RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 PCDHB15Q9Y5E8 787 aa23.59■■□□□ 1.37
COPE-209ENST00000599964 MROH5Q6ZUA9 1318 aa23.59■■□□□ 1.37
COPE-209ENST00000599964 SURF6O75683 361 aaKnown RBP23.58■■□□□ 1.37
COPE-209ENST00000599964 SIRT2Q8IXJ6 389 aa23.58■■□□□ 1.37
COPE-209ENST00000599964 RTKN2Q8IZC4 609 aa23.58■■□□□ 1.37
COPE-209ENST00000599964 SIL1Q9H173 461 aa23.58■■□□□ 1.37
COPE-209ENST00000599964 PA2G4Q9UQ80 394 aaKnown RBP23.58■■□□□ 1.37
COPE-209ENST00000599964 LRRC37AA6NMS7 1700 aa23.58■■□□□ 1.37
COPE-209ENST00000599964 COL4A1P02462 1669 aa23.57■■□□□ 1.36
COPE-209ENST00000599964 IL15P40933 162 aaPredicted RBP23.57■■□□□ 1.36
COPE-209ENST00000599964 OS9Q13438 667 aaPredicted RBP23.57■■□□□ 1.36
COPE-209ENST00000599964 ANKIB1Q9P2G1 1089 aa23.57■■□□□ 1.36
COPE-209ENST00000599964 MINPP1Q9UNW1 487 aa23.57■■□□□ 1.36
COPE-209ENST00000599964 ERICH6BQ5W0A0 696 aa23.56■■□□□ 1.36
COPE-209ENST00000599964 MPNDQ8N594 471 aa23.56■■□□□ 1.36
COPE-209ENST00000599964 PUS3Q9BZE2 481 aaKnown RBP23.56■■□□□ 1.36
COPE-209ENST00000599964 RWDD1Q9H446 243 aaPredicted RBP23.56■■□□□ 1.36
COPE-209ENST00000599964 NOP58Q9Y2X3 529 aaKnown RBP23.56■■□□□ 1.36
COPE-209ENST00000599964 RIPOR2Q9Y4F9 1068 aa23.56■■□□□ 1.36
COPE-209ENST00000599964 XDHP47989 1333 aa23.56■■□□□ 1.36
COPE-209ENST00000599964 GRIN3BO60391 1043 aa23.55■■□□□ 1.36
COPE-209ENST00000599964 CHRNDQ07001 517 aa23.55■■□□□ 1.36
COPE-209ENST00000599964 LRRC24Q50LG9 513 aa23.55■■□□□ 1.36
COPE-209ENST00000599964 METTL24Q5JXM2 366 aa23.55■■□□□ 1.36
COPE-209ENST00000599964 DPP8Q6V1X1 898 aaPredicted RBP23.55■■□□□ 1.36
COPE-209ENST00000599964 ERC1Q8IUD2 1116 aa23.55■■□□□ 1.36
COPE-209ENST00000599964 NSFL1CQ9UNZ2 370 aaKnown RBP23.55■■□□□ 1.36
COPE-209ENST00000599964 HDAC1Q13547 482 aaPredicted RBP23.54■■□□□ 1.36
COPE-209ENST00000599964 SUPT20HQ8NEM7 779 aa23.54■■□□□ 1.36
COPE-209ENST00000599964 PODXL2Q9NZ53 605 aa23.54■■□□□ 1.36
COPE-209ENST00000599964 SRCAPQ6ZRS2 3230 aa23.53■■□□□ 1.36
COPE-209ENST00000599964 CEP126Q9P2H0 1117 aa23.53■■□□□ 1.36
COPE-209ENST00000599964 YBX3P16989 372 aaKnown RBP eCLIP23.52■■□□□ 1.361e-9■□□□□ 9.4
COPE-209ENST00000599964 ATP2B4P23634 1241 aa23.52■■□□□ 1.36
COPE-209ENST00000599964 KCNJ4P48050 445 aa23.52■■□□□ 1.36
COPE-209ENST00000599964 GPSM2P81274 684 aa23.52■■□□□ 1.36
COPE-209ENST00000599964 OLFM4Q6UX06 510 aa23.52■■□□□ 1.36
COPE-209ENST00000599964 ARHGAP27Q6ZUM4 889 aa23.52■■□□□ 1.36
COPE-209ENST00000599964 ATG9AQ7Z3C6 839 aa23.52■■□□□ 1.36
COPE-209ENST00000599964 GGA1Q9UJY5 639 aa23.52■■□□□ 1.36
COPE-209ENST00000599964 LEMD3Q9Y2U8 911 aa23.52■■□□□ 1.36
COPE-209ENST00000599964 RAB11FIP3O75154 756 aa23.51■■□□□ 1.35
COPE-209ENST00000599964 PSMD1Q99460 953 aa23.51■■□□□ 1.35
COPE-209ENST00000599964 EXOC6BQ9Y2D4 811 aa23.51■■□□□ 1.35
COPE-209ENST00000599964 C6orf229H3BNL8 230 aa23.5■■□□□ 1.35
COPE-209ENST00000599964 PDE8BO95263 885 aa23.5■■□□□ 1.35
COPE-209ENST00000599964 FKBP4Q02790 459 aaKnown RBP eCLIP23.5■■□□□ 1.35
COPE-209ENST00000599964 HELBQ8NG08 1087 aaPredicted RBP23.5■■□□□ 1.35
COPE-209ENST00000599964 EYA3Q99504 573 aa23.5■■□□□ 1.35
COPE-209ENST00000599964 TAOK3Q9H2K8 898 aa23.5■■□□□ 1.35
COPE-209ENST00000599964 UFL1O94874 794 aa23.49■■□□□ 1.35
COPE-209ENST00000599964 GCC1Q96CN9 775 aa23.49■■□□□ 1.35
COPE-209ENST00000599964 DCTPP1Q9H773 170 aa23.49■■□□□ 1.35
COPE-209ENST00000599964 AKAP2Q9Y2D5 859 aa23.49■■□□□ 1.35
COPE-209ENST00000599964 LTBP3Q9NS15 1303 aa23.49■■□□□ 1.35
COPE-209ENST00000599964 FER1L6Q2WGJ9 1857 aa23.48■■□□□ 1.35
COPE-209ENST00000599964 TAF5LO75529 589 aa23.48■■□□□ 1.35
COPE-209ENST00000599964 PUM3Q15397 648 aaKnown RBP23.48■■□□□ 1.35
COPE-209ENST00000599964 TBC1D16Q8TBP0 767 aa23.48■■□□□ 1.35
COPE-209ENST00000599964 KIF1BPQ96EK5 621 aa23.48■■□□□ 1.35
COPE-209ENST00000599964 RTFDC1Q9BY42 306 aaPredicted RBP23.48■■□□□ 1.35
COPE-209ENST00000599964 VPS33BQ9H267 617 aa23.48■■□□□ 1.35
COPE-209ENST00000599964 ZNF804BA4D1E1 1349 aa23.48■■□□□ 1.35
COPE-209ENST00000599964 SNED1Q8TER0 1413 aa23.48■■□□□ 1.35
COPE-209ENST00000599964 A0A1B0GUL6 1792 aa23.47■■□□□ 1.35
COPE-209ENST00000599964 TFCP2Q12800 502 aa23.47■■□□□ 1.35
COPE-209ENST00000599964 UBE4AQ14139 1066 aa23.47■■□□□ 1.35
COPE-209ENST00000599964 ZBTB47Q9UFB7 747 aaPredicted RBP23.47■■□□□ 1.35
COPE-209ENST00000599964 LTBP1Q14766 1721 aa23.46■■□□□ 1.35
COPE-209ENST00000599964 SLC51AQ86UW1 340 aa23.46■■□□□ 1.35
COPE-209ENST00000599964 VGLL2Q8N8G2 317 aa23.46■■□□□ 1.35
COPE-209ENST00000599964 APBB1O00213 710 aa23.45■■□□□ 1.34
COPE-209ENST00000599964 NFKBIEO00221 500 aa23.45■■□□□ 1.34
COPE-209ENST00000599964 SASH1O94885 1247 aa23.45■■□□□ 1.34
COPE-209ENST00000599964 IFIT1P09914 478 aaKnown RBP23.45■■□□□ 1.34
COPE-209ENST00000599964 WASHC4Q2M389 1173 aa23.45■■□□□ 1.34
COPE-209ENST00000599964 LRRCC1Q9C099 1032 aa23.45■■□□□ 1.34
COPE-209ENST00000599964 ZC3H12CQ9C0D7 883 aaKnown RBP23.45■■□□□ 1.34
COPE-209ENST00000599964 GPR108Q9NPR9 543 aa23.45■■□□□ 1.34
COPE-209ENST00000599964 POLLQ9UGP5 575 aa23.45■■□□□ 1.34
COPE-209ENST00000599964 SLC5A1P13866 664 aa23.44■■□□□ 1.34
COPE-209ENST00000599964 ATP2B3Q16720 1220 aa23.44■■□□□ 1.34
COPE-209ENST00000599964 RHPN1Q8TCX5 695 aa23.44■■□□□ 1.34
COPE-209ENST00000599964 LPIN2Q92539 896 aa23.44■■□□□ 1.34
COPE-209ENST00000599964 DUOX1Q9NRD9 1551 aa23.44■■□□□ 1.34
COPE-209ENST00000599964 CLASRPQ8N2M8 674 aaKnown RBP23.43■■□□□ 1.34
COPE-209ENST00000599964 CCDC136Q96JN2 1154 aa23.43■■□□□ 1.34
COPE-209ENST00000599964 MED23Q9ULK4 1368 aa23.42■■□□□ 1.34
COPE-209ENST00000599964 G3V3G9 751 aa23.42■■□□□ 1.34
COPE-209ENST00000599964 IGHDP01880 384 aa23.42■■□□□ 1.34
COPE-209ENST00000599964 RASSF7Q02833 373 aa23.42■■□□□ 1.34
COPE-209ENST00000599964 DCAF8Q5TAQ9 597 aa23.42■■□□□ 1.34
COPE-209ENST00000599964 PPIP5K2O43314 1243 aa23.41■■□□□ 1.34
COPE-209ENST00000599964 LMNB1P20700 586 aa23.41■■□□□ 1.34
COPE-209ENST00000599964 FGFR2P21802 821 aa23.41■■□□□ 1.34
COPE-209ENST00000599964 IARSP41252 1262 aaKnown RBP23.41■■□□□ 1.34
COPE-209ENST00000599964 KIAA2012Q0VF49 1180 aa23.41■■□□□ 1.34
COPE-209ENST00000599964 CAVIN4Q5BKX8 364 aa23.41■■□□□ 1.34
COPE-209ENST00000599964 C15orf52Q6ZUT6 534 aaKnown RBP23.41■■□□□ 1.34
COPE-209ENST00000599964 LARGE2Q8N3Y3 721 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms