RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 ADGRB3O60242 1522 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 CCDC194A0A1B0GVG4 234 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 SYCE3A1L190 88 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 TSPY3P0CV98 308 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 TSPY8P0CW00 308 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 ESR2Q92731 530 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 GRPEL1Q9HAV7 217 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 STX8Q9UNK0 236 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 JAG2Q9Y219 1238 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 POLD1P28340 1107 aa17.17■□□□□ 0.34
SYMPK-213ENST00000599460 FAM43AQ8N2R8 423 aa17.16■□□□□ 0.34
SYMPK-213ENST00000599460 Q6ZUG5 572 aa17.16■□□□□ 0.34
SYMPK-213ENST00000599460 FEZ1Q99689 392 aa17.16■□□□□ 0.34
SYMPK-213ENST00000599460 HDAC9Q9UKV0 1011 aa17.16■□□□□ 0.34
SYMPK-213ENST00000599460 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
SYMPK-213ENST00000599460 CT47A1Q5JQC4 288 aaPredicted RBP17.16■□□□□ 0.34
SYMPK-213ENST00000599460 STK32BQ9NY57 414 aa17.16■□□□□ 0.34
SYMPK-213ENST00000599460 CUL5Q93034 780 aa17.16■□□□□ 0.34
SYMPK-213ENST00000599460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.34
SYMPK-213ENST00000599460 NEURL1BA8MQ27 555 aa17.15■□□□□ 0.34
SYMPK-213ENST00000599460 GNAT2P19087 354 aa17.15■□□□□ 0.34
SYMPK-213ENST00000599460 PUM3Q15397 648 aaKnown RBP17.15■□□□□ 0.34
SYMPK-213ENST00000599460 IFIT1BQ5T764 474 aaKnown RBP17.15■□□□□ 0.34
SYMPK-213ENST00000599460 OGFOD1Q8N543 542 aa17.15■□□□□ 0.34
SYMPK-213ENST00000599460 DBNDD2Q9BQY9 259 aa17.15■□□□□ 0.34
SYMPK-213ENST00000599460 TANGO6Q9C0B7 1094 aa17.15■□□□□ 0.34
SYMPK-213ENST00000599460 ZBTB43O43298 467 aa17.15■□□□□ 0.34
SYMPK-213ENST00000599460 TFIP11Q9UBB9 837 aaKnown RBP17.15■□□□□ 0.34
SYMPK-213ENST00000599460 CAMSAP1Q5T5Y3 1602 aa17.15■□□□□ 0.34
SYMPK-213ENST00000599460 TTLL5Q6EMB2 1281 aa17.14■□□□□ 0.34
SYMPK-213ENST00000599460 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
SYMPK-213ENST00000599460 ABCC4O15439 1325 aa17.14■□□□□ 0.33
SYMPK-213ENST00000599460 XAGE2Q96GT9 111 aa17.14■□□□□ 0.33
SYMPK-213ENST00000599460 GDPD2Q9HCC8 539 aa17.14■□□□□ 0.33
SYMPK-213ENST00000599460 CCDC12Q8WUD4 166 aaPredicted RBP17.14■□□□□ 0.33
SYMPK-213ENST00000599460 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
SYMPK-213ENST00000599460 WDR17Q8IZU2 1322 aa17.14■□□□□ 0.33
SYMPK-213ENST00000599460 LDHBP07195 334 aaKnown RBP17.14■□□□□ 0.33
SYMPK-213ENST00000599460 TCIRG1Q13488 830 aa17.14■□□□□ 0.33
SYMPK-213ENST00000599460 CREB3L3Q68CJ9 461 aa17.14■□□□□ 0.33
SYMPK-213ENST00000599460 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.14■□□□□ 0.33
SYMPK-213ENST00000599460 EYA3Q99504 573 aa17.14■□□□□ 0.33
SYMPK-213ENST00000599460 ERBB3P21860 1342 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 BRINP3Q76B58 766 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 TMTC2Q8N394 836 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 CCDC24Q8N4L8 307 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 TNIP1Q15025 636 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 DIP2CQ9Y2E4 1556 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 CLTCQ00610 1675 aaKnown RBP17.13■□□□□ 0.33
SYMPK-213ENST00000599460 KIF24Q5T7B8 1368 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 APBA3O96018 575 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 WWC2Q6AWC2 1192 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 DENND2AQ9ULE3 1009 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 KDRP35968 1356 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 PRC1O43663 620 aa17.13■□□□□ 0.33
SYMPK-213ENST00000599460 RAD50Q92878 1312 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
SYMPK-213ENST00000599460 LMTK2Q8IWU2 1503 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 DHX8Q14562 1220 aaKnown RBP17.12■□□□□ 0.33
SYMPK-213ENST00000599460 CCDC183Q5T5S1 534 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 PPFIBP1Q86W92 1011 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 MPNDQ8N594 471 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 UFL1O94874 794 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 TTLL7Q6ZT98 887 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 MADDQ8WXG6 1647 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 CBFA2T2O43439 604 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 TAF5LO75529 589 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 CCDC178Q5BJE1 867 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 MCM9Q9NXL9 1143 aa17.12■□□□□ 0.33
SYMPK-213ENST00000599460 HELLSQ9NRZ9 838 aa17.11■□□□□ 0.33
SYMPK-213ENST00000599460 SMTNL1A8MU46 457 aa17.11■□□□□ 0.33
SYMPK-213ENST00000599460 KDM2BQ8NHM5 1336 aa17.11■□□□□ 0.33
SYMPK-213ENST00000599460 CHST3Q7LGC8 479 aa17.11■□□□□ 0.33
SYMPK-213ENST00000599460 RTN1Q16799 776 aa17.11■□□□□ 0.33
SYMPK-213ENST00000599460 MNS1Q8NEH6 495 aa17.11■□□□□ 0.33
SYMPK-213ENST00000599460 HIBADHP31937 336 aaKnown RBP17.11■□□□□ 0.33
SYMPK-213ENST00000599460 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
SYMPK-213ENST00000599460 USP44Q9H0E7 712 aa17.11■□□□□ 0.33
SYMPK-213ENST00000599460 ZNHIT6Q9NWK9 470 aaKnown RBP17.11■□□□□ 0.33
SYMPK-213ENST00000599460 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
SYMPK-213ENST00000599460 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
SYMPK-213ENST00000599460 RAB34Q9BZG1 259 aa17.1■□□□□ 0.33
SYMPK-213ENST00000599460 SEC24BO95487 1268 aa17.1■□□□□ 0.33
SYMPK-213ENST00000599460 CDC42BPGQ6DT37 1551 aa17.1■□□□□ 0.33
SYMPK-213ENST00000599460 PLCG2P16885 1265 aa17.1■□□□□ 0.33
SYMPK-213ENST00000599460 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
SYMPK-213ENST00000599460 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
SYMPK-213ENST00000599460 INO80Q9ULG1 1556 aaPredicted RBP17.1■□□□□ 0.33
SYMPK-213ENST00000599460 MBD4O95243 580 aa17.1■□□□□ 0.33
SYMPK-213ENST00000599460 FSIP1Q8NA03 581 aa17.1■□□□□ 0.33
SYMPK-213ENST00000599460 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
SYMPK-213ENST00000599460 BAG4O95429 457 aaKnown RBP17.09■□□□□ 0.33
SYMPK-213ENST00000599460 ODF2Q5BJF6 829 aa17.09■□□□□ 0.33
SYMPK-213ENST00000599460 ZSCAN22P10073 491 aaPredicted RBP17.09■□□□□ 0.33
SYMPK-213ENST00000599460 SNX21Q969T3 373 aa17.09■□□□□ 0.33
SYMPK-213ENST00000599460 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
SYMPK-213ENST00000599460 WDR78Q5VTH9 848 aa17.09■□□□□ 0.33
SYMPK-213ENST00000599460 CCDC129Q6ZRS4 1044 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms