
VRK3-218ENST00000600031 CCDC125Q86Z20 511 aa18.36■□□□□ 0.53
VRK3-218ENST00000600031 GRAPLQ8TC17 118 aaPredicted RBP18.36■□□□□ 0.53
VRK3-218ENST00000600031 FSD1Q9BTV5 496 aa18.36■□□□□ 0.53
VRK3-218ENST00000600031 PDGFDQ9GZP0 370 aaPredicted RBP18.36■□□□□ 0.53
VRK3-218ENST00000600031 PARP3Q9Y6F1 533 aa18.36■□□□□ 0.53
VRK3-218ENST00000600031 WTIPA6NIX2 430 aaPredicted RBP18.35■□□□□ 0.53
VRK3-218ENST00000600031 RBM25P49756 843 aaKnown RBP18.35■□□□□ 0.53
VRK3-218ENST00000600031 RPGRQ92834 1020 aaKnown RBP18.35■□□□□ 0.53
VRK3-218ENST00000600031 USP26Q9BXU7 913 aa18.35■□□□□ 0.53
VRK3-218ENST00000600031 SLKQ9H2G2 1235 aaPredicted RBP18.35■□□□□ 0.53
VRK3-218ENST00000600031 ARAP2Q8WZ64 1704 aa18.35■□□□□ 0.53
VRK3-218ENST00000600031 KLRG2A4D1S0 409 aaPredicted RBP18.35■□□□□ 0.53
VRK3-218ENST00000600031 GOLIM4O00461 696 aa18.35■□□□□ 0.53
VRK3-218ENST00000600031 PHKA1P46020 1223 aa18.35■□□□□ 0.53
VRK3-218ENST00000600031 CCDC102BQ68D86 513 aa18.35■□□□□ 0.53
VRK3-218ENST00000600031 CWC27Q6UX04 472 aaKnown RBP18.35■□□□□ 0.53
VRK3-218ENST00000600031 DIAPH3Q9NSV4 1193 aa18.35■□□□□ 0.53
VRK3-218ENST00000600031 PAG1Q9NWQ8 432 aa18.35■□□□□ 0.53
VRK3-218ENST00000600031 ANKRD31Q8N7Z5 1873 aa18.35■□□□□ 0.53
VRK3-218ENST00000600031 REC8O95072 547 aa18.34■□□□□ 0.53
VRK3-218ENST00000600031 SNRKQ9NRH2 765 aa18.34■□□□□ 0.53
VRK3-218ENST00000600031 SGSM2O43147 1006 aa18.34■□□□□ 0.53
VRK3-218ENST00000600031 FKBP4Q02790 459 aaKnown RBP eCLIP18.34■□□□□ 0.53
VRK3-218ENST00000600031 SLC51AQ86UW1 340 aa18.34■□□□□ 0.53
VRK3-218ENST00000600031 BRIP1Q9BX63 1249 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms